Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6i14
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.4  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   4.5  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   4.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.9  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 214  KRRWWRVSQNVLYGLGHVYNDLCAAMWF 297
            ++ W +VS NV  G   V  DL  A W+
Sbjct: 1503 QQEWNQVSNNVKPGGNFVVLDLVPATWY 1530


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 579 FPNWLGRGTNLTSGYDSVNHRQ 644
           F  WLG G  +++G    NHR+
Sbjct: 118 FKPWLGDGLLISTGQKWRNHRK 139


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -2

Query: 156 YCRQNQFIYPSHVVIGHCH 100
           YC +  ++   H+ + HC+
Sbjct: 92  YCCRESYLKERHITLHHCY 110


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = -2

Query: 156 YCRQNQFIYPSHVVIGHCH 100
           YC +  ++   H+ + HC+
Sbjct: 92  YCCRESYLKERHITLHHCY 110


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 370 GQVVDALATPVVGVLADKYG 429
           G+V   L TP VGV A   G
Sbjct: 579 GEVTTPLFTPAVGVAAASAG 598


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,473
Number of Sequences: 438
Number of extensions: 4304
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)