Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6k04
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 39 0.003
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 37 0.011
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 37 0.011
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 37 0.011
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 37 0.014
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 36 0.032
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 33 0.13
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 33 0.13
Z99273-2|CAB16475.1| 117|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z83216-10|CAB62779.1| 117|Caenorhabditis elegans Hypothetical p... 32 0.30
U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical pr... 31 0.92
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 30 1.6
U39667-5|AAC69008.1| 190|Caenorhabditis elegans Hypothetical pr... 29 2.1
U42844-8|AAB53820.1| 400|Caenorhabditis elegans Hypothetical pr... 29 2.8
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 4.9
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 4.9
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 28 4.9
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 4.9
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 4.9
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 4.9
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 28 4.9
Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical pr... 28 6.5
U01918-1|AAA85278.1| 359|Caenorhabditis elegans dpy-20 protein. 28 6.5
Z93381-4|CAB07607.2| 382|Caenorhabditis elegans Hypothetical pr... 27 8.6
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 8.6
U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical pr... 27 8.6
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 306 VIKKILETGGGMPLHD-GCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDI 482
V+K I + G G+ G TV + + G EN + + + +L ++ G D+
Sbjct: 16 VLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDL 75
Query: 483 AVRSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIKL 608
V +M GE++ F YG+ G PP+I + +F ++L
Sbjct: 76 GVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 5/155 (3%)
Frame = +3
Query: 186 NDDNDTTESK-----VFKTIDILGEPVKNFEVLKNELIPVDENHYVIKKILETGGGMPLH 350
++D D E K F + + P + + +E + + H V + G LH
Sbjct: 111 DEDGDEVEGKGETLYYFVELKSIFRPKPGAKWITDEGVHIHITHEVEGCTEKAQAGDTLH 170
Query: 351 DGCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFS 530
T+++ + ++ S N P + ++ G+DIA+ M GE +
Sbjct: 171 QQYTLNLEDGSFIDSS------WSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVIP 224
Query: 531 YKVMYGEMGIPPRIKPKSDCVFYIKLVKSMLTPKE 635
++ YGE G PP I S F + L K + KE
Sbjct: 225 PELAYGENGRPPAIPGNSYLHFDLSLEKLVRPGKE 259
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 426 NNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIK 605
N T L ++ G D + +M VGE + + YGE G PP+I S F ++
Sbjct: 69 NEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVE 128
Query: 606 LVK 614
L+K
Sbjct: 129 LMK 131
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +3
Query: 351 DGCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFS 530
+G TV+ + EN + P + ++ G D V M VGE S S
Sbjct: 19 NGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTIS 78
Query: 531 YKVMYGEMGIPPRIKPKSDCVFYIKLV 611
+ YG G+PP+I + VF ++L+
Sbjct: 79 ADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +3
Query: 351 DGCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFS 530
+G TV+ + EN + P + ++ G D V M VGE S S
Sbjct: 19 NGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTIS 78
Query: 531 YKVMYGEMGIPPRIKPKSDCVFYIKLV 611
+ YG G+PP+I + VF ++L+
Sbjct: 79 ADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 429 NPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMG 557
NP+ + ++PGLDI + M VGEI+ F S K YG G
Sbjct: 127 NPIIFKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAG 169
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 35.5 bits (78), Expect = 0.032
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 420 SLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFY 599
S N P L++ ++ G+DIA+ M GE + + YG G PP I + F
Sbjct: 188 SRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFE 247
Query: 600 IKLVK 614
I L K
Sbjct: 248 IVLEK 252
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 432 PMTVDLKDSGLLPGLDIAVRSMLVGEI 512
P T L + ++PG+D A+R M +GEI
Sbjct: 77 PYTFTLGRNQVIPGMDRAMRGMCIGEI 103
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 420 SLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFY 599
S N P L ++ ++ G+DIA+ M GE + YG+ G P I K+ F
Sbjct: 193 SRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFD 252
Query: 600 IKLVK 614
I L K
Sbjct: 253 ITLEK 257
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 420 SLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFY 599
S N P L ++ ++ G+DIA+ M GE + YG+ G P I K+ F
Sbjct: 229 SRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFD 288
Query: 600 IKLVK 614
I L K
Sbjct: 289 ITLEK 293
>Z99273-2|CAB16475.1| 117|Caenorhabditis elegans Hypothetical
protein Y45F10C.2 protein.
