Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6p12
         (608 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.4  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   5.4  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   5.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.4  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   7.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.4  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
 Frame = +1

Query: 226 NHGQKR---RESNDNTSTLACGTSSGSGRPARTTSVSCI 333
           NH  KR   RESN N   L    + G+   A T    C+
Sbjct: 450 NHEYKRSVSRESNSNQFILMTTVNEGNNNMAATYMNECL 488


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 57  LKKLYKPMHVFLLSANY 7
           +KK Y  +  +LL+ANY
Sbjct: 188 MKKTYNNIDYYLLAANY 204


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 232 HGLNCIYNFGFWDQDHSNFNKTLF 161
           H  N  YN+   + +++N+NK L+
Sbjct: 90  HNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 232 HGLNCIYNFGFWDQDHSNFNKTLF 161
           H  N  YN+   + +++N+NK L+
Sbjct: 90  HNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 377 SVTSTSRLVVNHYILMQDTDVVLAGL 300
           +V+S  R     Y L   TD+VLAGL
Sbjct: 18  TVSSGERDTRTEYYLPNWTDLVLAGL 43


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 57  LKKLYKPMHVFLLSANY 7
           +KK Y  +  +LL+ANY
Sbjct: 188 MKKTYNNIDYYLLAANY 204


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 498 FKLNLWAVPIMLESVLKCWTKTG 566
           F +NL  +  M++ VLK   K G
Sbjct: 112 FDINLLGLTCMIQEVLKLMKKKG 134


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -3

Query: 429 PRPAFCICATFFAISLTICNLHFSAC--GKSL 340
           PR    +CA+   I    C LH +AC  G SL
Sbjct: 111 PRRHRPVCASNGKIYANHCELHRAACHSGSSL 142


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 410 IQNAGLGEFRIRDLND 457
           +Q   L E R+RD+ND
Sbjct: 173 LQTLNLTENRLRDIND 188


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 432 SPRPAFCICATFFAISLTIC 373
           SPR A  + AT + +S  IC
Sbjct: 178 SPRRARLLVATVWILSFVIC 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,267
Number of Sequences: 438
Number of extensions: 4178
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)