Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6n13
(658 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 73 5e-14
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 34 0.016
SPCC1753.03c |rec7||meiotic recombination protein Rec7 |Schizosa... 33 0.036
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 31 0.11
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 31 0.15
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 30 0.26
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.26
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.26
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.34
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.45
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 0.45
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 29 0.78
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 1.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.0
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 28 1.4
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 28 1.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 28 1.4
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 1.8
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 2.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.4
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 27 2.4
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 27 2.4
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 27 3.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.1
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 26 4.2
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 26 4.2
SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomy... 26 4.2
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 4.2
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 26 4.2
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 5.5
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 26 5.5
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 25 7.3
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.3
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 25 9.6
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 25 9.6
SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces pom... 25 9.6
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 9.6
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 25 9.6
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 9.6
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 72.5 bits (170), Expect = 5e-14
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Frame = +3
Query: 237 PAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQ 416
P P P T + G P G G+ A R P+ +Q RP + P +
Sbjct: 509 PMPMYPGMPTQFPAGGPAP--GYPGMNA-----RGPVPAQG-RPMMMPGSVPSAGPAEAE 560
Query: 417 PAVHIQGQ-EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 593
+ G E T+ LAA P + +KQ+LGE L+P + L+GKITGMLLE+ NSEL
Sbjct: 561 AVPAVPGMPERFTAADLAAVPEESRKQVLGELLYPKVFVREEKLSGKITGMLLEMPNSEL 620
Query: 594 LHMLEHAESLKAKVDEAVAVL 656
L +LE +L +V+EA+ VL
Sbjct: 621 LELLEDDSALNERVNEAIGVL 641
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = +3
Query: 153 TPRWNAQPPVRPSTQAASAYANMQPTYRPAPRA---PAQSTIRTSLGA--RPITGQQGVA 317
TP + PP+ PS ++ + PAP P+ T+ + + RPI
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Query: 318 AAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQP 419
A ++ +PPL SSR + N + PP P P
Sbjct: 283 AINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 33.5 bits (73), Expect = 0.027
Identities = 32/135 (23%), Positives = 46/135 (34%), Gaps = 1/135 (0%)
Frame = +3
Query: 90 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPA-PRAPAQST 266
PSLPP+ P + P P P+ P A A P PA P APA +
Sbjct: 429 PSLPPS----APPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Query: 267 IRTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEP 446
+ Q G A ASIR + +P++ + P V
Sbjct: 485 AAPVASIAELPQQDGRANLMASIRASGGMDLLKSRKVSASPSVASTKTSNPPVEAPPSNN 544
Query: 447 LTSTMLAAAPLQEQK 491
L + +A ++ K
Sbjct: 545 LMDALASALNQRKTK 559
Score = 26.6 bits (56), Expect = 3.1
Identities = 27/112 (24%), Positives = 38/112 (33%)
Frame = +3
Query: 90 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTI 269
P LPP A + + P PP R + + P P P +S
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPP--PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 270 RTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAV 425
S+ P QG +A S +P + + NPPAP PA+
Sbjct: 348 AGSIPLPP----QGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAI 395
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 330 SIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQE 443
SI P++S +R + ++ PN N P A + G+E
Sbjct: 132 SIENPVLSFITRKGSSRHAPNNSNIQPPSAAPPVPGKE 169
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 34.3 bits (75), Expect = 0.016
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +3
Query: 126 AQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQ 305
AQ TQ RP P A+P +TQAA+ + T + A +T+ S A P T
Sbjct: 1019 AQQTQNRPPAPAMQARPN---TTQAAAPVTSTTTTIKQA------TTVSASKPA-PST-- 1066
Query: 306 QGVAAAAASIRPPLVSQSSRP-ANYKYTPNMRNPPAPQPAVHIQGQE 443
V +AA+S P +S+ S P AN P+ PP P P ++ ++
Sbjct: 1067 --VTSAASS--PSNISKPSAPVANNVSKPSAVPPPPPPPPAEVEKKD 1109
>SPCC1753.03c |rec7||meiotic recombination protein Rec7
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 339
Score = 33.1 bits (72), Expect = 0.036
Identities = 36/143 (25%), Positives = 61/143 (42%)
Frame = +3
Query: 99 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTS 278
PP R+ G A MTQ+ P+R T S A+ QPT+ ++ + TS
Sbjct: 203 PPLKRFRGDAGMTQM-----------PLRSDTSIESITASQQPTWD-------ENVVITS 244
Query: 279 LGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTST 458
P + + A+ + P+++ + P N + + P Q ++ P TS
Sbjct: 245 ---SPFNPNRNAYSYGANSQYPIIAAT--PLNSQTQASWVAQPENQAYANLIPSPPTTSQ 299
Query: 459 MLAAAPLQEQKQMLGERLFPLIQ 527
+L +E+KQ+ + LF L Q
Sbjct: 300 ILPTELTEEEKQLRSKVLFYLKQ 322
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 31.5 bits (68), Expect = 0.11
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Frame = +3
Query: 156 PRWNAQPPVRPS-TQAASAYA---NMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAA 323
P + QPP P+ +AAS A N++P+ + PA S + QQ ++
Sbjct: 36 PPSSQQPPSTPNGKEAASPSALKQNVRPSLNSVQQTPASIDAVASSSNVSLQSQQPLSKP 95
Query: 324 AASIRPPLVSQSSRPAN--YKYTPNMRNPPA---PQPAVH 428
S +P + P+N ++ + N PA P PA H
Sbjct: 96 VVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVSPNPAAH 135
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 31.1 bits (67), Expect = 0.15
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Frame = +3
Query: 177 PVRPSTQAASAYANMQPTYR--PAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLV 350
P PS ++ + P+Y AP PA S + P Q AA PP
Sbjct: 48 PPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQPYPP-- 105
Query: 351 SQSSRPANYKYTPNMRNPPAPQPA 422
Q P Y PN N QPA
Sbjct: 106 -QGGYPQQPYYYPNQPNYYPAQPA 128
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 651 QQQLHLL*LSETLHVLTYEEVLNYQFPKAYQLFSQPNQGAFSE 523
QQQ H++ + E +H + E + K L Q +GAF E
Sbjct: 249 QQQAHIVRMEELIHAVEKERKTETDYMKKESLSEQKERGAFME 291
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.3 bits (65), Expect = 0.26
Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = +2
Query: 89 TIAPSSTTLLWTSSNDSNKTYNSKVECTAPCKA*HTSSICICKYATHLQTSTESSGPIYN 268
T++ SS + +SS+ S+ + +S T+P + +SS ++ +S+ SS +
Sbjct: 126 TVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 185
Query: 269 KNIVRCKTHNWTARSCCCCC----IYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPR 436
+ + + ++ S I SST S S S + ++P+S SS++
Sbjct: 186 SSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSS---SSSFIT 242
Query: 437 TRTSDLYYACSSTTPGTETDAWGTTV 514
T +S + + + TP + + + + V
Sbjct: 243 TMSSSTFISTVTVTPSSSSSSTSSEV 268
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/69 (26%), Positives = 37/69 (53%)
Frame = +2
Query: 329 IYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGT 508
+ S+T S S SPS T P+SS++SS+ + +S + SS++ + + + +
Sbjct: 132 VSSTTSSSSSSSPSSS-STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 190
Query: 509 TVSTYSENA 535
+ S+ S ++
Sbjct: 191 SSSSSSSSS 199
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.26
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 14/144 (9%)
Frame = +3
Query: 90 PSLPPA-PRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQST 266
PS P + P PA P P+ +++ P P A + + T P P +
Sbjct: 992 PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
Query: 267 I-RTSLGAR------PITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAV 425
+ ++S GA P + + A S PP+ + S P K P++ PP P+P+V
Sbjct: 1052 VPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK--PSVAAPPVPKPSV 1109
Query: 426 HI------QGQEPLTSTMLAAAPL 479
+ G P+ +AA P+
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPV 1133
Score = 26.2 bits (55), Expect = 4.2
Identities = 25/111 (22%), Positives = 37/111 (33%)
Frame = +3
Query: 90 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTI 269
P+ PP+ P PT+ PP P ++ S P P R P +
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVST----SPA-APLARVPPVPKL 1017
Query: 270 RTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPA 422
+ P+ S PP+ +S P K + + P P PA
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.34
Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +3
Query: 87 VPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANM---QPTYRPAP-RAP 254
+P++P Y P T T + PP ST A A M P R AP AP
Sbjct: 823 LPTVPRTTSYTSPYATTSSHITPADVHPLPPPSTSTTAGWNDAPMLGQLPMRRAAPSMAP 882
Query: 255 AQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQ 434
+S + A+P + + + PP S ++ P + +PP P+ +
Sbjct: 883 VRSPFPGASSAQPAAMSRTSSVSTLPPPPPTASMTAS------APAIASPPPPKVG---E 933
Query: 435 GQEPLTSTMLAAAPLQE 485
P T++ P+Q+
Sbjct: 934 TYHPPTASGTRVPPVQQ 950
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.45
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Frame = +2
Query: 89 TIAPSSTTLLWTSSNDSNKTYNSKVECTAP---CKA*HTSSICICKYATH--LQTSTESS 253
T + SS++L +S+ S+ T +S + ++ A TSS AT L +S+ +S
Sbjct: 67 TSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTS 126
Query: 254 GPIYNKNIVRCKTHNWTARSCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYP 433
+ + +I + + S +++ S++ S + T A PTSS TSS+
Sbjct: 127 SSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNS----TTSATPTSSATSSSLS 182
Query: 434 RTRTSDLYYACS--STTPGTETDAWGTTVSTYSENA 535
T S+ + S S++ + T A T+ S S A
Sbjct: 183 STAASNSATSSSLASSSLNSTTSATATSSSLSSTAA 218
Score = 26.2 bits (55), Expect = 4.2
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 2/148 (1%)
Frame = +2
Query: 89 TIAPSSTTLLWTSSNDSNKTYNSKVECTAPCKA*HTSSICICKYATHLQTSTESSGPIYN 268
T A +S T +S+ N T ++ ++ ++S A+ ST S+ +
Sbjct: 184 TAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSS 243
Query: 269 K--NIVRCKTHNWTARSCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTR 442
