Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6p05
         (629 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0082 + 20749425-20749589,20750137-20750238,20750320-207503...    29   2.3  
04_03_0357 + 14852584-14853058,14853116-14855754                       28   7.0  

>09_06_0082 +
           20749425-20749589,20750137-20750238,20750320-20750384,
           20750471-20750588,20750937-20751012,20751304-20751365,
           20751457-20751588,20751686-20751739,20751969-20752034,
           20752115-20752189,20752271-20752321
          Length = 321

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +2

Query: 77  RKERVKKRVLIGQMMKRMITNPLSTIQQMFHQSQLNLQKRKKGKVR 214
           R++ V+KRV I   ++      L  +QQ   + +L +QKRKK +VR
Sbjct: 83  REQYVEKRVNIRTKIEEEEKEKLQKLQQ--EEEELQMQKRKKRRVR 126


>04_03_0357 + 14852584-14853058,14853116-14855754
          Length = 1037

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 457  DEDSDKELKIEASEDDE 507
            DEDSD E  +E+ EDDE
Sbjct: 951  DEDSDSESLVESDEDDE 967


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.297    0.121    0.309 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,428,287
Number of Sequences: 37544
Number of extensions: 162849
Number of successful extensions: 265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.9 bits)