Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6n10
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087232-7|AAK09082.1| 298|Caenorhabditis elegans Hypothetical ... 70 1e-12
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 33 0.19
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.19
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 33 0.19
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 32 0.26
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z19154-5|CAA79557.1| 162|Caenorhabditis elegans Hypothetical pr... 29 2.4
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 29 2.4
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 29 2.4
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 29 2.4
AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical ... 29 3.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 4.2
AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic ... 28 4.2
AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic ... 28 4.2
AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic ... 28 4.2
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 28 4.2
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 27 7.3
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 27 7.3
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 27 7.3
>AC087232-7|AAK09082.1| 298|Caenorhabditis elegans Hypothetical
protein Y92H12BR.8 protein.
Length = 298
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/145 (28%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Frame = +2
Query: 152 LSMGSRQITEKSLSMLRSLPRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQ 331
+S +R E++L ++ RI + + RDN G++ T ++ + H H +G+ +R
Sbjct: 1 MSQAARSAKERALQIVEQASRIRIQDARDNIGARTTGRQLKKGHNQMGH---TQGALERA 57
Query: 332 NYMRLGYETGN--NPFYLRIPHENYYRGH-HLKREYPPMTLLELQKLIDRNRVDISKPID 502
LG+ G+ P+ P E + + +REY P++L+EL +LID ++ +PID
Sbjct: 58 AKPPLGWIWGDFFRPWQRMYPGEKLFNADINTRREYIPLSLVELARLIDLGWINPRQPID 117
Query: 503 IASLIKSGLYTLNPDQKHFGVNLTD 577
I++L + + +NP + +G +LT+
Sbjct: 118 ISTLCTTQKFQINPKMRQYGFDLTE 142
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 230 IRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQR 328
+RD G I + R QHG D G GSG R
Sbjct: 116 LRDQEGKYIPDRFNRAQHGADSKREGGSGSGNR 148
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 230 IRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQR 328
+RD G I + R QHG D G GSG R
Sbjct: 116 LRDQEGKYIPDRFNRAQHGADSKREGGSGSGNR 148
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 230 IRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQR 328
+RD G I + R QHG D G GSG R
Sbjct: 93 LRDQEGKYIPDRFNRAQHGADSKREGGSGSGNR 125
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 233 RDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLRIPHENYY-RG 409
++ PG+ ++ GRG HGG + GN+ S N E+G + H N Y RG
Sbjct: 212 QNGPGTSSSRGSGRGNHGGGRRNYGNQRSLHTNN-----NESGQHSQNGHSGHRNVYSRG 266
Query: 410 HHLKREY 430
++ +Y
Sbjct: 267 NYRGNKY 273
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 233 RDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLRIPHENYY-RG 409
++ PG+ ++ GRG HGG + GN+ S N E+G + H N Y RG
Sbjct: 212 QNGPGTSSSRGSGRGNHGGGRRNYGNQRSLHTNN-----NESGQHSQNGHSGHRNVYSRG 266
Query: 410 HHLKREY 430
++ +Y
Sbjct: 267 NYRGNKY 273
>Z19154-5|CAA79557.1| 162|Caenorhabditis elegans Hypothetical
protein C40H1.6 protein.
Length = 162
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 365 CFQFHNLVSYNFDVVQNLYCLHHVCHPRV 279
C+ FHN+V Y FDV ++ + V P +
Sbjct: 68 CWYFHNMVKYEFDVEFDIPITYPVTAPEI 96
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 269 GRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPF 373
GRG +GGD+ G G G G R G + G +
Sbjct: 687 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGY 721
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 269 GRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPF 373
GRG +GGD+ G G G G R G + G +
Sbjct: 728 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGY 762
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 269 GRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPF 373
GRG +GGD+ G G G G R G + G +
Sbjct: 687 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGY 721
>AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical
protein Y67D8C.7 protein.
Length = 158
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 209 PRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGS 319
P++ + G + K G GQ GG+K+G G GS
Sbjct: 76 PKMRVRRGYSQGGGQKKSKYGGGQSGGNKYGGGGGGS 112
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 236 DNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 367
DN G + GRG +GG +G G G+G + + G +N
Sbjct: 130 DNGGGRGGNGGGRGGNGGGNNGGGRGGNGGGRPQISAGERITHN 173
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +2
Query: 245 GSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR--IPHENYYRGHHL 418
GS+ GR HGG H G + G ++ R G G + R PH G H
Sbjct: 311 GSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGHGGRHGPPHCPGRHGRHG 370
Query: 419 KREYPP 436
R + P
Sbjct: 371 SRSHSP 376
>AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform b protein.
Length = 603
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 353 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 529
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 530 Y 532
Y
Sbjct: 511 Y 511
>AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform c protein.
Length = 906
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 353 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 529
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 530 Y 532
Y
Sbjct: 511 Y 511
>AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform a protein.
Length = 1042
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 353 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 529
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 530 Y 532
Y
Sbjct: 511 Y 511
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 353 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 529
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 530 Y 532
Y
Sbjct: 511 Y 511
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 245 GSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 367
G+ + RG G GGD+ G+ N G NY G E NN
Sbjct: 304 GNSYGRNRGGGNEGGDQWGSNNNGG---DNY---GSELSNN 338
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 245 GSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 367
G+ + RG G GGD+ G+ N G NY G E NN
Sbjct: 304 GNSYGRNRGGGNEGGDQWGSNNNGG---DNY---GSELSNN 338
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 266 RGRGQHGGDKHGAGNKGSGQR 328
RG ++GGD+ G G G G R
Sbjct: 194 RGGDRYGGDRRGGGGGGGGDR 214
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 179 EKSLSMLRSLPRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMR 343
E S RS + + + R+ S+ R R +GG G G G G+ Q Y R
Sbjct: 17 ENSRGRSRSASKSPVYHRRERESSRSRSPRAR--YGGGGGGGGGGGRGRNQQYDR 69
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 329 QNYMRLGYETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQKL 463
QN+ Y N+P ++PH+ YY + P ++ KL
Sbjct: 114 QNFTSYQYANQNHP--AQLPHQKYYNSEQYALQSQPCNQYQMNKL 156
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 272 RGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFY 376
RG GGD+ G G+ G G R GY+ G F+
Sbjct: 593 RGYRGGDRGGRGSYGEGSR------GYQGGRAGFF 621
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 245 GSKITQKRGRGQHGGDKHGAGNKGSGQR 328
G + + GRG +GGD+ G G G G R
Sbjct: 567 GGRGGDRGGRGAYGGDR-GRGGSGDGSR 593
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 272 RGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFY 376
RG GGD+ G G+ G G R GY+ G F+
Sbjct: 658 RGYRGGDRGGRGSYGEGSR------GYQGGRAGFF 686
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 245 GSKITQKRGRGQHGGDKHGAGNKGSGQR 328
G + + GRG +GGD+ G G G G R
Sbjct: 632 GGRGGDRGGRGAYGGDR-GRGGSGDGSR 658
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 272 RGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFY 376
RG GGD+ G G+ G G R GY+ G F+
Sbjct: 658 RGYRGGDRGGRGSYGEGSR------GYQGGRAGFF 686
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 245 GSKITQKRGRGQHGGDKHGAGNKGSGQR 328
G + + GRG +GGD+ G G G G R
Sbjct: 632 GGRGGDRGGRGAYGGDR-GRGGSGDGSR 658
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,990
Number of Sequences: 27780
Number of extensions: 253992
Number of successful extensions: 833
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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