Length = 117
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 78 CVTKFKMCTVTLENGLDLRECTTTGSI 158
CVTK K CT+ NG+ ECT +G++
Sbjct: 29 CVTKAKSCTMFFLNGVYCTECTYSGTL 55
>Z83216-10|CAB62779.1| 117|Caenorhabditis elegans Hypothetical
protein C08F11.12 protein.
Length = 117
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 78 CVTKFKMCTVTLENGLDLRECTTTGSI 158
CVTK K CT+ NG+ ECT +G++
Sbjct: 29 CVTKAKSCTMFFLNGVYCTECTYSGTL 55
>U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical
protein T19H12.6 protein.
Length = 619
Score = 30.7 bits (66), Expect = 0.92
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 276 ELIPVDENHYVIKKILETGGGMPLHDGCTVSIAFSGYWENELQPFDVMSLNNPMTV 443
E+ +DEN+ + +L G G + + +W N+L+ FDV + N P+++
Sbjct: 527 EVFVIDENNMTVSVLLSLGDDF----GSLIYSSSGFFWNNKLRYFDVKNENVPLSL 578
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 186 NDDNDTTESKVFKTIDIL-GEPVKNF--EVLKNELIPVDENHYVIKKILETGGGMPLHDG 356
+DD T+ +K I I G+ + L+ LI D+N Y++ ++L GG L D
Sbjct: 741 DDDLQNTDGANYKCIKIENGDRMPQLVARALEKHLIEDDKNTYLLVQLLPRGGEFVLPDN 800
Query: 357 C 359
C
Sbjct: 801 C 801
>U39667-5|AAC69008.1| 190|Caenorhabditis elegans Hypothetical
protein C18A11.4 protein.
Length = 190
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 291 DENHYVIKKILETGGGMPL 347
DE HYV+ K+L+ GG +PL
Sbjct: 32 DERHYVLCKVLKNGGFVPL 50
>U42844-8|AAB53820.1| 400|Caenorhabditis elegans Hypothetical
protein C08A9.8 protein.
Length = 400
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 499 SIDLTAISSPGSKPLSLRSTVIGLFKLITSNGCNSFSQYPENAIET 362
S +T SP + L +ST+ G + N C F QYP I+T
Sbjct: 59 SASITTERSP--RNLGQKSTIFGKELAKSGNNCKHFIQYPNKQIKT 102
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 330 GGGMPLHDGCTVSIAFSGYWENELQPFDVMSLNNPMTVD 446
G G+P+H V+ A GY+ +P V L P T++
Sbjct: 344 GPGIPIHQQYPVAPAAGGYFNQGPRPEQVQGLPPPRTIE 382
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 520 NSDIS-PTSIDLTAISSPGSKPLSLRSTVIGLFKLITSNGCNSFSQYPENAIETV 359
N D++ T I + I P S L TV + S GC Q+P + IE++
Sbjct: 101 NGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESI 155
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 168 NEIYEENDDNDTTESKVFKTIDILGEPVKNFEVLKNELIPVDENHYVIKKILET 329
++I E + + +++ KTI +L E +K E+ + L ++ V+K+++E+
Sbjct: 1127 DKITEITAEKNRQKNEAQKTIRVLSEQIKVLEIEQKNLSQNKDSQQVVKEMIES 1180
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 168 NEIYEENDDNDTTESKVFKTIDILGEPVKNFEVLKNELIPVDENHYVIKKILET 329
++I E + + +++ KTI +L E +K E+ + L ++ V+K+++E+
Sbjct: 1127 DKITEITAEKNRQKNEAQKTIRVLSEQIKVLEIEQKNLSQNKDSQQVVKEMIES 1180
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +3
Query: 168 NEIYEENDDNDTTESKVFKTIDILGEPVKNFEVLKNELIPVDENHYVIKKILET 329
++I E + + +++ KTI +L E +K E+ + L ++ V+K+++E+
Sbjct: 1127 DKITEITAEKNRQKNEAQKTIRVLSEQIKVLEIEQKNLSQNKDSQQVVKEMIES 1180
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 637 PSFGVSILLTNLI*NTQSDFGFILGGIPISPYITLYENKNSDISPTSIDLT 485
PS V + L + I T+ F +L + L+E KN D+SPTS D T
Sbjct: 127 PSLEVDLNLGHPIDATREKFDTVLSSVNNH----LHETKNMDLSPTSRDST 173
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 637 PSFGVSILLTNLI*NTQSDFGFILGGIPISPYITLYENKNSDISPTSIDLT 485
PS V + L + I T+ F +L + L+E KN D+SPTS D T
Sbjct: 127 PSLEVDLNLGHPIDATREKFDTVLSSVNNH----LHETKNMDLSPTSRDST 173
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 637 PSFGVSILLTNLI*NTQSDFGFILGGIPISPYITLYENKNSDISPTSIDLT 485
PS V + L + I T+ F +L + L+E KN D+SPTS D T
Sbjct: 127 PSLEVDLNLGHPIDATREKFDTVLSSVNNH----LHETKNMDLSPTSRDST 173
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1
Query: 637 PSFGVSILLTNLI*NTQSDFGFILGGIPISPYITLYENKNSDISPTSIDLT 485
PS V + L + I T+ F +L + L+E KN D+SPTS D T
Sbjct: 127 PSLEVDLNLGHPIDATREKFDTVLSSVNNH----LHETKNMDLSPTSRDST 173
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +3
Query: 366 SIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSY 533
S+ SG W++ ++ +D S N + S + +D+ ++LVG +F Y
Sbjct: 122 SLIVSGGWDSSVKLWDARSYGNGAIESVNVSSSVYAMDVLKHTILVGTKDRKIFMY 177
>Z81119-2|CAB03332.1| 350|Caenorhabditis elegans Hypothetical
protein T10H4.3 protein.
