Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6i23
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070969-1|AAL48591.1|  233|Drosophila melanogaster RE06857p pro...   248   6e-66
AE014298-2476|AAF48662.2|  233|Drosophila melanogaster CG4742-PA...   248   6e-66
AE013599-317|AAM68910.1|  708|Drosophila melanogaster CG30384-PA...    33   0.49 
AF160929-1|AAD46869.1|  281|Drosophila melanogaster BcDNA.LD1215...    29   6.1  
AE014297-3187|AAN13913.2|  281|Drosophila melanogaster CG31289-P...    29   6.1  

>AY070969-1|AAL48591.1|  233|Drosophila melanogaster RE06857p
           protein.
          Length = 233

 Score =  248 bits (607), Expect = 6e-66
 Identities = 108/174 (62%), Positives = 138/174 (79%), Gaps = 1/174 (0%)
 Frame = +2

Query: 122 WTKAT-APKSFIQNNKKIYPPQQIDEPTRPAFVCHQKTNIKYSPDKLWYVACLIRGMTVD 298
           W K    P+ +++ NK ++PPQ+ DE  R A+VCH ++NIKYSPDK+WY+A  +RGM+VD
Sbjct: 60  WNKYNYGPRKWLEYNKTVHPPQETDEEPRNAYVCHMRSNIKYSPDKMWYIAAFVRGMSVD 119

Query: 299 EALKQLSFVNKKGALFVKEAVLEAQEMAIKDHNVEFKSNLWVAESFSGKGMVFKGIRRHA 478
           EALKQL+FV KKGA  VKE +LEAQ++A++ HNVE+KSNLW+AESF GKG VFKG+RRHA
Sbjct: 120 EALKQLNFVLKKGATDVKETILEAQQIAVERHNVEYKSNLWIAESFVGKGRVFKGVRRHA 179

Query: 479 RGRLGEVRYKYSHYFVRLEEGKPPTDYYKRKPLLPSNQLQDWLEQMRRRKITNS 640
           RGR G+V YK+ HYFVRLEEG+PP  YY ++P  P  Q + W+EQMR RKI NS
Sbjct: 180 RGRFGKVEYKHCHYFVRLEEGEPPQHYY-QEPQTPEQQYESWMEQMRSRKIINS 232


>AE014298-2476|AAF48662.2|  233|Drosophila melanogaster CG4742-PA
           protein.
          Length = 233

 Score =  248 bits (607), Expect = 6e-66
 Identities = 108/174 (62%), Positives = 138/174 (79%), Gaps = 1/174 (0%)
 Frame = +2

Query: 122 WTKAT-APKSFIQNNKKIYPPQQIDEPTRPAFVCHQKTNIKYSPDKLWYVACLIRGMTVD 298
           W K    P+ +++ NK ++PPQ+ DE  R A+VCH ++NIKYSPDK+WY+A  +RGM+VD
Sbjct: 60  WNKYNYGPRKWLEYNKTVHPPQETDEEPRNAYVCHMRSNIKYSPDKMWYIAAFVRGMSVD 119

Query: 299 EALKQLSFVNKKGALFVKEAVLEAQEMAIKDHNVEFKSNLWVAESFSGKGMVFKGIRRHA 478
           EALKQL+FV KKGA  VKE +LEAQ++A++ HNVE+KSNLW+AESF GKG VFKG+RRHA
Sbjct: 120 EALKQLNFVLKKGATDVKETILEAQQIAVERHNVEYKSNLWIAESFVGKGRVFKGVRRHA 179

Query: 479 RGRLGEVRYKYSHYFVRLEEGKPPTDYYKRKPLLPSNQLQDWLEQMRRRKITNS 640
           RGR G+V YK+ HYFVRLEEG+PP  YY ++P  P  Q + W+EQMR RKI NS
Sbjct: 180 RGRFGKVEYKHCHYFVRLEEGEPPQHYY-QEPQTPEQQYESWMEQMRSRKIINS 232


>AE013599-317|AAM68910.1|  708|Drosophila melanogaster CG30384-PA
           protein.
          Length = 708

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = +2

Query: 488 LGEVRYKYSHYFVRLEEGKPPTD--YYKRKPLLPSNQLQDWLEQMRRR 625
           L  +R + SH+ +R EEG+PP+D   Y  K     ++ + W++Q+RR+
Sbjct: 620 LSGLRLEISHFQLREEEGEPPSDGTDYNGK----ESEEKPWIQQLRRK 663


>AF160929-1|AAD46869.1|  281|Drosophila melanogaster BcDNA.LD12153
           protein.
          Length = 281

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 59  FVSNLKYNQCNNFHTNSLHLAWTKATAPKSFIQNNKKIYPPQ 184
           F   +K N+ +N HT  L     K   P+S ++  K+  PP+
Sbjct: 145 FYDKIKLNRLHNMHTLCLLDIKVKEPTPESLMRKRKEYMPPR 186


>AE014297-3187|AAN13913.2|  281|Drosophila melanogaster CG31289-PA
           protein.
          Length = 281

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 59  FVSNLKYNQCNNFHTNSLHLAWTKATAPKSFIQNNKKIYPPQ 184
           F   +K N+ +N HT  L     K   P+S ++  K+  PP+
Sbjct: 145 FYDKIKLNRLHNMHTLCLLDIKVKEPTPESLMRKRKEYMPPR 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,950,777
Number of Sequences: 53049
Number of extensions: 596430
Number of successful extensions: 1595
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)