Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6l05
         (294 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical ...    28   1.0  
Z99288-1|CAB16545.2|  339|Caenorhabditis elegans Hypothetical pr...    27   1.8  
L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid desa...    26   5.4  
AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical ...    26   5.4  
Z66565-3|CAA91479.1|  177|Caenorhabditis elegans Hypothetical pr...    25   7.1  

>AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical
           protein C45H4.13 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 1.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 118 YGFRFNNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWG 8
           YG+ +NN+ +  NY+  NS+     RSC   S+S  G
Sbjct: 311 YGYGYNNNYYSGNYYCCNSY-----RSCWRQSYSCSG 342


>Z99288-1|CAB16545.2|  339|Caenorhabditis elegans Hypothetical
           protein ZK262.1 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 148 SCSGFCSDSFYGFRFNNHNFFCNYFWL 68
           SC  F + S  G   N  N FCN+FW+
Sbjct: 107 SCQ-FLTISIAGIFENRFNTFCNFFWV 132


>L41807-1|AAA67369.1|  402|Caenorhabditis elegans fatty acid
           desaturase protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 130 SDSFYGFRFN-NHNFFCNYFWLN 65
           SD+ YG++   N++FF  + W N
Sbjct: 353 SDTQYGYKSQVNYDFFARFLWFN 375


>AL132951-8|CAC44309.1|  402|Caenorhabditis elegans Hypothetical
           protein Y67H2A.8 protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 130 SDSFYGFRFN-NHNFFCNYFWLN 65
           SD+ YG++   N++FF  + W N
Sbjct: 353 SDTQYGYKSQVNYDFFARFLWFN 375


>Z66565-3|CAA91479.1|  177|Caenorhabditis elegans Hypothetical
           protein T04F8.3 protein.
          Length = 177

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 133 CSDSFYGFRFNNHNFFCNYFWLNSF 59
           CS   Y F F   +F  +YF+ NSF
Sbjct: 134 CSILEYNFFFLQFSFLSSYFYSNSF 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,345,727
Number of Sequences: 27780
Number of extensions: 65760
Number of successful extensions: 131
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)