Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6p04
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical ... 101 3e-22
Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical p... 29 2.9
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin ... 29 2.9
AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like ... 29 2.9
U00050-6|AAM22064.1| 208|Caenorhabditis elegans Hypothetical pr... 29 3.8
U00050-5|AAM22063.1| 291|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical
protein K10C9.3 protein.
Length = 279
Score = 101 bits (243), Expect = 3e-22
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = +1
Query: 205 IFLLSCFTYAELSDTKNNE-WDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGI 381
+ LL C + L+ + + E +D+L+FT +P +CR + SC +P W+IHG+
Sbjct: 3 LLLLLCISCIPLAYSHDGEPFDYLMFTTIYPTAVCRADDDSVPESCEIPSGTPQWSIHGL 62
Query: 382 WPNKNHSMGPFFCNKT-WSFDPDQVKSIETDLEESWGNIEKEQSLYSLWAHEWTKHGTCA 558
WPN + P C T FD + +KSIE L W N+ ++++ S W HE+ KHGTCA
Sbjct: 63 WPNFENGSYPQNCRGTPRHFDENLIKSIEDRLVVVWPNLYPKKTIQSFWKHEYDKHGTCA 122
Query: 559 ASIEPLNCELKYFTK 603
S + EL YFT+
Sbjct: 123 QSEKLFESELAYFTE 137
>Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 320 RNLRTLVLCHTSRIHGLFMVYGQIKITPWDHFSVIRLGHLTLIKL 454
R TL+ H+SR H LFMV I+ +++ G L L+ L
Sbjct: 208 RTAATLMNMHSSRSHSLFMVNVVIRENTTTGEELVKQGKLNLVDL 252
>Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 320 RNLRTLVLCHTSRIHGLFMVYGQIKITPWDHFSVIRLGHLTLIKL 454
R TL+ H+SR H LFMV I+ +++ G L L+ L
Sbjct: 208 RTAATLMNMHSSRSHSLFMVNVVIRENTTTGEELVKQGKLNLVDL 252
>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical
protein F17C11.10 protein.
Length = 1101
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +1
Query: 313 WMEKPTHSCIMPHEQNSWTIHGIWPNKNHSMGPF 414
W+ P+ C+ + +N W G++ K+H+ F
Sbjct: 215 WLFVPSKGCVKSYRRNGWEESGVYRLKDHASVDF 248
>AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin
BMK-1 protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 320 RNLRTLVLCHTSRIHGLFMVYGQIKITPWDHFSVIRLGHLTLIKL 454
R TL+ H+SR H LFMV I+ +++ G L L+ L
Sbjct: 208 RTAATLMNMHSSRSHSLFMVNVVIRENTTTGEELVKQGKLNLVDL 252
>AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like
protein KLP-14 protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 320 RNLRTLVLCHTSRIHGLFMVYGQIKITPWDHFSVIRLGHLTLIKL 454
R TL+ H+SR H LFMV I+ +++ G L L+ L
Sbjct: 208 RTAATLMNMHSSRSHSLFMVNVVIRENTTTGEELVKQGKLNLVDL 252
>U00050-6|AAM22064.1| 208|Caenorhabditis elegans Hypothetical
protein F09F7.7b protein.
Length = 208
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 229 YAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 393
YA++ K +E+D + P +C + E+ S I H+ + W IW N+
Sbjct: 144 YADMLLNKMSEYDVKKLGNYQPFEMCNLEYEEVKKSAIEMHQDDMW----IWGNR 194
>U00050-5|AAM22063.1| 291|Caenorhabditis elegans Hypothetical
protein F09F7.7a protein.
Length = 291
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 229 YAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNK 393
YA++ K +E+D + P +C + E+ S I H+ + W IW N+
Sbjct: 144 YADMLLNKMSEYDVKKLGNYQPFEMCNLEYEEVKKSAIEMHQDDMW----IWGNR 194
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
protein F55H12.3 protein.
Length = 2972
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 187 RNLSYAIFLLSCFTYAELSDTKNNEWDFLIFTQHWPATICRI 312
RN + +I +LS SDT + +F I+ Q A++C I
Sbjct: 371 RNATSSIMILSSSFVLTASDTDTRKTEFQIYYQEADASLCNI 412
>Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical
protein F20D1.6 protein.
Length = 915
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 538 SIRGPINCTMIVLSQYCPKILPSLFQ 461
+IR +NC +I+ Y K LP+ FQ
Sbjct: 334 AIRSDLNCALILGKHYTQKELPNAFQ 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,857,774
Number of Sequences: 27780
Number of extensions: 360036
Number of successful extensions: 937
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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