Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6m23
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094643-1|AAM10996.1|  261|Drosophila melanogaster AT09129p pro...   176   2e-44
AE014297-2223|AAF55326.1|  261|Drosophila melanogaster CG14899-P...   176   2e-44
AY069069-1|AAL39214.1|  245|Drosophila melanogaster GH08782p pro...    53   3e-07
AE014134-317|AAF51324.1|  245|Drosophila melanogaster CG10908-PA...    53   3e-07
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    31   1.0  
BT025007-1|ABE01237.1|  442|Drosophila melanogaster IP03362p pro...    29   4.2  

>AY094643-1|AAM10996.1|  261|Drosophila melanogaster AT09129p
           protein.
          Length = 261

 Score =  176 bits (429), Expect = 2e-44
 Identities = 82/128 (64%), Positives = 96/128 (75%)
 Frame = +1

Query: 271 LLQEYMLIPPVTRAYTTACVVTTLAVQLDLVSPFQLYFNPNLILRKYQLWRXXXXXXXXX 450
           L Q Y+ IP VTRAYTT CV+TTLAV LDLVSP QLYFNP LI+RK+Q+WR         
Sbjct: 4   LRQFYLEIPVVTRAYTTVCVLTTLAVHLDLVSPLQLYFNPTLIVRKFQIWRLATTFLYFG 63

Query: 451 XXXXXXXXXVIFTYRYCRMLEEGSFRSRTADFVVMFIFGGLLMIICAFFVNLLFLGQAFT 630
                    ++FTYRYCRMLE+GSFR R++DFV+MFIFGG+LM     FVNLLFLGQAFT
Sbjct: 64  TIGISFFFNMVFTYRYCRMLEDGSFRGRSSDFVMMFIFGGVLMTFFGIFVNLLFLGQAFT 123

Query: 631 IMIVYVWS 654
           +M+VYVWS
Sbjct: 124 LMLVYVWS 131


>AE014297-2223|AAF55326.1|  261|Drosophila melanogaster CG14899-PA
           protein.
          Length = 261

 Score =  176 bits (429), Expect = 2e-44
 Identities = 82/128 (64%), Positives = 96/128 (75%)
 Frame = +1

Query: 271 LLQEYMLIPPVTRAYTTACVVTTLAVQLDLVSPFQLYFNPNLILRKYQLWRXXXXXXXXX 450
           L Q Y+ IP VTRAYTT CV+TTLAV LDLVSP QLYFNP LI+RK+Q+WR         
Sbjct: 4   LRQFYLEIPVVTRAYTTVCVLTTLAVHLDLVSPLQLYFNPTLIVRKFQIWRLATTFLYFG 63

Query: 451 XXXXXXXXXVIFTYRYCRMLEEGSFRSRTADFVVMFIFGGLLMIICAFFVNLLFLGQAFT 630
                    ++FTYRYCRMLE+GSFR R++DFV+MFIFGG+LM     FVNLLFLGQAFT
Sbjct: 64  TIGISFFFNMVFTYRYCRMLEDGSFRGRSSDFVMMFIFGGVLMTFFGIFVNLLFLGQAFT 123

Query: 631 IMIVYVWS 654
           +M+VYVWS
Sbjct: 124 LMLVYVWS 131


>AY069069-1|AAL39214.1|  245|Drosophila melanogaster GH08782p
           protein.
          Length = 245

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
 Frame = +1

Query: 283 YMLIPPVTRAYTTACVVTTLAVQLDLVSPFQLYFNPNLILRKYQLWRXXXXXXXXXXXXX 462
           Y  +P  TR + TA VV ++  + D++    L+ + + +  K QLWR             
Sbjct: 7   YRSLPRFTRYWLTATVVLSMLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISSN 66

Query: 463 XXXXXVI---FTYRYCRMLEEGSFRSRTADFVVMFIFGGLLMIICAFFVNLLFLGQAFTI 633
                +I   F  +Y   LE+  +    AD++ + I   +L  I     N+ FL     +
Sbjct: 67  TAFHFLINCFFIVQYSSKLEKDQYSRSPADYLYLLIVSAVLANIGGMIFNVYFLMDTLVL 126

Query: 634 MIVYVW 651
            I Y+W
Sbjct: 127 AITYIW 132


>AE014134-317|AAF51324.1|  245|Drosophila melanogaster CG10908-PA
           protein.
          Length = 245

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
 Frame = +1

Query: 283 YMLIPPVTRAYTTACVVTTLAVQLDLVSPFQLYFNPNLILRKYQLWRXXXXXXXXXXXXX 462
           Y  +P  TR + TA VV ++  + D++    L+ + + +  K QLWR             
Sbjct: 7   YRSLPRFTRYWLTATVVLSMLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISSN 66

Query: 463 XXXXXVI---FTYRYCRMLEEGSFRSRTADFVVMFIFGGLLMIICAFFVNLLFLGQAFTI 633
                +I   F  +Y   LE+  +    AD++ + I   +L  I     N+ FL     +
Sbjct: 67  TAFHFLINCFFIVQYSSKLEKDQYSRSPADYLYLLIVSAVLANIGGMIFNVYFLMDTLVL 126

Query: 634 MIVYVW 651
            I Y+W
Sbjct: 127 AITYIW 132


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -3

Query: 620 CPKNNRLTKKAHIIINKPPNMNMTTKSAVLDLKEPSSSILQYLYVNITLKKKLNP 456
           C K ++LT++A  I N   NMN T  + + D     +S+   L   +    K+NP
Sbjct: 398 CQKIDKLTERAEQITNVLQNMNTTFNNQIQDNANKFNSLKDGLDATVRRTGKINP 452


>BT025007-1|ABE01237.1|  442|Drosophila melanogaster IP03362p
           protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 478 VIFTYRYCRMLEEGSFRSRTADFVVMFIFGGLLMIIC 588
           +I TY   R+++ G+       FV++F   GLL IIC
Sbjct: 366 IIATYGRQRIIDHGATYKEVGLFVIVFYCMGLLYIIC 402


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,775,131
Number of Sequences: 53049
Number of extensions: 536513
Number of successful extensions: 1048
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)