Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6o01
         (415 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   228   2e-60
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   228   3e-60
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   228   3e-60
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   228   3e-60
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   133   1e-31
AE013599-3474|AAM71125.1|  790|Drosophila melanogaster CG3622-PA...    27   9.8  
AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB...    27   9.8  
AE013599-1483|AAF58514.3|  467|Drosophila melanogaster CG13157-P...    27   9.8  

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  228 bits (558), Expect = 2e-60
 Identities = 109/140 (77%), Positives = 114/140 (81%), Gaps = 3/140 (2%)
 Frame = +3

Query: 3   FSRL--WCHFVK-ITXGXXXXXXXXXXKNKPYPKSRFCRGVPDPKIRIFDLGKXRATVDX 173
           FSR+  W   V  +  G          KNKPYPKSRFCRGVPDPKIRIFDLG+ +ATV+ 
Sbjct: 5   FSRVLRWKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVED 64

Query: 174 FPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFXIRMRLHPFHVIRIXKMLSC 353
           FPLCVHLVSDEYEQLSSEALEAGRICCNKYLVK CGKDQF IRMRLHPFHVIRI KMLSC
Sbjct: 65  FPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSC 124

Query: 354 XGADRLXTGMRGAFGKPQGT 413
            GADRL TGMRGAFGKPQGT
Sbjct: 125 AGADRLQTGMRGAFGKPQGT 144


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  228 bits (557), Expect = 3e-60
 Identities = 103/113 (91%), Positives = 106/113 (93%)
 Frame = +3

Query: 75  KNKPYPKSRFCRGVPDPKIRIFDLGKXRATVDXFPLCVHLVSDEYEQLSSEALEAGRICC 254
           KNKPYPKSRFCRGVPDPKIRIFDLG+ +ATV+ FPLCVHLVSDEYEQLSSEALEAGRICC
Sbjct: 13  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICC 72

Query: 255 NKYLVKNCGKDQFXIRMRLHPFHVIRIXKMLSCXGADRLXTGMRGAFGKPQGT 413
           NKYLVK CGKDQF IRMRLHPFHVIRI KMLSC GADRL TGMRGAFGKPQGT
Sbjct: 73  NKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGT 125


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  228 bits (557), Expect = 3e-60
 Identities = 103/113 (91%), Positives = 106/113 (93%)
 Frame = +3

Query: 75  KNKPYPKSRFCRGVPDPKIRIFDLGKXRATVDXFPLCVHLVSDEYEQLSSEALEAGRICC 254
           KNKPYPKSRFCRGVPDPKIRIFDLG+ +ATV+ FPLCVHLVSDEYEQLSSEALEAGRICC
Sbjct: 13  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICC 72

Query: 255 NKYLVKNCGKDQFXIRMRLHPFHVIRIXKMLSCXGADRLXTGMRGAFGKPQGT 413
           NKYLVK CGKDQF IRMRLHPFHVIRI KMLSC GADRL TGMRGAFGKPQGT
Sbjct: 73  NKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGT 125


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  228 bits (557), Expect = 3e-60
 Identities = 103/113 (91%), Positives = 106/113 (93%)
 Frame = +3

Query: 75  KNKPYPKSRFCRGVPDPKIRIFDLGKXRATVDXFPLCVHLVSDEYEQLSSEALEAGRICC 254
           KNKPYPKSRFCRGVPDPKIRIFDLG+ +ATV+ FPLCVHLVSDEYEQLSSEALEAGRICC
Sbjct: 26  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICC 85

Query: 255 NKYLVKNCGKDQFXIRMRLHPFHVIRIXKMLSCXGADRLXTGMRGAFGKPQGT 413
           NKYLVK CGKDQF IRMRLHPFHVIRI KMLSC GADRL TGMRGAFGKPQGT
Sbjct: 86  NKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGT 138


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  133 bits (321), Expect = 1e-31
 Identities = 61/78 (78%), Positives = 67/78 (85%)
 Frame = +3

Query: 75  KNKPYPKSRFCRGVPDPKIRIFDLGKXRATVDXFPLCVHLVSDEYEQLSSEALEAGRICC 254
           KNKPYPKSRFCRGVPDPKIRIFDLG+ +ATV+ FPLCVHLVSDEYEQLSSEALEAGRICC
Sbjct: 19  KNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEAGRICC 78

Query: 255 NKYLVKNCGKDQFXIRMR 308
           NK ++   G D+    MR
Sbjct: 79  NK-MLSCAGADRLQTGMR 95



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = +3

Query: 339 KMLSCXGADRLXTGMRGAFGKPQGT 413
           KMLSC GADRL TGMRGAFGKPQGT
Sbjct: 80  KMLSCAGADRLQTGMRGAFGKPQGT 104


>AE013599-3474|AAM71125.1|  790|Drosophila melanogaster CG3622-PA,
           isoform A protein.
          Length = 790

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
 Frame = -2

Query: 405 EACQTHHASQXGA-YQLQXMITFYXCG*RGKGEVSCGXGTDPFRSSLRGTYCSRYVLPPK 229
           E C+  H  Q G  +     +    CG      + C  GT   RSS +G+Y +    PP+
Sbjct: 243 EICRDLHCRQDGLPWTSHPALEGTECG----PNMWCRGGTCEARSSKQGSYSALKSWPPE 298

Query: 228 PLSSAVH---IRRTPS 190
            +  A H   IR  P+
Sbjct: 299 HIPEATHEKIIRHEPN 314


>AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB,
           isoform B protein.
          Length = 1091

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
 Frame = -2

Query: 405 EACQTHHASQXGA-YQLQXMITFYXCG*RGKGEVSCGXGTDPFRSSLRGTYCSRYVLPPK 229
           E C+  H  Q G  +     +    CG      + C  GT   RSS +G+Y +    PP+
Sbjct: 544 EICRDLHCRQDGLPWTSHPALEGTECG----PNMWCRGGTCEARSSKQGSYSALKSWPPE 599

Query: 228 PLSSAVH---IRRTPS 190
            +  A H   IR  P+
Sbjct: 600 HIPEATHEKIIRHEPN 615


>AE013599-1483|AAF58514.3|  467|Drosophila melanogaster CG13157-PA
           protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -2

Query: 228 PLSSAVHIRRTPSARTXESXQRSLXSYPNRRYGSWDQVHPDRTSISDT 85
           P+SS VH    P  R   +   +  S     YG+W   HP+R    DT
Sbjct: 67  PISSTVHTH-IPLWREETAPLPATPSQEAVVYGNWKPEHPERPEKVDT 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,821,784
Number of Sequences: 53049
Number of extensions: 365523
Number of successful extensions: 876
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)