Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6l13
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061591-1|AAL29139.1|  849|Drosophila melanogaster SD04273p pro...   174   9e-44
AE014298-1592|AAF48028.3|  886|Drosophila melanogaster CG1597-PA...   174   9e-44
AY119278-1|AAM51138.1|  604|Drosophila melanogaster SD26982p pro...    29   5.0  
AE014134-3157|AAF53841.1|  604|Drosophila melanogaster CG10463-P...    29   5.0  

>AY061591-1|AAL29139.1|  849|Drosophila melanogaster SD04273p
           protein.
          Length = 849

 Score =  174 bits (423), Expect = 9e-44
 Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
 Frame = +2

Query: 224 ILSLWKTLVGFICLVVAIYGGVVGYLETRVNTPFDDVKVVQKSGLEVPDRYWGTYRPGVY 403
           IL  WKT++G +CL +A Y G +GYLETRVNTPFD  K+V  +GLE PDRYWG+YRP  Y
Sbjct: 54  ILDKWKTMIGCVCLAIASYFGYLGYLETRVNTPFDHQKMVVHAGLEQPDRYWGSYRPLTY 113

Query: 404 LGMKSREPWSPVFGLMWYELA--AAAQKGIRHWCDQGDNLPTYGWLRHDGVTFGEQLISD 577
            GMK+R+P S V GLMWY  +      +GIRHWC+QGD L +YGW  HDG +FG Q I D
Sbjct: 114 FGMKTRDPHSLVMGLMWYTPSNLGPGGQGIRHWCEQGDKLDSYGWTHHDGRSFGVQEIQD 173

Query: 578 PPHQIVTSFVK 610
            P ++ TSFVK
Sbjct: 174 LPFELKTSFVK 184


>AE014298-1592|AAF48028.3|  886|Drosophila melanogaster CG1597-PA
           protein.
          Length = 886

 Score =  174 bits (423), Expect = 9e-44
 Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
 Frame = +2

Query: 224 ILSLWKTLVGFICLVVAIYGGVVGYLETRVNTPFDDVKVVQKSGLEVPDRYWGTYRPGVY 403
           IL  WKT++G +CL +A Y G +GYLETRVNTPFD  K+V  +GLE PDRYWG+YRP  Y
Sbjct: 91  ILDKWKTMIGCVCLAIASYFGYLGYLETRVNTPFDHQKMVVHAGLEQPDRYWGSYRPLTY 150

Query: 404 LGMKSREPWSPVFGLMWYELA--AAAQKGIRHWCDQGDNLPTYGWLRHDGVTFGEQLISD 577
            GMK+R+P S V GLMWY  +      +GIRHWC+QGD L +YGW  HDG +FG Q I D
Sbjct: 151 FGMKTRDPHSLVMGLMWYTPSNLGPGGQGIRHWCEQGDKLDSYGWTHHDGRSFGVQEIQD 210

Query: 578 PPHQIVTSFVK 610
            P ++ TSFVK
Sbjct: 211 LPFELKTSFVK 221


>AY119278-1|AAM51138.1|  604|Drosophila melanogaster SD26982p
           protein.
          Length = 604

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 389 RPGVYLGMKSREPWSPVFGLMWYELAAAAQKGIRHW 496
           +P ++  +K ++ WSP  G  +  L      G+ HW
Sbjct: 481 KPWIFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHW 516


>AE014134-3157|AAF53841.1|  604|Drosophila melanogaster CG10463-PA
           protein.
          Length = 604

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 389 RPGVYLGMKSREPWSPVFGLMWYELAAAAQKGIRHW 496
           +P ++  +K ++ WSP  G  +  L      G+ HW
Sbjct: 481 KPWIFQEIKEKQAWSPSSGQRYEMLQKFCNYGLEHW 516


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,732,451
Number of Sequences: 53049
Number of extensions: 580844
Number of successful extensions: 1174
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)