Length = 350
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 142 VHSRRSSPFSKVTVHILNFVTQNFRFIVGFFIRRSQLTFTVLSV 11
+ +R++ K + +LNF Q F FIVG F R S V+++
Sbjct: 70 IKDQRNTKCVKKQLVVLNFTEQCFTFIVGVFRRCSAWIALVMAL 113
>Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical
protein T22B3.1 protein.
Length = 440
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 129 LRECTTTGSILHINEIYEENDDNDTTESKVFKTIDILGEPVKNFEVLKNEL--IPVDENH 302
+R T H+ + ++ T + K+F+ D+ ++EV N L +PV N
Sbjct: 163 VRSACATNMTKHLERHHADDYQKVTGQLKLFRMNDVGIRSKMHYEVADNPLSTLPVVTNS 222
Query: 303 YVIKKI 320
Y++ K+
Sbjct: 223 YILPKM 228
>U01918-1|AAA85278.1| 359|Caenorhabditis elegans dpy-20 protein.
Length = 359
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 129 LRECTTTGSILHINEIYEENDDNDTTESKVFKTIDILGEPVKNFEVLKNEL--IPVDENH 302
+R T H+ + ++ T + K+F+ D+ ++EV N L +PV N
Sbjct: 163 VRSACATNMTKHLERHHADDYQKVTGQLKLFRMNDVGIRSKMHYEVADNPLSTLPVVTNS 222
Query: 303 YVIKKI 320
Y++ K+
Sbjct: 223 YILPKM 228
>Z93381-4|CAB07607.2| 382|Caenorhabditis elegans Hypothetical
protein F28G4.4 protein.
Length = 382
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -1
Query: 586 SDFGFILGGIPISPYITLYENKNSDI 509
++F +L +P +PY+ LY++ N D+
Sbjct: 65 NEFAAVLKTMPKAPYLILYDSSNVDV 90
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +3
Query: 225 TIDILGEPVKNFEVLKNELIPVDENHYVIKKILETGGGMPLHDGCTVSIAFSGYWENELQ 404
T+D + + E D + ++KK++ +P+ DGC + G ++E
Sbjct: 1909 TVDTTNLSRDEYSKYQRECQKPDASVVLVKKLVINKENVPVKDGC-YNRDVDGMSDDEYS 1967
Query: 405 PFDVMSLNNPMT 440
++V L +P T
Sbjct: 1968 EYEVRCLGHPST 1979
>U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical
protein W06B11.3 protein.
Length = 236
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1
Query: 121 PFSKVTVHILNFVTQNFRFIVGFFIRRSQLTFTVLSVFDT 2
P+S+ H+L F R +GF + R ++T TVLSVF T
Sbjct: 117 PYSERAQHLLGF-----RDEMGF-VMREKITLTVLSVFTT 150
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 171 EIYEENDDNDTTES-KVFKTIDILGEPVKNFEVLKNELIPVD 293
EI +E + N T ++ K+ +T+D L E V N E EL ++
Sbjct: 155 EILQEENSNLTAKNEKLEETVDDLHEKVANLETSNKELTEIN 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,726,712
Number of Sequences: 27780
Number of extensions: 314686
Number of successful extensions: 916
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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