Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6m17
(552 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 92 3e-19
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 83 1e-16
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 77 1e-14
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 66 2e-11
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 57 8e-09
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 31 0.46
02_05_0863 + 32313890-32314132,32314227-32314517,32315157-323154... 30 1.1
09_04_0321 - 16664316-16664939,16665369-16666262 30 1.4
07_01_0567 - 4214196-4214351,4214539-4214845,4215005-4215069,421... 30 1.4
05_07_0219 - 28474661-28475146,28475979-28476644 30 1.4
03_03_0047 - 14046750-14046788,14046896-14047045,14047143-140472... 29 1.9
10_08_0050 + 14469879-14470072,14470620-14471094 29 2.5
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443... 29 2.5
02_01_0675 - 5028910-5030379 29 2.5
08_02_0277 - 15226062-15226169,15227075-15227203,15227416-152275... 28 5.7
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 28 5.7
07_03_0336 + 16911947-16912144,16912636-16912692,16912917-169136... 28 5.7
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 27 7.5
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 27 7.5
08_02_0260 + 14990324-14990916,14991055-14991245,14997427-149974... 27 10.0
06_03_0298 - 19272257-19273714 27 10.0
04_04_1545 - 34278266-34278586,34278685-34279114,34279225-342793... 27 10.0
04_03_0733 + 19116771-19116957,19117733-19117858,19117946-191180... 27 10.0
02_04_0215 - 20983210-20983293,20983440-20983512,20984072-209841... 27 10.0
02_01_0042 + 295608-296222,298479-298925 27 10.0
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 91.9 bits (218), Expect = 3e-19
Identities = 58/140 (41%), Positives = 81/140 (57%)
Frame = +1
Query: 127 SSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVA 306
++ A I V VIG G MGSGIAQ++A AG V L+D AL++A SI ++L R+
Sbjct: 2 ATQATAREIAVVGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLV 61
Query: 307 KKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVA 486
K Q + S+ +I + E + ADLV+EAIVE+ ++K KLF +LD +
Sbjct: 62 AK-----GQLSQASCEHSIEQIKCVSSVQEL-RDADLVIEAIVESEDIKKKLFVELDKIT 115
Query: 487 PSHTIFASNTSSLSINEIAS 546
I ASNTSS+SI +AS
Sbjct: 116 KPSAILASNTSSISITRLAS 135
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 83.0 bits (196), Expect = 1e-16
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Frame = +1
Query: 151 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKK--MYKD 324
I+ V VIGGGLMGSGIA + +V L +V+ L + +K I NL + K+ + KD
Sbjct: 309 IRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKD 368
Query: 325 NPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPSHTIF 504
+N ++ + A D ++ K D+V+EA++E I +K +F L+ V P H I
Sbjct: 369 K-------MNKAMSLLKGALDYSDF-KDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCIL 420
Query: 505 ASNTSSLSINEI 540
A+NTS++ +N +
Sbjct: 421 ATNTSTIDLNVV 432
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 76.6 bits (180), Expect = 1e-14
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Frame = +1
Query: 139 MQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNL-SRVAK-K 312
M + V ++GGGLMGSGIA + V L +V+ L I NL SRV K K
Sbjct: 310 MPRKVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGK 369
Query: 313 MYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQLDGVAPS 492
M ++ ++ V L E K DLV+EA++EN+++K ++F L+ PS
Sbjct: 370 MTEERYEKAMSLVTGVLDY--------ERFKDVDLVIEAVIENVKLKQQIFSDLEKYCPS 421
Query: 493 HTIFASNTSSLSINEI 540
H + A+NTS++ +N I
Sbjct: 422 HCVLATNTSTIDLNLI 437
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 65.7 bits (153), Expect = 2e-11
Identities = 42/143 (29%), Positives = 71/143 (49%)
Frame = +1
Query: 112 VRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTN 291
+ N S I V ++GGGLMGSGIA V L +V+ L + N
Sbjct: 298 IPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKAN 357
