Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6j18
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z92781-1|CAB07180.2| 250|Caenorhabditis elegans Hypothetical pr... 41 0.001
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z92825-2|CAB07315.1| 266|Caenorhabditis elegans Hypothetical pr... 32 0.33
U28732-4|AAB04900.1| 257|Caenorhabditis elegans Hypothetical pr... 32 0.33
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 31 0.58
U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical p... 31 1.0
AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical ... 31 1.0
AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical ... 31 1.0
U97012-2|AAK39140.1| 241|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical ... 29 3.1
AF077540-3|AAC26312.2| 421|Caenorhabditis elegans C-type lectin... 29 3.1
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 28 5.4
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical... 28 7.1
AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical... 28 7.1
Z99773-4|CAB16925.1| 342|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z99773-1|CAB16923.2| 406|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50110-5|CAA90447.1| 342|Caenorhabditis elegans Hypothetical pr... 27 9.4
U88184-12|AAM98020.1| 570|Caenorhabditis elegans Hypothetical p... 27 9.4
AL132846-4|CAB60347.1| 328|Caenorhabditis elegans Hypothetical ... 27 9.4
AF083878-1|AAD48898.1| 342|Caenorhabditis elegans cyclin-depend... 27 9.4
AF002198-7|AAF99935.1| 693|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z92803-9|CAC35822.1| 248|Caenorhabditis elegans Hypothetical
protein K01G5.10 protein.
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +1
Query: 388 NDVIHLLETLR-EDYLLGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIF 564
+D L+ LR + +L +I+N SR + + + L F ++SG++ +EKPD+ IF
Sbjct: 128 SDTRQTLQKLRLKGIILVVISNFDSRLK-SLLSQFNLLDLFSMTVLSGEIGYEKPDEKIF 186
Query: 565 HEACKLLN-VEPRNCIMVGDKLETDIKGGK 651
+ + P + +GD L+ D G K
Sbjct: 187 QLVVNHFDLISPSEILHIGDNLKNDFHGAK 216
>Z92781-1|CAB07180.2| 250|Caenorhabditis elegans Hypothetical
protein F09C3.2 protein.
Length = 250
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +1
Query: 391 DVIHLLETLREDYLLGLITNGPSRAQ-WQKIERLGLRKYFDCVLVSGDLPW-EKPDQHIF 564
D+ L TL+ + + SRA ++ ++ + + D ++ D+ KP H
Sbjct: 114 DMPALFTTLKSMGIKIAVCTADSRAATMDQMNKMNVIPFLDDIICGNDVGIVPKPSPHCA 173
Query: 565 HEACKLLNVEPRNCIMVGDKLETDIKGGKEAELAATV 675
+ CK L VE + +MVGD + D+K GK A L A+V
Sbjct: 174 IQICKRLGVELKETLMVGDTI-ADLKMGKIAGLRASV 209
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 36.3 bits (80), Expect = 0.020
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +1
Query: 364 RFRYLALTNDVIHLLETLR-EDYLLGLITNG--PSRAQWQKIERLGLRKYFDCVLVSGDL 534
+ ++ L +++ L+++LR Y LITN RA+ + FD VL S L
Sbjct: 90 QIQHTPLLPEMVELIKSLRLAGYRTILITNNFYTDRARLLPTVPSQVGLLFDDVLESCRL 149
Query: 535 PWEKPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKE 654
KPD I+ A + + P +C+ + D L +++K KE
Sbjct: 150 GLRKPDTKIYELALERSKLHPSDCVFL-DDLGSNLKSAKE 188
>Z92825-2|CAB07315.1| 266|Caenorhabditis elegans Hypothetical
protein C13C4.4 protein.
Length = 266
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 544 KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKEA 657
KP + F + L ++P +MVGD L +D+ GG +A
Sbjct: 185 KPSRFYFEQGMNALGMKPEEIVMVGDDLMSDV-GGAQA 221
>U28732-4|AAB04900.1| 257|Caenorhabditis elegans Hypothetical
protein F45E1.3 protein.
Length = 257
Score = 32.3 bits (70), Expect = 0.33
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 478 IERLGLRKYFDCVLVSGDLPWE-KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKE 654
++R+ + D ++ D KP H + CK L V+ IMVGD D++
Sbjct: 159 LKRMNVDHLVDMIVCGDDKNTAPKPSPHNAIKICKHLGVDQSKAIMVGD-TRVDMEMAHN 217
Query: 655 AELAATVWI 681
AEL A V +
Sbjct: 218 AELGAAVGV 226
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 544 KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIK-GGKEAELAAT 672
KP + + + +V+P+ +M GD+L+TDI G +L+AT
Sbjct: 222 KPHKPMADFLLRRAHVDPKRTVMFGDRLDTDIMFGNANGQLSAT 265
>U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical
protein K09H11.7 protein.
Length = 322
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 544 KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKE 654
KP F+ + N+ P +M+GD+ TD+K G++
Sbjct: 236 KPCTPAFNYIKRKWNINPSRTMMIGDRTNTDVKFGRD 272
>AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical
protein C53A3.2 protein.
Length = 349
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 544 KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKE 654
KP F+ + N+ P +M+GD+ TD+K G++
Sbjct: 263 KPCTPAFNYIKRKWNINPSRTMMIGDRTNTDVKFGRD 299
>AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical
protein F44E7.2 protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 544 KPDQHIFHEACKLLNVEPRNCIMVGDKLETDIKGGKE 654
KP F+ + N+ P +M+GD+ TD+K G++
Sbjct: 253 KPCTPAFNYIKRKWNINPSRTMMIGDRTNTDVKFGRD 289
>U97012-2|AAK39140.1| 241|Caenorhabditis elegans Hypothetical
protein C04E6.7 protein.
