Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6m09
         (302 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical pr...    27   2.0  
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p...    27   2.6  
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ...    27   2.6  
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    25   7.9  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    25   7.9  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    25   7.9  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    25   7.9  
Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical pr...    25   7.9  
AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical ...    25   7.9  

>Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical
           protein ZK1010.4 protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = +1

Query: 31  IQRACLDPTLPYCNLGECSATPAEGCEPASGASVAPTA*YSILKH-TRKYITDTKKKIFL 207
           +  ACL   +  C    C+A PA  C P+S         Y   ++  R  +T   + IF+
Sbjct: 17  VTEACLSSGV--CGSSYCAAPPAVSCSPSSCQPGYSCGQYGCARNRARSAVTQKVEGIFI 74

Query: 208 EKT-NKKCNQK 237
           + + N K N +
Sbjct: 75  DDSGNSKENSR 85


>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
            protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 220  KKCNQKCFFTIM*SCLINMNISKF 291
            +KC  +C FT++ SC+  ++I++F
Sbjct: 1122 RKCAFECMFTLLESCVDKIDITQF 1145


>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
            protein Y102A5A.1 protein.
          Length = 1274

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +1

Query: 220  KKCNQKCFFTIM*SCLINMNISKF 291
            +KC  +C FT++ SC+  ++I++F
Sbjct: 1122 RKCAFECMFTLLESCVDKIDITQF 1145


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 43  CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 141
           C  PT+P C    C   P   C+PA      PT
Sbjct: 652 CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 684


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 43  CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 141
           C  PT+P C    C   P   C+PA      PT
Sbjct: 297 CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 329


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 43  CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 141
           C  PT+P C    C   P   C+PA      PT
Sbjct: 249 CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 281


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 43   CLDPTLPYCNLGECSATPAEGCEPASGASVAPT 141
            C  PT+P C    C   P   C+PA      PT
Sbjct: 977  CCLPTIPCCPPIPCCPQPKICCQPAPVCLPPPT 1009


>Z70271-5|CAA94233.2|  443|Caenorhabditis elegans Hypothetical
           protein W08D2.4 protein.
          Length = 443

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 46  LDPTLPYCNLGECSATPAEGCE 111
           L PT+P CNL  C     E C+
Sbjct: 388 LFPTMPRCNLNACMKYVKEWCK 409


>AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical
           protein F53H1.1 protein.
          Length = 970

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 126 ICSTDRLIFDTQTYSKIYNRYEKKNFF 206
           +C   R++  T  +SK+Y R  KKNF+
Sbjct: 243 LCHKGRMLAQTD-HSKVYYRKFKKNFY 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,258,107
Number of Sequences: 27780
Number of extensions: 108652
Number of successful extensions: 299
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)