Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6o09
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical pr...    49   3e-06
Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical p...    49   3e-06
U97593-2|AAY86241.1|  195|Caenorhabditis elegans Hypothetical pr...    30   1.8  

>Z22175-2|CAA80131.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 25/97 (25%), Positives = 47/97 (48%)
 Frame = +1

Query: 388 SNMKTEDERTISDVEKSSEKVNELSFEEAFELTGHGRFNHLVLFTSGLIMLNVSMESVGM 567
           SN+    E      ++S +     + +EA E  G GRF   +   +G+  +  +ME + +
Sbjct: 44  SNLDDRTELGEPTDQRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLL 103

Query: 568 SYAITSAECELGLNSMHKGLINAAAFIGIIATSFLWG 678
           S    +  CE G++S+ + L+    F G++ +S  WG
Sbjct: 104 SLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWG 140


>Z11115-20|CAA77460.2|  520|Caenorhabditis elegans Hypothetical
           protein ZK637.1 protein.
          Length = 520

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 25/97 (25%), Positives = 47/97 (48%)
 Frame = +1

Query: 388 SNMKTEDERTISDVEKSSEKVNELSFEEAFELTGHGRFNHLVLFTSGLIMLNVSMESVGM 567
           SN+    E      ++S +     + +EA E  G GRF   +   +G+  +  +ME + +
Sbjct: 44  SNLDDRTELGEPTDQRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLL 103

Query: 568 SYAITSAECELGLNSMHKGLINAAAFIGIIATSFLWG 678
           S    +  CE G++S+ + L+    F G++ +S  WG
Sbjct: 104 SLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWG 140


>U97593-2|AAY86241.1|  195|Caenorhabditis elegans Hypothetical
           protein C46G7.5 protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 469 PRTTVRLPSPSFFLHPKLFFRLRFSYSKKYVL 374
           P +  + P PS F++  + F L+  YSKK +L
Sbjct: 23  PSSNFKSPPPSLFINVPILFTLQTYYSKKIIL 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,123,146
Number of Sequences: 27780
Number of extensions: 275301
Number of successful extensions: 695
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)