+ V T ++ S S+T S ++ + S L + P+S+ SSA T
Sbjct: 244 SISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSL---LPSSTPSSTPLSSANSTTA 300
Query: 443 TSDLYYACSSTTPGTETDAWGTTVSTYS 526
TS +S T T A T +S+ S
Sbjct: 301 TSASSTPLTSVNSTTTTSASSTPLSSVS 328
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 335 SSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTV 514
SS ++ K++ + T A +S T+SSA + TS A SST T +++
Sbjct: 50 SSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSL 109
Query: 515 STYS 526
++ S
Sbjct: 110 TSSS 113
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 29.5 bits (63), Expect = 0.45
Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 9/128 (7%)
Frame = +3
Query: 90 PSLPPAPRYYGPAQMTQIRPTTPRWN-AQPPVRPSTQAASAYANMQPTYRPAPRAPAQST 266
P +P P ++ P + P P ++PPV P+ + N P P P S
Sbjct: 156 PPVPQVPSHWYPVSLPS--PNLPHQPISKPPVIPNLPKLQVHPNRLP--HPIHNHPYSSP 211
Query: 267 IRTSLGARPIT---GQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRN-----PPAPQPA 422
P T A A +I P S + NY TP+ N P +P A
Sbjct: 212 TSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLA 271
Query: 423 VHIQGQEP 446
V + +P
Sbjct: 272 VWLPMTQP 279
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 28.7 bits (61), Expect = 0.78
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 123 PAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQP---TYRPAPRAPAQSTIRTSLGARP 293
PA + P ++ P P + AASAY++ P R P APA ++ SL ++P
Sbjct: 218 PASPKSVSPDLVYVSSDNP--PVSTAASAYSSSLPISDVTRALPLAPASNSQHPSLSSQP 275
Query: 294 IT 299
++
Sbjct: 276 VS 277
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 386 TKHAQPTSSTTSSA--YPRTRTSDLYYACSSTTPGTETDAWGTTVSTYS 526
+ H QPTS+T+SS+ YP +R + A SS++P + TT S S
Sbjct: 236 SSHLQPTSATSSSSRLYP-SRPAPTPPASSSSSPLLSSQTVKTTTSNAS 283
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.0
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Frame = +2
Query: 101 SSTTLLWTSSNDSNKTYNSKVECTAPCKA*HTSSICICKYATHLQTSTESSGPIYNKNIV 280
SST+ +SS+ S+ +S + + +SS +T +S+ SS P + +
Sbjct: 248 SSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTI 307
Query: 281 RCKTHNWTARSCCCCCIY---SSTFSISKQSPSQL*IYTKHAQPTSS----TTSSAYPRT 439
+ + ++ S SS+FS S S S I + + P+SS TTSS+ +
Sbjct: 308 SSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSST-ISSSSSSPSSSSFSSTTSSSKSSS 366
Query: 440 RTSDLYYACSSTTPGTETDA 499
S + SST+ T T +
Sbjct: 367 SFSSTVSSSSSTSSSTLTSS 386
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 462 LAAAPLQEQKQMLGERLF-PLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 638
L +A +Q+ +M G+ F P ++R H D GK + + LLH L + K++
Sbjct: 290 LESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSFKIE 349
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 10 TCREWLVCACSKWAKYSSLVVQVDFLYHRSLQH 108
T + +C C + ++ ++VQV LY ++L H
Sbjct: 288 TYENYYLCECDAFFLFTQMMVQVRDLYEKTLDH 320
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 1.4
Identities = 23/104 (22%), Positives = 40/104 (38%)
Frame = +3
Query: 60 QPSGASGFFVPSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 239
+PS ++ +P P G + + P+ Q + AA+ Y Q + P
Sbjct: 312 EPSSSTATDIPPPYSTPSVAGASDYST--PSAGYQTVQTTTTTTEAAAAQYP--QAAFPP 367
Query: 240 APRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQSSRPA 371
P P + + P+ AAAA + PP + ++ PA
Sbjct: 368 PPVMPQPAAAAVTT---PVAAPVAAAAAAVPVPPPAPAPAAAPA 408
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 1.8
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Frame = +3
Query: 153 TPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAAS 332
TP+ AQP +P A + +P +P P+ S + R Q
Sbjct: 427 TPKPEAQPVSKPKESAEEQKPSKEPEVKPT--TPSASKVEEPSKKRDEDNHQKEETVTQP 484
