Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6o13
(463 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p pro... 162 2e-40
AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB ... 162 2e-40
AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell fa... 28 5.3
BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p pro... 28 7.0
AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p pro... 28 7.0
AF017777-1|AAC28400.1| 836|Drosophila melanogaster tweety protein. 28 7.0
AE014298-3117|AAN09675.3| 836|Drosophila melanogaster CG1693-PB... 28 7.0
AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA... 28 7.0
AE014296-2379|AAF49745.1| 102|Drosophila melanogaster CG13482-P... 28 7.0
>AY051640-1|AAK93064.1| 205|Drosophila melanogaster GM13948p
protein.
Length = 205
Score = 162 bits (393), Expect = 2e-40
Identities = 72/136 (52%), Positives = 92/136 (67%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
PARGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR +DG P P+D
Sbjct: 68 PARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMR 127
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
L+ R YC VGRLSHE+GW Y+DV++ LE KRK K + + ++LK++T A E +
Sbjct: 128 VLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENI 187
Query: 361 SKATTPFTTIIQSYGY 408
+KA PF II+SYGY
Sbjct: 188 AKAAEPFNKIIKSYGY 203
>AE014297-307|AAF51987.1| 205|Drosophila melanogaster CG1475-PB
protein.
Length = 205
Score = 162 bits (393), Expect = 2e-40
Identities = 72/136 (52%), Positives = 92/136 (67%)
Frame = +1
Query: 1 PARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXX 180
PARGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR +DG P P+D
Sbjct: 68 PARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMR 127
Query: 181 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKV 360
L+ R YC VGRLSHE+GW Y+DV++ LE KRK K + + ++LK++T A E +
Sbjct: 128 VLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENI 187
Query: 361 SKATTPFTTIIQSYGY 408
+KA PF II+SYGY
Sbjct: 188 AKAAEPFNKIIKSYGY 203
>AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell factor
HCF protein.
Length = 1500
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = +2
Query: 206 ITVM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKR----NLRGSPRMLVRRCRRRQ 373
+TVM + M GN VM+ + L K+ N GSPR + +
Sbjct: 919 VTVMSTNTSMAASGNKVMVLPGTSSNNSPATTTALSAKKSFVFNAGGSPRTVTLATKSIN 978
Query: 374 HHSLPSSNPM 403
S+P S P+
Sbjct: 979 AKSIPQSQPV 988
>BT024389-1|ABC86451.1| 122|Drosophila melanogaster IP05464p
protein.
Length = 122
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/50 (24%), Positives = 17/50 (34%)
Frame = -1
Query: 268 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTRH 119
+ HHG + HG H +YG H + H + G H
Sbjct: 66 HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 115
>AF184227-1|AAD55738.1| 970|Drosophila melanogaster LD23194p
protein.
Length = 970
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Frame = -1
Query: 367 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYE-----QHHGISIQFHGTVCLHDSNY 203
P P+HQHP S H+Q P PS Q Q H +Q H +
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQQQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ 738
Query: 202 GQVSDRRHVEQQALQH 155
Q ++H +QQ H
Sbjct: 739 QQHHQQQHQQQQQQHH 754
>AF017777-1|AAC28400.1| 836|Drosophila melanogaster tweety protein.
Length = 836
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Frame = -1
Query: 367 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYE-----QHHGISIQFHGTVCLHDSNY 203
P P+HQHP S H+Q P PS Q Q H +Q H +
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQQQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ 738
Query: 202 GQVSDRRHVEQQALQH 155
Q ++H +QQ H
Sbjct: 739 QQHHQQQHQQQQQQHH 754
>AE014298-3117|AAN09675.3| 836|Drosophila melanogaster CG1693-PB,
isoform B protein.
Length = 836
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Frame = -1
Query: 367 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYE-----QHHGISIQFHGTVCLHDSNY 203
P P+HQHP S H+Q P PS Q Q H +Q H +
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQQQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ 738
Query: 202 GQVSDRRHVEQQALQH 155
Q ++H +QQ H
Sbjct: 739 QQHHQQQHQQQQQQHH 754
>AE014298-3116|AAF50831.4| 970|Drosophila melanogaster CG1693-PA,
isoform A protein.
Length = 970
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Frame = -1
Query: 367 PSTPSHQHPW*SS*VSFHRQLS*QPCPSSCLQAYE-----QHHGISIQFHGTVCLHDSNY 203
P P+HQHP S H+Q P PS Q Q H +Q H +
Sbjct: 684 PQIPAHQHP-----PSLHQQQQQPPPPSQQQQQLHQLKSPQQHQQQLQQHQQQQQQQHHQ 738
Query: 202 GQVSDRRHVEQQALQH 155
Q ++H +QQ H
Sbjct: 739 QQHHQQQHQQQQQQHH 754
>AE014296-2379|AAF49745.1| 102|Drosophila melanogaster CG13482-PA
protein.
Length = 102
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/50 (24%), Positives = 17/50 (34%)
Frame = -1
Query: 268 YEQHHGISIQFHGTVCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTRH 119
+ HHG + HG H +YG H + H + G H
Sbjct: 46 HHHHHGPPMHHHGPPPHHHHHYGPPPPPPHYDHHHHHHGSHFDHHHGPHH 95
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,058,269
Number of Sequences: 53049
Number of extensions: 465947
Number of successful extensions: 1349
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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