Length = 241
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 493 LRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVGD 621
+ KYFD V+ S +KPD + A ++V+P I + D
Sbjct: 162 MEKYFDHVIESCKEGVKKPDPRFYQIALDCVDVQPEEVIYIDD 204
>AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical
protein Y67A10A.9 protein.
Length = 734
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 142 TKACNKLVELLQNEYGLPKDMAVESGSTFLRAFRARPDDESYALHEWPAHLWRNCLPK 315
+K+ ++LV + E G ++ +G F R+F A +S AL +W +N + K
Sbjct: 241 SKSTSQLVSIELVENGDGSELLSSNGQNFKRSFSAVYRVDSSALRQWEKSYLKNAMEK 298
>AF077540-3|AAC26312.2| 421|Caenorhabditis elegans C-type lectin
protein 21 protein.
Length = 421
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 421 EDYLLGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWE 543
+D+ T+G SR ++K +R+ RK +CV+V+GD WE
Sbjct: 225 QDFGFSRWTDG-SRWSYEKFDRILKRKNGECVVVAGD--WE 262
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 539 GRNLINTSSTKHANFLTLSPVTALWLEINWKLISRVEKKQN*QQP 673
G ++N +T H N + V + + +W+LI R EK + +P
Sbjct: 411 GIKMLNNMTTNHTNLPKIDNVGSFNVNGHWRLIRRREKFERQTEP 455
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical
protein C38D4.3 protein.
Length = 1784
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 176 KMNMAFPKTWLWRAVPHS--YAPSGLDLM 256
KMN P W +PH Y P+ LDL+
Sbjct: 714 KMNRQAPNAQFWNDIPHDEWYPPTPLDLL 742
>AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical
protein Y105E8A.7b protein.
Length = 840
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 312 KKLQTHRQKCVDRMAKAKISVFGSHK*RNTFTRNIAG 422
++L+ + C D +S FGSH+ R FT +G
Sbjct: 560 EELRRKERYCADTFPGPSVSAFGSHEMRVVFTSGSSG 596
>AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical
protein Y105E8A.7a protein.
Length = 906
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 312 KKLQTHRQKCVDRMAKAKISVFGSHK*RNTFTRNIAG 422
++L+ + C D +S FGSH+ R FT +G
Sbjct: 560 EELRRKERYCADTFPGPSVSAFGSHEMRVVFTSGSSG 596
>Z99773-4|CAB16925.1| 342|Caenorhabditis elegans Hypothetical
protein F18H3.5a protein.
Length = 342
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 280 IRAMRTIRHQVEP*RRVGMWNRSPQPCLWEGHIHFAAVPR 161
I +++++ HQ++P R + N + C W+ H +PR
Sbjct: 100 IISLKSVFHQLDPVRAILKINMIMERCDWDLHTFLRNIPR 139
>Z99773-1|CAB16923.2| 406|Caenorhabditis elegans Hypothetical
protein F18H3.5b protein.
Length = 406
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 280 IRAMRTIRHQVEP*RRVGMWNRSPQPCLWEGHIHFAAVPR 161
I +++++ HQ++P R + N + C W+ H +PR
Sbjct: 164 IISLKSVFHQLDPVRAILKINMIMERCDWDLHTFLRNIPR 203
>Z50110-5|CAA90447.1| 342|Caenorhabditis elegans Hypothetical
protein F18H3.5a protein.
Length = 342
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 280 IRAMRTIRHQVEP*RRVGMWNRSPQPCLWEGHIHFAAVPR 161
I +++++ HQ++P R + N + C W+ H +PR
Sbjct: 100 IISLKSVFHQLDPVRAILKINMIMERCDWDLHTFLRNIPR 139
>U88184-12|AAM98020.1| 570|Caenorhabditis elegans Hypothetical
protein F36H5.2b protein.
Length = 570
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/63 (19%), Positives = 30/63 (47%)
Frame = +1
Query: 175 QNEYGLPKDMAVESGSTFLRAFRARPDDESYALHEWPAHLWRNCLPKNYKHIAKSVSTEW 354
+ + +P + ++ S FL ++ ++ H+ W N + N KH+ + +S ++
Sbjct: 69 EKRFNIPWRIELKRVSGFLEIHLHCGENATFDYHKIETDCWFNLVSTNGKHLMRQMSAKF 128
Query: 355 LRL 363
R+
Sbjct: 129 YRI 131
>AL132846-4|CAB60347.1| 328|Caenorhabditis elegans Hypothetical
protein Y43D4A.6 protein.
Length = 328
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 517 LVSGDLPWEKPDQHIFHEACKLLNVEPRNCIMVG 618
L++G+LPW++P + + + N +NCI G
Sbjct: 200 LLTGNLPWDEPKESDILYSQWMNNKTSKNCIWYG 233
>AF083878-1|AAD48898.1| 342|Caenorhabditis elegans cyclin-dependent
kinase CDK-4 protein.
Length = 342
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 280 IRAMRTIRHQVEP*RRVGMWNRSPQPCLWEGHIHFAAVPR 161
I +++++ HQ++P R + N + C W+ H +PR
Sbjct: 100 IISLKSVFHQLDPVRAILKINMIMERCDWDLHTFLRNIPR 139
>AF002198-7|AAF99935.1| 693|Caenorhabditis elegans Hypothetical
protein F35F10.10 protein.
Length = 693
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 539 GRNLINTSSTKHANFLTLSPVTALWLEINWKLISRVEKKQN*QQP 673
G ++N +T H N + + + +WKL+ R E+ +QP
Sbjct: 259 GIKMLNNMTTNHTNLPKIDDMGSFNASGHWKLLRRYEEFDTQRQP 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,481,926
Number of Sequences: 27780
Number of extensions: 355773
Number of successful extensions: 1104
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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