Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6o13
(463 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 147 2e-35
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 145 6e-35
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 145 6e-35
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 145 6e-35
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 145 6e-35
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 143 2e-34
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 143 3e-34
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 77 3e-14
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 31 1.9
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 30 3.4
BC111719-1|AAI11720.2| 1147|Homo sapiens caspase recruitment dom... 29 7.8
AK074049-1|BAB84875.1| 1171|Homo sapiens FLJ00120 protein protein. 29 7.8
AF352576-1|AAL34460.1| 1147|Homo sapiens CARD-containing MAGUK p... 29 7.8
AF322641-1|AAG53402.1| 1147|Homo sapiens caspase recruitment dom... 29 7.8
AC004906-1|AAQ96893.1| 1147|Homo sapiens unknown protein. 29 7.8
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 147 bits (356), Expect = 2e-35
Identities = 64/135 (47%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 5 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 64
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LEDKRK KA +K+L R+ K A + V
Sbjct: 65 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAEKNV 124
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 125 EKKIDKYTEVLKTHG 139
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 64 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 123
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 124 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 183
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 184 EKKIDKYTEVLKTHG 198
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 5 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 64
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 65 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 124
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 125 EKKIDKYTEVLKTHG 139
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 145 bits (352), Expect = 6e-35
Identities = 63/135 (46%), Positives = 90/135 (66%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 143 bits (347), Expect = 2e-34
Identities = 62/135 (45%), Positives = 89/135 (65%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 143 bits (346), Expect = 3e-34
Identities = 62/135 (45%), Positives = 89/135 (65%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 66 PSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAALK 125
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A + V
Sbjct: 126 VVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNV 185
Query: 361 SKATTPFTTIIQSYG 405
K +T +++++G
Sbjct: 186 EKKIDKYTEVLKTHG 200
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 77.0 bits (181), Expect = 3e-14
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +1
Query: 64 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 243
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 244 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 366
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 61 WKYQAVTATLEEKRKEKAKIHYWKKKQLMRLRKQAEKNVKK 101
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 205 NYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLK 330
NY R S E+ K RDV+ LEDK K ++ V ++K K
Sbjct: 500 NYDFQARNSSELSVKQRDVLEVLEDKEKVSELEAVMEKQKKK 541
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 271 LEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGYN*D*E 423
L+ R+GK KR A +K++ K G+ S A +PF + + SY YN D E
Sbjct: 566 LKSSREGKH-KRAAKTRKMEVGFKARGQPKS-AHSPFASEVSSYSYNTDSE 614
>BC111719-1|AAI11720.2| 1147|Homo sapiens caspase recruitment domain
family, member 11 protein.
Length = 1147
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +1
Query: 247 KYRDVVRKLEDKR---KGKAVKR----VAYEKKLKRITKDAG--EKVSKATTPFTTIIQS 399
KYR +R+LE+K + + V+R V E KL+R++KD+ ++ P T I Q
Sbjct: 395 KYRKQIRELEEKNDEMRIEMVRREACIVNLESKLRRLSKDSNNLDQSLPRNLPVTIISQD 454
Query: 400 YG 405
+G
Sbjct: 455 FG 456
>AK074049-1|BAB84875.1| 1171|Homo sapiens FLJ00120 protein protein.
Length = 1171
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +1
Query: 247 KYRDVVRKLEDKR---KGKAVKR----VAYEKKLKRITKDAG--EKVSKATTPFTTIIQS 399
KYR +R+LE+K + + V+R V E KL+R++KD+ ++ P T I Q
Sbjct: 419 KYRKQIRELEEKNDEMRIEMVRREACIVNLESKLRRLSKDSNNLDQSLPRNLPVTIISQD 478
Query: 400 YG 405
+G
Sbjct: 479 FG 480
>AF352576-1|AAL34460.1| 1147|Homo sapiens CARD-containing MAGUK
protein CARMA1 protein.
Length = 1147
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +1
Query: 247 KYRDVVRKLEDKR---KGKAVKR----VAYEKKLKRITKDAG--EKVSKATTPFTTIIQS 399
KYR +R+LE+K + + V+R V E KL+R++KD+ ++ P T I Q
Sbjct: 395 KYRKQIRELEEKNDEMRIEMVRREACIVNLESKLRRLSKDSNNLDQSLPRNLPVTIISQD 454
Query: 400 YG 405
+G
Sbjct: 455 FG 456
>AF322641-1|AAG53402.1| 1147|Homo sapiens caspase recruitment domain
protein 11 protein.
Length = 1147
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +1
Query: 247 KYRDVVRKLEDKR---KGKAVKR----VAYEKKLKRITKDAG--EKVSKATTPFTTIIQS 399
KYR +R+LE+K + + V+R V E KL+R++KD+ ++ P T I Q
Sbjct: 395 KYRKQIRELEEKNDEMRIEMVRREACIVNLESKLRRLSKDSNNLDQSLPRNLPVTIISQD 454
Query: 400 YG 405
+G
Sbjct: 455 FG 456
>AC004906-1|AAQ96893.1| 1147|Homo sapiens unknown protein.
Length = 1147
Score = 29.1 bits (62), Expect = 7.8
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Frame = +1
Query: 247 KYRDVVRKLEDKR---KGKAVKR----VAYEKKLKRITKDAG--EKVSKATTPFTTIIQS 399
KYR +R+LE+K + + V+R V E KL+R++KD+ ++ P T I Q
Sbjct: 395 KYRKQIRELEEKNDEMRIEMVRREACIVNLESKLRRLSKDSNNLDQSLPRNLPVTIISQD 454
Query: 400 YG 405
+G
Sbjct: 455 FG 456
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,320,633
Number of Sequences: 237096
Number of extensions: 1527992
Number of successful extensions: 10460
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10445
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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