Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6j13
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97016-10|AAP68963.1| 181|Caenorhabditis elegans Hypothetical p... 35 0.044
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical pr... 29 2.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.9
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 2.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.9
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 2.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.9
AL110479-19|CAB54366.1| 222|Caenorhabditis elegans Hypothetical... 28 5.1
Z81492-3|CAB04030.1| 382|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF099918-3|AAN63401.1| 436|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81147-12|CAB03539.2| 494|Caenorhabditis elegans Hypothetical p... 27 8.9
AF022971-2|AAG23980.1| 327|Caenorhabditis elegans Seven tm rece... 27 8.9
>U97016-10|AAP68963.1| 181|Caenorhabditis elegans Hypothetical
protein B0261.8 protein.
Length = 181
Score = 35.1 bits (77), Expect = 0.044
Identities = 31/123 (25%), Positives = 59/123 (47%)
Frame = +3
Query: 27 KIDVENNEVPPPIVYEKQEVNENKLDWFNVTDDGAACMEDIQNEIANIDFKETKWNPDAP 206
+ID E E IV+E+ E ++N D ++ +NEI ++ K T+ + + P
Sbjct: 62 EIDEEEIEEQDEIVHEQSENDQNLKD-----------SDEKKNEIVALE-KSTEKDEELP 109
Query: 207 EFSLNEGTTIQASTQDGINDVFLSETDNTDTNKYITDIDKQNQAKYFYFYQAEDGQQVFL 386
+ E Q +D + ++F ET++ +TN+ +++ + F +AE+ VF
Sbjct: 110 ---IPEKEA-QVDQEDTLENLFEKETESNNTNEQQENVETNDTTSNFDLNEAEERVDVFS 165
Query: 387 NSL 395
N L
Sbjct: 166 NGL 168
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical protein
C05C10.2b protein.
Length = 1553
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +3
Query: 138 MEDIQNEIANIDFKETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDN---TDTNKY 308
++ IQN ++ +K T + P+ PE + EG + Q G + ++ N T N
Sbjct: 708 VKSIQNVEPDLIYKGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQ 767
Query: 309 ITDIDKQNQAKYFYFYQAEDGQQVFLNSLNVRILNESWGALAAAPTTITGR 461
+DID ++ + E ++ L+ + S +AA T GR
Sbjct: 768 ESDIDNEHYKIGINAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGR 818
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical protein
C05C10.2a protein.
Length = 1551
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Frame = +3
Query: 138 MEDIQNEIANIDFKETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDN---TDTNKY 308
++ IQN ++ +K T + P+ PE + EG + Q G + ++ N T N
Sbjct: 708 VKSIQNVEPDLIYKGTAFKPEKPELNFTEGFIKKKRHQIGSITLRIASYPNSFGTIYNFQ 767
Query: 309 ITDIDKQNQAKYFYFYQAEDGQQVFLNSLNVRILNESWGALAAAPTTITGR 461
+DID ++ + E ++ L+ + S +AA T GR
Sbjct: 768 ESDIDNEHYKIGINAFSEEKFTEISLDEREKIVETCSLMGFSAANTIFNGR 818
>Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical
protein F53B7.3 protein.
Length = 267
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 255 GINDVFLSETDNTDTNKYITDIDKQNQAKYFYFYQAEDGQQVFLNSL 395
G+ ++F T+ + ++ D+ + A YF + EDG+ + L L
Sbjct: 132 GVRELFEKSTEGEEQRRHRADLLRNIDAHYFGYLDDEDGRLIPLEKL 178
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 180 ETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDNTDTNKY 308
E KW D +++ I+ ++G + + + +T+N D KY
Sbjct: 3610 EVKWFKDGVPIAIDNQHVIEKKGENGSHTLVIKDTNNADFGKY 3652
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 180 ETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDNTDTNKY 308
E KW D +++ I+ ++G + + + +T+N D KY
Sbjct: 2970 EVKWFKDGVPIAIDNQHVIEKKGENGSHTLVIKDTNNADFGKY 3012
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 180 ETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDNTDTNKY 308
E KW D +++ I+ ++G + + + +T+N D KY
Sbjct: 3610 EVKWFKDGVPIAIDNQHVIEKKGENGSHTLVIKDTNNADFGKY 3652
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 180 ETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDNTDTNKY 308
E KW D +++ I+ ++G + + + +T+N D KY
Sbjct: 3610 EVKWFKDGVPIAIDNQHVIEKKGENGSHTLVIKDTNNADFGKY 3652
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 180 ETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDNTDTNKY 308
E KW D +++ I+ ++G + + + +T+N D KY
Sbjct: 2970 EVKWFKDGVPIAIDNQHVIEKKGENGSHTLVIKDTNNADFGKY 3012
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 180 ETKWNPDAPEFSLNEGTTIQASTQDGINDVFLSETDNTDTNKY 308
E KW D +++ I+ ++G + + + +T+N D KY
Sbjct: 3610 EVKWFKDGVPIAIDNQHVIEKKGENGSHTLVIKDTNNADFGKY 3652
>AL110479-19|CAB54366.1| 222|Caenorhabditis elegans Hypothetical
protein Y105C5B.20 protein.
Length = 222
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +3
Query: 222 EGTTIQASTQDGINDVFLSETDNTDTNKYITDIDKQNQAKYFYFYQAEDGQQVFLNSLNV 401
E T T++ D+F N + N+ + DID +N K + + ++ L L V
Sbjct: 159 EDTIENLHTRNNYEDIFDVLKSNLNKNEQLNDIDGRNNQKSDKMTEVDQTDKMHLTELEV 218
Query: 402 R 404
+
Sbjct: 219 K 219
>Z81492-3|CAB04030.1| 382|Caenorhabditis elegans Hypothetical
protein E03H4.6 protein.
Length = 382
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 276 SETDNTDTNKYITDIDKQNQAKY--FYFYQAEDGQQVFLNSLNVRILNE 416
S + N + K ++ I K + + +Y YQ G+ V +N+LN++ + E
Sbjct: 179 SMSPNKEAEKDVSKILKISHGRLLKYYIYQITQGKWVNMNTLNIKSVEE 227
>AF099918-3|AAN63401.1| 436|Caenorhabditis elegans Hypothetical
protein H05C05.2a protein.
Length = 436
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = +3
Query: 210 FSLNEGTTIQASTQDGINDVFLSETDNTDTNKYITDIDKQNQAKYFYFYQAEDGQQVFLN 389
FS E +Q + Q +N + + ++T +DI ++FY+A Q L
Sbjct: 173 FSSLEPAPVQ-NYQSELNKIVAMQNNSTSQPMETSDISSPQYDSLYHFYRANSTQNDLLT 231
Query: 390 SLNVRILN 413
+ +LN
Sbjct: 232 AAAAEVLN 239
>Z81147-12|CAB03539.2| 494|Caenorhabditis elegans Hypothetical
protein T09E11.6 protein.
Length = 494
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +3
Query: 36 VENNEVPPPIVYEKQEVNENKLDWFNVTDDGAACMEDIQNEIANIDFKETKWNPDAPEFS 215
++N+++ VYE +++ E W +D + +EI +D K+ KW+P + +
Sbjct: 248 LQNHDLIMKSVYEMEQIFE----WLGGANDIF-----VTHEIGRVDVKKLKWDPMSLKLF 298
Query: 216 LNE 224
+NE
Sbjct: 299 INE 301
>AF022971-2|AAG23980.1| 327|Caenorhabditis elegans Seven tm
receptor protein 46 protein.
Length = 327
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 74 FIHNRRRDFIIFNINFQHLIFL 9
F HN R F+ F++N Q+ +FL
Sbjct: 65 FAHNYNRAFVFFSLNTQNSLFL 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,649,142
Number of Sequences: 27780
Number of extensions: 323391
Number of successful extensions: 1062
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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