Query: 292 LSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQ 471
L + K+ Q ++ + L ++ D E + AD+V+EA++E++ +K K+F
Sbjct: 358 LQSLVKR-----GQMTKEDYENKLSLLSGVLDY-EQFREADVVIEAVIEDLSLKQKIFAD 411
Query: 472 LDGVAPSHTIFASNTSSLSINEI 540
L+ S+ I A+NTS++ ++ I
Sbjct: 412 LEKYCHSNCILATNTSTIDLHLI 434
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 57.2 bits (132), Expect = 8e-09
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Frame = +1
Query: 139 MQSAIKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNL-SRVAK-K 312
M + V ++GGGLMGSGIA + V L +V++ L I NL SRV K
Sbjct: 306 MPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGK 365
Query: 313 MYKDNPQEGEKFVNDSLG--RINTATDAAEASKSADLVVE---------AIVENIEVKHK 459
M K+ ++ + + R E S +++ + A+VEN++VK +
Sbjct: 366 MTKEIYEKTLSLLTGVVDYERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQ 425
Query: 460 LFKQLDGVAPSHTIFASNTSSLSINEI 540
+F L+ PSH + A+NTS++ ++ I
Sbjct: 426 VFADLERYCPSHCVLATNTSTIDLDLI 452
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 31.5 bits (68), Expect = 0.46
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 187 GSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGT 288
GS +AQ+S +G VTL D DA+ K + GT
Sbjct: 604 GSKLAQISEMSGATVTLADERPDAIEKVVRISGT 637
>02_05_0863 +
32313890-32314132,32314227-32314517,32315157-32315493,
32315944-32316278,32316763-32317010,32317296-32317881,
32317970-32318083,32318165-32318287,32318325-32318531
Length = 827
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 277 SIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAA---EASKSADLVVEAIVEN 441
S G N + MY D+ E + FV+ + ++N ATD + AS+ LV+ ++N
Sbjct: 614 SFGRNEDDLDLLMYSDSELEEQTFVDQEVEKVNLATDKSWEDYASREFTLVLSKTLKN 671
>09_04_0321 - 16664316-16664939,16665369-16666262
Length = 505
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 185 WAPA*PRYLPKQDRMLPWLTSAMMLWLKPRRALAQTSAGSQRR 313
W P L QD + WL S+ LW K R LA T + RR
Sbjct: 110 WVPDNANVLGHQDVSMAWLPSSSPLW-KHMRTLASTLLFTSRR 151
>07_01_0567 -
4214196-4214351,4214539-4214845,4215005-4215069,
4215406-4215471,4215594-4215639,4215671-4216200
Length = 389
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 160 VTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEG 339
V +GGG + + V +NVTL+D S L KA++ + N + + +D P
Sbjct: 107 VVDVGGGTGFTTLGIVKHVDNENVTLLDQSPHQLEKARQKVALNGVNIIEGDAEDLPYPT 166
Query: 340 EKF 348
+ F
Sbjct: 167 DTF 169
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 212 PKQDRMLPWLTSAMMLWLKPRRALAQTSAGSQRRCTKIIPKKER 343
P P TSA +LW +PR + G QRR ++ K+ R
Sbjct: 109 PTSPTPTPPPTSATLLWPRPRPTKEEEGEGLQRRTDAVLVKRLR 152
>03_03_0047 -
14046750-14046788,14046896-14047045,14047143-14047277,
14047615-14047673,14047755-14047871,14048035-14048073,
14048245-14048425,14049381-14049464,14049565-14049633,
14050175-14050315,14050435-14050527,14050767-14050895,
14051187-14051501
Length = 516
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +1
Query: 151 IKNVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDALAKAKKSIGTNLSRVAK--KMYKD 324
+KN+ + L G + A+ ++++VD+ L+K + + + V + K K
Sbjct: 120 LKNLKTVLESLRGRVTGKTKAELEDSISMVDILAVQLSKREAELLQQKAEVTELAKSLKL 179
Query: 325 NPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQ 471
++ +K V++ R + T+ A S V +A+ E+ ++ KQ
Sbjct: 180 ASEDAKKIVDEE--RASAHTEIESARSSVQRVQQALQEHEKMSRTTGKQ 226
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 277 SIGTNLSRVAKKMYKDNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKH 456
S+ T +S KK D P GE+ + + G +T++D + + S++++ EN+ +
Sbjct: 73 SVATAVSLSLKKSNPD-PPTGEEGADLACGFTSTSSDRSNSGNSSEMLRFCRRENLGIGS 131
Query: 457 KL-FKQLDGVAPSHT 498
+L +L+ P+H+
Sbjct: 132 ELGGGELENAGPAHS 146
>07_01_0595 -
4432642-4432926,4433062-4433769,4433964-4434164,
4434296-4435288
Length = 728
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 197 MPEPIRPPPITVTFLIALCIAEELEKFLTITL 102
+P+PI P P TV L+ AE E + TI+L
Sbjct: 64 LPDPIHPVPCTVADLVLDVDAESGEAYATISL 95
>02_01_0675 - 5028910-5030379
Length = 489
