Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6l13
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical p...    89   2e-18
Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical p...    89   2e-18
Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z79604-5|CAO82054.1|  197|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA...    28   6.1  
AL132902-9|CAC14424.1|  455|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC024783-3|AAL32245.1|  273|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC024783-2|AAL32246.1|  275|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical
           protein F13H10.4c protein.
          Length = 792

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +2

Query: 377 WGTYRPGVYLGMKSREPWSPVFGLMWYELAAAAQK-GIRHWCDQGDNLPTYGWLRHDGVT 553
           WGTYRP +Y G+++R P SP+FG+MWYE     Q+  IRHWC+Q D LP Y W   DG  
Sbjct: 82  WGTYRPHMYFGLRTRSPMSPLFGMMWYEQPNTIQRPHIRHWCNQDDRLPGYYWYEADGRH 141

Query: 554 FGEQLISD 577
           FG+Q IS+
Sbjct: 142 FGKQNISE 149


>Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical
           protein F13H10.4b protein.
          Length = 789

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +2

Query: 377 WGTYRPGVYLGMKSREPWSPVFGLMWYELAAAAQK-GIRHWCDQGDNLPTYGWLRHDGVT 553
           WGTYRP +Y G+++R P SP+FG+MWYE     Q+  IRHWC+Q D LP Y W   DG  
Sbjct: 82  WGTYRPHMYFGLRTRSPMSPLFGMMWYEQPNTIQRPHIRHWCNQDDRLPGYYWYEADGRH 141

Query: 554 FGEQLISD 577
           FG+Q IS+
Sbjct: 142 FGKQNISE 149


>Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical
           protein F13H10.4a protein.
          Length = 796

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +2

Query: 377 WGTYRPGVYLGMKSREPWSPVFGLMWYELAAAAQK-GIRHWCDQGDNLPTYGWLRHDGVT 553
           WGTYRP +Y G+++R P SP+FG+MWYE     Q+  IRHWC+Q D LP Y W   DG  
Sbjct: 89  WGTYRPHMYFGLRTRSPMSPLFGMMWYEQPNTIQRPHIRHWCNQDDRLPGYYWYEADGRH 148

Query: 554 FGEQLISD 577
           FG+Q IS+
Sbjct: 149 FGKQNISE 156


>Z79604-5|CAO82054.1|  197|Caenorhabditis elegans Hypothetical
           protein ZK662.6 protein.
          Length = 197

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 80  LDKLIDTSFLISIKIYIDYKSTRLC 6
           +D++ID    IS K YI + ST+ C
Sbjct: 46  IDEIIDVKSCISFKFYITHDSTQKC 70


>U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform a protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -2

Query: 443 QKLGTMAPDFSYLSIHQVCM-CP-NIDQAPQDQIFVQP*RRQTACLLSSLSNPPHRR 279
           +K G+MA D      H VC  C   +DQ    + F  P R    C      +PPHRR
Sbjct: 9   RKSGSMADDTGE---HPVCFNCTLRVDQTIHVKCFECPLRICILCFQCGAESPPHRR 62


>AL132902-9|CAC14424.1|  455|Caenorhabditis elegans Hypothetical
           protein Y71A12B.10 protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 485 FLFEQQQQAHTTLDQKLGTMAPDFSYLSIHQVC 387
           + FE     +T  D ++G +A D+   +IH +C
Sbjct: 64  YTFETPPNGYTEEDMQMGFIATDWMISTIHDIC 96


>AC024783-3|AAL32245.1|  273|Caenorhabditis elegans Hypothetical
           protein Y45G5AL.1a protein.
          Length = 273

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +2

Query: 503 QGDNLPTYGWLRHDGVTFGEQLISDPPHQ 589
           QG+  P Y  LRHD VT     I DPP Q
Sbjct: 15  QGEEEPPYSQLRHDSVT----PIRDPPLQ 39


>AC024783-2|AAL32246.1|  275|Caenorhabditis elegans Hypothetical
           protein Y45G5AL.1b protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +2

Query: 503 QGDNLPTYGWLRHDGVTFGEQLISDPPHQ 589
           QG+  P Y  LRHD VT     I DPP Q
Sbjct: 15  QGEEEPPYSQLRHDSVT----PIRDPPLQ 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,130,728
Number of Sequences: 27780
Number of extensions: 290966
Number of successful extensions: 663
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)