Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6m03
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-5|AAB52668.1| 478|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AF303267-1|AAG50225.1| 478|Caenorhabditis elegans kynureninase ... 109 2e-24
Z75549-7|CAD60423.1| 306|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF098995-4|AAC67484.2| 301|Caenorhabditis elegans Hypothetical ... 28 6.0
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 28 6.0
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 27 7.9
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 27 7.9
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U56965-5|AAB52668.1| 478|Caenorhabditis elegans Hypothetical
protein C15H9.7 protein.
Length = 478
Score = 109 bits (261), Expect = 2e-24
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 20/197 (10%)
Frame = +1
Query: 76 PEFPKFLDNNDQLGHFRQRF-YIKQGT---------------IYMCGNSLGLACKDAEET 207
P +FL ++D L R F Y K GT IY+CGNSLGL K E
Sbjct: 40 PALAEFLSDSDALKEIRDLFHYPKAGTLPDADPSLVDPESDSIYLCGNSLGLMPKATGEV 99
Query: 208 LYEVLNKWKDEGIKMWNVDQGKYFLYSEFLADIMAPLVGADPDEISITGCTTINIHQTIS 387
+ + L+KW G+ + + E+ + + LVGA +E+S+ T+NIH ++
Sbjct: 100 MKDHLDKWAKMGVFGHMSGEVPWAHCDEYCLEGVGRLVGAKKEEVSVCNSLTVNIHVLLT 159
Query: 388 TFYKPTAEKYKILVDDINFPTDRYAVDGQIRLKGLNPRDAVKLVKSRDGK--FMSED--D 555
+FYKPT ++KIL++ FP+D YA++ QIRLKG +D++ ++ R+G+ +ED D
Sbjct: 160 SFYKPTETRHKILLESKAFPSDHYAIESQIRLKGRTVQDSMVCLEPREGEETLRTEDILD 219
Query: 556 IIEAMTEDVAIILLPAV 606
IE +++AI+ +
Sbjct: 220 YIEKNGDEIAIVFFSGI 236
>AF303267-1|AAG50225.1| 478|Caenorhabditis elegans kynureninase
protein.
Length = 478
Score = 109 bits (261), Expect = 2e-24
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 20/197 (10%)
Frame = +1
Query: 76 PEFPKFLDNNDQLGHFRQRF-YIKQGT---------------IYMCGNSLGLACKDAEET 207
P +FL ++D L R F Y K GT IY+CGNSLGL K E
Sbjct: 40 PALAEFLSDSDALKEIRDLFHYPKAGTLPDADPSLVDPESDSIYLCGNSLGLMPKATGEV 99
Query: 208 LYEVLNKWKDEGIKMWNVDQGKYFLYSEFLADIMAPLVGADPDEISITGCTTINIHQTIS 387
+ + L+KW G+ + + E+ + + LVGA +E+S+ T+NIH ++
Sbjct: 100 MKDHLDKWAKMGVFGHMSGEVPWAHCDEYCLEGVGRLVGAKKEEVSVCNSLTVNIHVLLT 159
Query: 388 TFYKPTAEKYKILVDDINFPTDRYAVDGQIRLKGLNPRDAVKLVKSRDGK--FMSED--D 555
+FYKPT ++KIL++ FP+D YA++ QIRLKG +D++ ++ R+G+ +ED D
Sbjct: 160 SFYKPTETRHKILLESKAFPSDHYAIESQIRLKGRTVQDSMVCLEPREGEETLRTEDILD 219
Query: 556 IIEAMTEDVAIILLPAV 606
IE +++AI+ +
Sbjct: 220 YIEKNGDEIAIVFFSGI 236
>Z75549-7|CAD60423.1| 306|Caenorhabditis elegans Hypothetical
protein T19C4.8 protein.
Length = 306
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = -3
Query: 150 TLFYVKP-LPEMSQLVVIVQKFWK-----FWSVLILVHIIKLITYVNAMF 19
+L Y P L + VVI+ WK F+ I II IT+VNAMF
Sbjct: 9 SLIYAVPSLTLYAVTVVIIILHWKNVKSSFYQFYIFEFIINTITFVNAMF 58
>AF098995-4|AAC67484.2| 301|Caenorhabditis elegans Hypothetical
protein F58E1.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +1
Query: 22 HRIY-IRYKFNNM---YEYQDGPEFPKFLDNNDQLGHFRQRFYIKQGTIYMCGNSLGLAC 189
H+++ + Y + ++ Y DG EF L NND+ +R + CG L +
Sbjct: 208 HKLFSLEYLYGSLKIQYMKADGLEFLSALHNNDECLMYRVSYETNVKVSADCGMWLVVVL 267
Query: 190 KDAEETLY 213
KD + L+
Sbjct: 268 KDLQRVLF 275
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 94 LDNNDQLGHFRQRFYIKQGTIYMCGNSLGLACKDAEETLYEVLNKWKDEGIKMWNVDQGK 273
LD+ D LG+ + Y G + N L KDA TL + L W++ I++ ++
Sbjct: 781 LDSGDVLGYVVR--YRLAGYSSLTWNEKNLTTKDARNTLVDELITWREYEIQVAAYNKRG 838
Query: 274 YFLYSE 291
++SE
Sbjct: 839 LGVFSE 844
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 229 WKDEGIKMWNVDQGKYFLYSEFLADIMAPLVGAD 330
WK + +K W++D +L S + D+ L+G D
Sbjct: 215 WKRKTVKEWSLDDVLLWLQSAQMDDVAGLLIGYD 248
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 229 WKDEGIKMWNVDQGKYFLYSEFLADIMAPLVGAD 330
WK + +K W++D +L S + D+ L+G D
Sbjct: 394 WKRKTVKEWSLDDVLLWLQSAQMDDVAGLLIGYD 427
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 229 WKDEGIKMWNVDQGKYFLYSEFLADIMAPLVGAD 330
WK + +K W++D +L S + D+ L+G D
Sbjct: 362 WKRKTVKEWSLDDVLLWLQSAQMDDVAGLLIGYD 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,176,158
Number of Sequences: 27780
Number of extensions: 301934
Number of successful extensions: 849
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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