Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6m16
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.9  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   5.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.8  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -3

Query: 257 IEKLLKFYKLFTLHISIVIRKSFSKH*VLLSCRIF 153
           IE + K +KL      ++I KS+ +  + ++C +F
Sbjct: 105 IEVISKLHKLDNKLKHMLIWKSYKRTQIFITCELF 139


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 452 LQFK*SNGILELITRTFSHIPLLIDVINEE 363
           LQ K    +L    R +  +P++  VINEE
Sbjct: 43  LQMKYLERVLLETLRMYPPVPIITRVINEE 72


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 209 YLYVR*IICKISKAFRFNGNLI 274
           YL+V  +IC I+ AF+    LI
Sbjct: 177 YLWVLILICNIALAFKQRYQLI 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,690
Number of Sequences: 336
Number of extensions: 3033
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)