Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6m16
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6B7C Cluster: PREDICTED: similar to CG8311-PA;...    34   3.5  
UniRef50_Q54CQ3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.5  
UniRef50_Q3YT32 Cluster: Putative uncharacterized protein; n=2; ...    33   4.6  
UniRef50_Q6Y0Q6 Cluster: Transposase; n=153; root|Rep: Transposa...    33   4.6  
UniRef50_A6QYI2 Cluster: Predicted protein; n=1; Ajellomyces cap...    33   4.6  
UniRef50_Q7RP13 Cluster: Homeobox-containing protein; n=2; Plasm...    33   6.1  

>UniRef50_UPI0000DB6B7C Cluster: PREDICTED: similar to CG8311-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG8311-PA
           - Apis mellifera
          Length = 390

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = -1

Query: 625 TSQYTICLIK--TALHIILTEMCMYPNVSTNKQILKEFKIYYF 503
           TS   ICLI   T + +I++ +C+Y  +S+ K  +K+F+  YF
Sbjct: 69  TSYSEICLIVGLTGIGLIISSICLYLRLSSEKITVKDFQAIYF 111


>UniRef50_Q54CQ3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 686

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 20/49 (40%), Positives = 28/49 (57%)
 Frame = -2

Query: 312 QKKWHGILENKLHIKFPLNRKAFEILQIIYLTYKYCDKKIIF*TLSTTI 166
           +KKW+ IL   L IK   N K   + +I+    KY DKKIIF T+ + +
Sbjct: 360 EKKWNSILFI-LEIKLYANPKNTTLSKILPKLIKYIDKKIIFETIISNV 407


>UniRef50_Q3YT32 Cluster: Putative uncharacterized protein; n=2;
           Ehrlichia canis str. Jake|Rep: Putative uncharacterized
           protein - Ehrlichia canis (strain Jake)
          Length = 916

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 513 ILNSFKICLLVLTLGYIHISVSIICNAVLIKHIVYC 620
           + N+  +C  ++  G I   V  +CN V++K+  YC
Sbjct: 636 VTNNINLCTFIIKFGIIKQMVGRLCNLVILKYFKYC 671


>UniRef50_Q6Y0Q6 Cluster: Transposase; n=153; root|Rep: Transposase
           - Staphylococcus aureus
          Length = 548

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -1

Query: 577 LTEMCMYPNVSTNKQILKEFKIYYFRNFLNKRV*E 473
           L + CM PN  +NK+I+K +   YF+  +N+++ E
Sbjct: 430 LRQQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSE 464


>UniRef50_A6QYI2 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 1187

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 357 LNFKSTAVNTWEKDIQKKWHGILENKLHIKFPLNRKAF 244
           LN K   +  W       WHGIL   LH +  LN +A+
Sbjct: 678 LNLKYPTIFAWHGSHISNWHGILREGLHFRETLNGRAY 715


>UniRef50_Q7RP13 Cluster: Homeobox-containing protein; n=2;
           Plasmodium (Vinckeia)|Rep: Homeobox-containing protein -
           Plasmodium yoelii yoelii
          Length = 380

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +2

Query: 59  NSIKHRHANLY-YAPKYFEIACNEIEHNRRTN*KYDTIVVLNV*KMIFLSQYLYVR*IIC 235
           NS  +   NL  Y P YF+    +I  N+  N   D  + L   K +  S+Y Y   IIC
Sbjct: 122 NSNNNTKINLKSYFPDYFKFTKKKIYVNKNYNNNDDCNISLKSYKYLEYSKYSY---IIC 178

Query: 236 KISKAFRFNGNLICNLFSSI 295
           K+ K +  N   +    +S+
Sbjct: 179 KLKKIYFLNSENLYQTINSV 198


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,340,687
Number of Sequences: 1657284
Number of extensions: 9915170
Number of successful extensions: 20017
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20006
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)