Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6j13
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              25   0.64 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   4.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   7.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.8  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +3

Query: 30  IDVENNEVPPPIVYEKQEVNENKLDWFNVTDDGAACMEDIQNEIANIDFKETKWN 194
           IDVEN +V        Q  +E  +  FN  DDG    E +  EIA I   E + N
Sbjct: 52  IDVENEKV--------QLFSECLIKKFNAYDDGGNFNEVVVREIAEIYLDENEVN 98


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/33 (21%), Positives = 16/33 (48%)
 Frame = -3

Query: 167 ICYFILNIFHTSSSIVSNIKPIKFVFINLLLFI 69
           +CYF  ++ H    +   +  + F+   LL+ +
Sbjct: 163 VCYFTAHVTHPRHRLCVFVAGVVFIVSGLLMLV 195


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 430 LLLHLQPSLEGFYTVRHCP 486
           LLLHL P    FY++   P
Sbjct: 887 LLLHLTPLQPRFYSISSSP 905


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 194 VPFGFFEINICYFILNIFHTSSSIVSNIKPIKFVFINLLLFIHN 63
           +  G   I  C + LNIF  +S  +     ++   IN+  FI N
Sbjct: 149 IGIGNTTIQACPYTLNIFDLTSDKLLRQYRLRAEDINMNTFIAN 192


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 524 RCIWHVFSC 498
           +C WH F+C
Sbjct: 604 QCCWHCFNC 612


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,668
Number of Sequences: 438
Number of extensions: 3758
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)