Query: 333 IR--PPLVSQSSRPAN--YKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQM 497
R P+ +PA+ ++ +++ P+ + + + + P AAPL E K++
Sbjct: 485 KREKTPVEKSFPKPASSPVTFSEDVKKEPSEEKKLEVSDEAP------KAAPLAESKKV 537
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.1 bits (57), Expect = 2.4
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Frame = +3
Query: 93 SLPPAPRYYGPAQMTQIRPTTPRWN----AQPPVRPSTQAASA--YANMQPTYRPAPRAP 254
S P P+ + RP T N AQP V + Y QP+Y P P
Sbjct: 226 STAPNPQEINYQWSHEYRPHTQYQNNLLRAQPNVNCENFPTTVPNYPFQQPSYNPNALVP 285
Query: 255 AQSTIRTSLGARP-ITGQQGVAAAAASI 335
+ +T+ + L P +T G + A+SI
Sbjct: 286 SYTTLVSQLPPSPCLTVSSGPLSTASSI 313
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 147 PTTPRWNAQPPVRPSTQAASAYANMQPTY--RPAPRAPAQS 263
P TP +PP ST++ ++M +Y P+P +P+ +
Sbjct: 276 PATPSQPPRPPTNASTRSTGTSSSMAHSYDSPPSPSSPSDA 316
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 2.4
Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Frame = +3
Query: 174 PPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAAS-IRPPLV 350
PPV P+ + +A + PAP ++ + T A A+AS + L
Sbjct: 351 PPVNPTIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLK 410
Query: 351 SQSSRPANYKYTPNMRNPPAPQP-AVHIQGQEPL 449
++ N + + NP P A + + + P+
Sbjct: 411 PSTANDTNGSSSSSSSNPRTSSPLASNAENKPPV 444
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 171 QPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPI 296
QP + P Q + T++P PR P Q + T RP+
Sbjct: 700 QPTLHPQGQLPIQNVEQRATHKPLPRPPVQ--VETREPVRPV 739
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 297 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPP 407
T Q +A++A S P +Q SRPA P+ PP
Sbjct: 548 TTQSVLASSAPSAGRPAAAQISRPAQLFRIPSTNPPP 584
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 3.1
Identities = 32/142 (22%), Positives = 59/142 (41%)
Frame = +2
Query: 101 SSTTLLWTSSNDSNKTYNSKVECTAPCKA*HTSSICICKYATHLQTSTESSGPIYNKNIV 280
SST++ TS+N ++ T+ S + + TSS TS S + N+
Sbjct: 635 SSTSIPLTSTNRTSTTFTSSTSISTSSSSTATSS-----------TSFASESSSFYSNVT 683
Query: 281 RCKTHNWTARSCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYY 460
T + T + + STF+ S + S L ++ + ++S+ +T+
Sbjct: 684 ---TSSSTVSTPPPTTSFPSTFTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSS 740
Query: 461 ACSSTTPGTETDAWGTTVSTYS 526
SS++ T + TT S+ S
Sbjct: 741 GSSSSSSYTPASSTSTTTSSVS 762
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 522 IQRMHPDLAGKITGMLLEID-NSELLHMLEHAESLKAKVDEAV 647
+QR++P ++ G LL+ID + EL+ L + + VDE V
Sbjct: 801 VQRINPSKTPQVVGALLDIDCDEELVQNLLMSVVGQVPVDELV 843
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 342 PLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGER 509
PL S++ ++ PN R+ +V + +EP + + A PL + + L +R
Sbjct: 12 PLESENESSLTSRFLPNKRDGGKDNESVIPEKEEPDLNEPVLAVPLPKSRYALTKR 67
>SPBC32F12.08c |duo1||DASH complex subunit Duo1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 166
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 174 PPVRPSTQAASAYANMQPTYRP 239
P VRP+ +AAS+Y +P++ P
Sbjct: 134 PKVRPARRAASSYVPSRPSHVP 155
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 234 RPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIR----PPLVSQSSRPANY 377
R A AP ++ + TS + P T G A+ + PL SQSSR +NY
Sbjct: 17 RTAYAAPQRAAVDTSNVSPPSTQTGGYASKDTTSTYEGAQPLSSQSSRSSNY 68
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 369 ANYKYTPNMRNPPAPQPAVHIQGQEPL 449
AN + T NMR+P +HIQ +EP+
Sbjct: 815 ANCEKTNNMRDPLTSTIFLHIQPKEPI 841
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.8 bits (54), Expect = 5.5
Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 2/90 (2%)
Frame = +3