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 157 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVS 249
++ V+GGG G +AQ A+AG +V +D S
Sbjct: 69 DLAVVGGGPAGLAVAQRVAEAGLSVCAIDPS 99
>08_02_0277 -
15226062-15226169,15227075-15227203,15227416-15227583,
15227665-15228123,15228865-15229008
Length = 335
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 322 DNPQEGEKFVNDSLGRINTATDAAEASKSADLVVEAIVENIEVKHKLFKQ 471
DN V +S +I+T+ ++AEA K + ++E + + ++FK+
Sbjct: 212 DNLSRASSVVKESFSKIDTSNESAEAVKLLNTLLEGVEMTEKQLGEVFKK 261
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 133 SAMQSAIKNVTVIGGGLMGSGIAQVSAQAGQN-VTLVDVSNDALAKAKKSIGTNLSRVAK 309
+A A +V VIG G +GS Q++ G + V VDV ++ L A+ T+ AK
Sbjct: 234 AAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTVNAAK 293
Query: 310 K 312
+
Sbjct: 294 E 294
>07_03_0336 +
16911947-16912144,16912636-16912692,16912917-16913696,
16914666-16914713,16914795-16916032,16916776-16916860,
16917323-16917379
Length = 820
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Frame = +1
Query: 226 NVTLVDVSNDALAKAKKSIGTNLSRVAKKMYKDNPQEGEKFVNDSL---GRINTATDAAE 396
N+ + D+ + K +IG+ S+ AK + P DS GR N A
Sbjct: 563 NIGSITSRGDSSSDTKSNIGSVASKDAKTI-DAKPSTSSITSQDSKIGDGRSNIDGIANR 621
Query: 397 ASKSADL------VVEAIVENIEVKHKLFKQLD-GVAPSH----TIFASNTSSLSIN 534
+K+AD+ VV + N +VKH +D GV S T+ A+N S SI+
Sbjct: 622 DAKTADVKHNIRSVVNTYLRNFDVKHNTGNIVDGGVKHSDLKPGTVSAANVDSKSIS 678
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 72 LINRFENDAV*SYRKKFFKFLCNAKCYQECNGYWRWSNGLRHSPG 206
+I F A+ K +FK L N K ++ +GYW+W G S G
Sbjct: 153 VIRYFPTQALNFAFKDYFKRLFNFK--KDKDGYWKWFGGNLASGG 195
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 94 MQFKVIVRNFSSSSAMQSAIKNVTV-IGGGLMGSGIAQVSAQAGQNVTLVDVSNDA 258
MQF F+SS A+ A+ N IGG ++G G S+ G + ND+
Sbjct: 184 MQFP-FASGFASSPALSLALDNAGGGIGGRMLGGGAGAGSSAGGAMTRDTEAENDS 238
>08_02_0260 +
14990324-14990916,14991055-14991245,14997427-14997495,
14998134-14999221
Length = 646
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = +1
Query: 295 SRVAKKMYKDNPQEGEKFVND--SLGRIN 375
S +A K+ +D+ +GE F+N+ S+GRI+
Sbjct: 369 STIAVKILEDSNNDGEDFINEVSSIGRIS 397
>06_03_0298 - 19272257-19273714
Length = 485
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 154 KNVTVIGGGLMGSGIAQVSAQAGQNVTLVD 243
K V V+GGGL+G A+ + G +V++++
Sbjct: 3 KKVCVVGGGLVGLAAARELQREGHDVSVLE 32
>04_04_1545 -
34278266-34278586,34278685-34279114,34279225-34279322,
34279415-34279517,34279609-34279694,34279778-34279865,
34279950-34280063,34280147-34280235,34280369-34280484,
34280906-34280951
Length = 496
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 157 NVTVIGGGLMGSGIAQVSAQAGQNVTLVDVSNDAL 261
+V VIGGG+ G A+ + A VTL++ S D L
Sbjct: 31 SVIVIGGGISGIAAARALSNASFKVTLLE-SRDRL 64
>04_03_0733 +
19116771-19116957,19117733-19117858,19117946-19118061,
19118395-19118483,19118692-19118743,19119361-19119829,
19120985-19121367,19121450-19122132,19122561-19123152,
19123255-19123638,19124106-19124114
Length = 1029
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 327 IIFVHLLCDPAEVCANALLGFSQSIIADVNQGNILSC 217
II LCDP+ C + G S+ + A++ Q +L C
Sbjct: 476 IITGDFLCDPSSSCWAVMFGDSE-VPAEIVQAGVLRC 511
>02_04_0215 -
20983210-20983293,20983440-20983512,20984072-20984159,
20984232-20984388,20984472-20984575,20985045-20985119,
20985144-20985213
Length = 216
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 342 LSFLGIIFVHLLCDPAEVCANALLGFSQSIIADVNQGNILS 220
L+ + +I HL CDP + + LL S + ++ N+LS
Sbjct: 84 LTAVHLIDAHLCCDPGKYVSALLLSLSTMLHMELPHINVLS 124
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 FKVIVRNFSSSSAMQSAIKNVTVIGGGLMGSGIAQ--VSAQAGQNVTLVDVSNDAL 261
F+ + S+ ++ + + ++VIG G +G IAQ ++ + LVD D L
Sbjct: 22 FRPVADGGSTPTSHRRRLTKISVIGAGNVGMAIAQTILTRDMADEIALVDAVPDKL 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,830,874
Number of Sequences: 37544
Number of extensions: 259181
Number of successful extensions: 816
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -