Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6l08
(617 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomy... 189 2e-49
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 29 0.71
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos... 27 2.2
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 3.8
SPCC338.14 |||adenosine kinase |Schizosaccharomyces pombe|chr 3|... 26 3.8
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 26 3.8
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 26 5.0
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 5.0
SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces pomb... 25 8.8
>SPAC806.07 |ndk1||nucleoside diphosphate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 151
Score = 189 bits (461), Expect = 2e-49
Identities = 85/148 (57%), Positives = 109/148 (73%)
Frame = +3
Query: 93 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 272
E+TFI VKPD VQRGL+G II +FE KG+KL LKF+ PS +L+++HY++ +PF+ L
Sbjct: 4 EQTFIAVKPDAVQRGLIGYIISKFELKGYKLRALKFLVPSRDLVEEHYAEHKGKPFYEKL 63
Query: 273 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 452
V +M+SGPV M+WEG VKTGR MLGA+NP DS PGTIRGD I +GRN+ HGSDS+E
Sbjct: 64 VGFMASGPVCAMIWEGKQAVKTGRLMLGASNPLDSAPGTIRGDYGIDLGRNVCHGSDSIE 123
Query: 453 SAKKEIGLWFTDKEVVGWTPANENWVYE 536
SA +EI LWF E+ + E W+YE
Sbjct: 124 SANREIKLWFQPSEIQVYDRTIEPWIYE 151
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 28.7 bits (61), Expect = 0.71
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -1
Query: 224 EKFF*WPYE--FQTD*FEAFLFETFNNGAHKTTLYTIRLNHNKSTLTLFRHHEILLTCSI 51
++F W Y+ ++ D L ET N K T+RL H L+LF S+
Sbjct: 283 DQFTDWLYQRWYEKDKLIDTLLETGNFPGPKKLHTTVRLKHRLEILSLF---------SV 333
Query: 50 NYTCTTAGNDLKSF 9
+TC AG LK F
Sbjct: 334 LFTCIVAGLFLKLF 347
>SPCC1235.12c |mug146||meiotically upregulated gene
Mug46|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 2.2
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -1
Query: 497 NFFVRKPEAYFLFSRFNAVRTMDDVTPNLNAEITADSAGLRVSWVSC-AKHLTASLHNIK 321
N FV P R + RT+ TP+L E ++ R+S V C H +S N
Sbjct: 5 NTFVDYPTTQVRKERVHTYRTLTSATPSL--EFFSNENTNRLSEVQCKLTHFLSSSENSS 62
Query: 320 ALPYHRDHR 294
++ R H+
Sbjct: 63 SVRNTRTHK 71
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 178 KPFFSKRSIMVPTRPRCTPSGLT 110
KPF +KRS ++P RP T L+
Sbjct: 512 KPFVNKRSKVLPLRPSVTHDNLS 534
>SPCC338.14 |||adenosine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -3
Query: 600 NHRMFNINYENKTKYTD*NKFTHKPSFHLQVSSPQLLC 487
N+++ ++ N K+ + K + FHL VS +LC
Sbjct: 136 NYKLKDLQQPNVWKFVEEAKVIYVGGFHLTVSPESMLC 173
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +3
Query: 270 LVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQP--GTIRGDLCIQVGR--NIIH 434
L++ P++ V GL +++ G ++ T+P+ GT+ GD C+++G NI+H
Sbjct: 349 LLRLKDKHPLIVDV-RGLGLLQ-GIEIASCTDPSKPSDFLGTVIGDKCLELGMNCNIVH 405
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 370 AGLVAPSI*RPVFTTLRPSHTIGTTGPELMYFTRPGKKGR 251
+G + P RP T+L P T+ TT + RP K +
Sbjct: 358 SGSLTPLSSRPAHTSLPPIPTVQTTSSNVPPVNRPSLKSK 397
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -1
Query: 158 FNNGAHKTTLYTIRLNHNKSTLTLFRHHEILLTCSINYTCTTAGNDLKSFNL 3
F NG + T +N+N + +H +L ++ T + +DLK+F+L
Sbjct: 435 FQNGHNICTFAKWCINNNLDEPSNLKHFREMLDYYSSHNVTISEDDLKNFSL 486
>SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 8.8
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +3
Query: 300 VPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNI----IHGSDSVESAKKE 467
+ V EG N + GRQ+L T+P + + +G I H SD + + +
Sbjct: 388 ITWVSEGANTMDRGRQLLEVTHPRGRLDAGTMSTMGVGMGYAIASAFAHSSDKIVVVEGD 447
Query: 468 IGLWFTDKEV 497
F+ E+
Sbjct: 448 SAFGFSAMEL 457
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,460,121
Number of Sequences: 5004
Number of extensions: 49211
Number of successful extensions: 126
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -