Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6i14
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 31 0.72
AL110498-4|CAE18014.2| 336|Caenorhabditis elegans Hypothetical ... 29 2.2
AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical ... 29 2.2
Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein. 29 3.9
AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein. 29 3.9
AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein. 29 3.9
Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical p... 27 8.9
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 8.9
>U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical
protein F16H11.1 protein.
Length = 501
Score = 132 bits (320), Expect = 2e-31
Identities = 58/144 (40%), Positives = 95/144 (65%), Gaps = 9/144 (6%)
Frame = +1
Query: 235 SQNVLYGLGHVYNDLCAAMWFSYMLLFFQAVLDMRAVVAGAMLLLGQVVDALATPVVGVL 414
++ + +G+GH YNDLCA+MWF+Y +++ + VL ++ AG ++L+GQV DA++TP+VG+
Sbjct: 35 TKKIAFGIGHFYNDLCASMWFTYFMIYMEKVLKFQSSRAGMLMLIGQVTDAISTPLVGIF 94
Query: 415 A---------DKYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAV 567
+ DK G + +WHL G +LV+ +FP++F +C+ C + W L++
Sbjct: 95 SDSNILPACFDKIGRRMSWHLIGTVLVSLSFPMIFNKCFLC----KSTTSEWLKVLWFVP 150
Query: 568 LIIFFQIGWAVVQISHLAMIPSIT 639
I+ FQ GWA VQISHLA+IP ++
Sbjct: 151 FIMVFQFGWASVQISHLALIPELS 174
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 318 SSSPGHESCRSWSYAASRTSCRCTCNPCCGSFG 416
S P SC + ++ SCR TC P C S G
Sbjct: 19 SPLPSTSSCGCQASSSCANSCRSTCRPTCSSSG 51
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 237 SERALRTRACLQRPLRCDVVLIHAAFLSSSPGHESCRS-WSYAASRTSCRCTCNPCCGS 410
S + +++ Q PL+ + ++ S ++CRS S S+++C TC C S
Sbjct: 136 SASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCRSSCSNRVSQSTCDATCQNTCSS 194
>AL110498-4|CAE18014.2| 336|Caenorhabditis elegans Hypothetical
protein Y64G10A.8 protein.
Length = 336
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +1
Query: 355 AMLLLGQVVDALATPVVGVLADKYGTKKAWHLTGCILVTATFPLLFIRCWGCWFNENTQY 534
A+LL ++ L P++G L + + +HL IL+ +FI C F +
Sbjct: 22 ALLLSFLILSILILPLMGWLITRIAKNQLYHLNTRILLIIHCSGIFIHCADRLFLHTSDL 81
Query: 535 LYWWMPLY 558
W + +Y
Sbjct: 82 YNWHVAMY 89
>AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical
protein Y48G8AL.9 protein.
Length = 295
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -3
Query: 647 RLSVIDGIIARCEICTTAQPIWKNIIRTA*YSGIHQYKYCVFSLNQQPQHLMNSNGNVAV 468
+ S + I RCEIC P K YS H+ ++ Q +M+ + N+ +
Sbjct: 183 KTSGVSSFIRRCEICEIDLPT-KRASDAHFYSEDHETAQLMYPSKNTTQPMMSVDRNLGM 241
Query: 467 TKMHPV 450
MH +
Sbjct: 242 PNMHAI 247
>Z79639-6|CAB01919.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 537 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 403
Q++C F+KP TS E R R +P + V QN H
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 545
>Z79639-5|CAD42645.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 537 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 403
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>Z79598-9|CAB01869.3| 957|Caenorhabditis elegans Hypothetical
protein C44H4.7b protein.
Length = 957
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 537 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 403
Q++C F+KP TS E R R +P + V QN H
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 545
>Z79598-8|CAD42646.2| 972|Caenorhabditis elegans Hypothetical
protein C44H4.7a protein.
Length = 972
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 537 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 403
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>AF519110-1|AAM74224.1| 957|Caenorhabditis elegans EOR-2B protein.
Length = 957
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 537 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 403
Q++C F+KP TS E R R +P + V QN H
Sbjct: 501 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 545
>AF519109-1|AAM74223.1| 972|Caenorhabditis elegans EOR-2A protein.
Length = 972
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 537 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 403
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>AF502570-1|AAM74152.1| 972|Caenorhabditis elegans EOR-2 protein.
Length = 972
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 537 QILCVFIKPATPTSNEQQRECRCY*NASSQMPCLLSSVFISQNSH 403
Q++C F+KP TS E R R +P + V QN H
Sbjct: 516 QLVCAFLKPEQVTSTECVRNMRKVTREEPMLPKFIIRVEQVQNQH 560
>Z82051-2|CAB04816.1| 237|Caenorhabditis elegans Hypothetical
protein T23D5.3 protein.
Length = 237
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 419 SAKTPTTGVASASTTCPRSSIAPATTALMSRTA*KKSSMY 300
+A + TTG SA+TT + P TTA +S K + +Y
Sbjct: 124 TAGSATTGSPSAATTAATVAAPPTTTAAVSILTLKSAFLY 163
>Z66496-1|CAA91282.1| 404|Caenorhabditis elegans Hypothetical
protein E04D5.2 protein.
Length = 404
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +1
Query: 460 ILVTATFPLLFIRCWGCWFNENTQ--YLY--WWMPLYYAVLIIFFQIGWAVVQIS 612
+L+ T+ LLF G W+ +NT +LY + +P+++ ++ F I + ++ I+
Sbjct: 72 MLICLTYTLLFGVDAGIWYRKNTTLFFLYHRYIVPVFFIAKVVQFAIPFILILIT 126
>Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical
protein C36B1.6 protein.
Length = 175
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 448 LTGCILVTATFPLLFIRCWGCWFNENTQYLYWWMPLYYAVLIIFFQI 588
+ GC+LV +TF NE Q LYW ++ A IIF+ I
Sbjct: 99 ILGCVLVISTFSRN---------NECDQLLYWTSFIFCAFFIIFYSI 136
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 141 DSVGNTHPRPGPSDVVAGRFTCIVQEKMVACQSERALRTRACL 269
D +G+T P V GR+TCI + K A +SE+ + L
Sbjct: 2901 DIIGSTLVIDNPQKEVEGRYTCIAENK--AGRSEKDMMVEVLL 2941
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 141 DSVGNTHPRPGPSDVVAGRFTCIVQEKMVACQSERALRTRACL 269
D +G+T P V GR+TCI + K A +SE+ + L
Sbjct: 2901 DIIGSTLVIDNPQKEVEGRYTCIAENK--AGRSEKDMMVEVLL 2941
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 141 DSVGNTHPRPGPSDVVAGRFTCIVQEKMVACQSERALRTRACL 269
D +G+T P V GR+TCI + K A +SE+ + L
Sbjct: 2901 DIIGSTLVIDNPQKEVEGRYTCIAENK--AGRSEKDMMVEVLL 2941
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 141 DSVGNTHPRPGPSDVVAGRFTCIVQEKMVACQSERALRTRACL 269
D +G+T P V GR+TCI + K A +SE+ + L
Sbjct: 2901 DIIGSTLVIDNPQKEVEGRYTCIAENK--AGRSEKDMMVEVLL 2941
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 141 DSVGNTHPRPGPSDVVAGRFTCIVQEKMVACQSERALRTRACL 269
D +G+T P V GR+TCI + K A +SE+ + L
Sbjct: 2901 DIIGSTLVIDNPQKEVEGRYTCIAENK--AGRSEKDMMVEVLL 2941
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,466,964
Number of Sequences: 27780
Number of extensions: 374780
Number of successful extensions: 1046
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -