Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6p05
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023811-1|AAZ66318.1|  971|Drosophila melanogaster LP23835p pro...    29   5.2  
AE013599-3891|AAF47220.2|  947|Drosophila melanogaster CG30169-P...    29   5.2  
X05136-1|CAA28782.1|  590|Drosophila melanogaster protein ( Dros...    29   6.9  
M13373-1|AAA28375.1|  427|Drosophila melanogaster protein ( D.me...    29   6.9  
AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA ...    29   6.9  
AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain ...    29   6.9  

>BT023811-1|AAZ66318.1|  971|Drosophila melanogaster LP23835p
           protein.
          Length = 971

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +2

Query: 23  FQFQTKRT---SRNRLPKSHKRKERVKKRVLIGQMMKRMITNPLSTIQQMFHQSQLNLQK 193
           F+F+ KR    SR R PKSHK  +  K+R   G  ++R +    +++   F  S   + +
Sbjct: 119 FRFRNKRIRTYSRKRDPKSHKAVQNEKRRGSSGLSVQRDLNTSFTSMACDFDASSQKIHE 178


>AE013599-3891|AAF47220.2|  947|Drosophila melanogaster CG30169-PA
           protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +2

Query: 23  FQFQTKRT---SRNRLPKSHKRKERVKKRVLIGQMMKRMITNPLSTIQQMFHQSQLNLQK 193
           F+F+ KR    SR R PKSHK  +  K+R   G  ++R +    +++   F  S   + +
Sbjct: 119 FRFRNKRIRTYSRKRDPKSHKAVQNEKRRGSSGLSVQRDLNTSFTSMACDFDASSQKIHE 178


>X05136-1|CAA28782.1|  590|Drosophila melanogaster protein (
           Drosophila mRNA forDeformed (Dfd) protein. ).
          Length = 590

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 445 DDLPDEDSDKELKIEASEDDELVIP 519
           DDL D DSD++L  E ++ + ++ P
Sbjct: 321 DDLGDSDSDEDLMAETTDGERIIYP 345


>M13373-1|AAA28375.1|  427|Drosophila melanogaster protein (
           D.melanogaster (ANT-C locus) deformed (Dfd) mRNA with a
           homeo box. ).
          Length = 427

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 445 DDLPDEDSDKELKIEASEDDELVIP 519
           DDL D DSD++L  E ++ + ++ P
Sbjct: 159 DDLGDSDSDEDLMAETTDGERIIYP 183


>AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA
           protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 445 DDLPDEDSDKELKIEASEDDELVIP 519
           DDL D DSD++L  E ++ + ++ P
Sbjct: 321 DDLGDSDSDEDLMAETTDGERIIYP 345


>AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain
           protein protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 445 DDLPDEDSDKELKIEASEDDELVIP 519
           DDL D DSD++L  E ++ + ++ P
Sbjct: 321 DDLGDSDSDEDLMAETTDGERIIYP 345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.297    0.121    0.309 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,099,308
Number of Sequences: 53049
Number of extensions: 320914
Number of successful extensions: 577
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.9 bits)