Query: 90 PSLPPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAY--ANMQPTYRPAPRAPAQS 263
P PP + Y PA + P + A PP + AY A QP P S
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQPIVVAQPTEHKHS 265
Query: 264 TIRTSLGARPITGQQGVAAAAASIRPPLVS 353
+ +G+ G V A A+ LV+
Sbjct: 266 STFKKIGSG--LGSAFVFGAGATAGADLVN 293
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 380 IYTKHAQPTSSTTSSAYPRTRTSD 451
+YT H PT+ SSA P +T D
Sbjct: 1266 LYTIHQVPTTQRESSALPSDKTFD 1289
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 380 IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTP 481
++ + S TSS+ P++RTS+L S TP
Sbjct: 78 VFNSTSTTLPSATSSSVPQSRTSELSSTNSIPTP 111
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 7.3
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 11/131 (8%)
Frame = +3
Query: 72 ASGFFVPSL--PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANM-------Q 224
++GF P+ P+P+ Y + PT P + S +N
Sbjct: 260 SAGFRPPTFFSSPSPQPYSGPILASTAPTLDGSYLSNPSNSNPAVMSLSSNFPSPPKPNN 319
Query: 225 PTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVSQ--SSRPANYKYTPNMR 398
P Y P PR R S IT S P ++ +S P+ P +
Sbjct: 320 PVYLP-PRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTTSVPSGMSRHPMLM 378
Query: 399 NPPAPQPAVHI 431
NP P+P++ +
Sbjct: 379 NPSTPEPSLGV 389
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.0 bits (52), Expect = 9.6
Identities = 18/81 (22%), Positives = 33/81 (40%)
Frame = +3
Query: 174 PPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAAASIRPPLVS 353
PP +T ASA + P ++ + T + ++ V+ +A+S
Sbjct: 125 PPTNSTTSQASAKHSAVPHRSSQFQSTTLTPSTTDSSSTDVSSSDSVSTSASSSNASNTV 184
Query: 354 QSSRPANYKYTPNMRNPPAPQ 416
+ PA+ TP + N P+ Q
Sbjct: 185 SVTSPASSSATP-LPNQPSQQ 204
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 72 ASGFFVPSLPPAPRYYGPAQMTQIRPTTP 158
A+GF +P L P +GP + QI P
Sbjct: 2 ATGFKLPELAPVKSAWGPPETEQIGGDIP 30
>SPBC25B2.03 |||zf-C3HC4 type zinc finger|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 554
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 366 PANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGE 506
P+N+ YT P + V I+ EP T+ A P + ++ E
Sbjct: 159 PSNFNYTRCCAQPICSECFVEIRRAEPHLPTVHANEPTPNEFDLISE 205
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 25.0 bits (52), Expect = 9.6
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Frame = +3
Query: 135 TQIRPTT--PRWNAQPPVRPSTQAASAYANMQPTYRPAP-RAPAQSTIRTSLGARPITGQ 305
T P T P + A+P R ++ + M YRP P P TS P
Sbjct: 71 TNFYPLTAPPPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPPPAYP 130
Query: 306 QGVAAAAASIR 338
+ A + A+ R
Sbjct: 131 EAAATSDAAFR 141
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.0 bits (52), Expect = 9.6
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 126 AQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQST--IRTSLGARPIT 299
A +RP + A+ P R + + + RP +S I+++L +R T
Sbjct: 320 ASSLAVRPVSRNAQARTPSRLEQREVNVKNSSAKIVRPGTSLGVRSPSRIQSTLSSRTTT 379
Query: 300 GQQGVAAAAASIRPPLVSQSSRP 368
G V AA+I P S + RP
Sbjct: 380 GN--VRTKAANIVRPSSSINRRP 400
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 9.6
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 353 SKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTPGTETDAW--GTTVSTYS 526
S QSP+ + A + ST +S + +S YA S T+P + T + G+ + S
Sbjct: 95 SSQSPTSPHPSNQPAMLSPSTAASQHHHHHSSSSSYAVSPTSPTSPTSSGPIGSNFDSAS 154
Query: 527 E-NAP 538
E N P
Sbjct: 155 EHNGP 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,891,719
Number of Sequences: 5004
Number of extensions: 64910
Number of successful extensions: 319
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -