Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6i11
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 75 6e-14
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 75 6e-14
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 62 3e-10
AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical ... 62 4e-10
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 56 2e-08
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 56 2e-08
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 56 2e-08
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U42848-1|AAA83606.2| 345|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81058-2|CAB62799.1| 103|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81540-8|CAB04407.2| 326|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 74.5 bits (175), Expect = 6e-14
Identities = 46/170 (27%), Positives = 85/170 (50%)
Frame = +2
Query: 116 KQLKTKVKRDGDFIPPDGGWGWMVVIAAGLSNLSALPIFQQFGLLFRDKFARLGXXXXXX 295
+ + +V+ G PPDGG+GW+VV A+ L N++ + G + +A
Sbjct: 25 ENFEEQVEEVGKVTPPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWA-------DQ 77
Query: 296 XXXXNIHSALNSCVGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVT 475
++ A+ S + L G F R V++ G+IL +A +L+ FA++
Sbjct: 78 FGSTSVAGAVISILTGCYYLAGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWE 137
Query: 476 YIITFSLLYGAGYGITSASNALALNTYWKERRRLATGLSWTATGLGPMVW 625
+ F +L G G+G + + L+TY+ ++R +ATG++ +G+G MV+
Sbjct: 138 LYLLFGVLGGIGFGCMYLPSIVILSTYFAKKRSVATGIAVCGSGIGTMVF 187
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 74.5 bits (175), Expect = 6e-14
Identities = 46/170 (27%), Positives = 85/170 (50%)
Frame = +2
Query: 116 KQLKTKVKRDGDFIPPDGGWGWMVVIAAGLSNLSALPIFQQFGLLFRDKFARLGXXXXXX 295
+ + +V+ G PPDGG+GW+VV A+ L N++ + G + +A
Sbjct: 25 ENFEEQVEEVGKVTPPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWA-------DQ 77
Query: 296 XXXXNIHSALNSCVGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVT 475
++ A+ S + L G F R V++ G+IL +A +L+ FA++
Sbjct: 78 FGSTSVAGAVISILTGCYYLAGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWE 137
Query: 476 YIITFSLLYGAGYGITSASNALALNTYWKERRRLATGLSWTATGLGPMVW 625
+ F +L G G+G + + L+TY+ ++R +ATG++ +G+G MV+
Sbjct: 138 LYLLFGVLGGIGFGCMYLPSIVILSTYFAKKRSVATGIAVCGSGIGTMVF 187
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 64.9 bits (151), Expect = 5e-11
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Frame = +2
Query: 131 KVKRDGDFI-PPDGGWGWMVVIAAGLSNLSALPIFQQFGLLFRDKFARLGXXXXXXXXXX 307
K D FI PPDGG+GW +V A+ L N+ + G + + +
Sbjct: 23 KELEDAGFIAPPDGGYGWAIVAASFLLNMIVDGVIFTVGKILQPAWVH--SFGISEASAA 80
Query: 308 NIHSALNSCVGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYIIT 487
S L+ C G + F RQV++ G+++ +L++ A + ++
Sbjct: 81 MTMSILSGCY----FFAGPIASVLCNVFGCRQVALAGSLIAALGFLLSISAPNIYVLYVS 136
Query: 488 FSLLYGAGYGITSASNALALNTYWKERRRLATGLSWTATGLGPMVW 625
F L+ GAG+G+ + ++ Y+ ++R +ATG++ +G+G V+
Sbjct: 137 FGLIAGAGFGMMYLPAIVIISQYFAKKRSVATGIAVCGSGIGTTVF 182
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 62.1 bits (144), Expect = 3e-10
Identities = 38/157 (24%), Positives = 71/157 (45%)
Frame = +2
Query: 155 IPPDGGWGWMVVIAAGLSNLSALPIFQQFGLLFRDKFARLGXXXXXXXXXXNIHSALNSC 334
+PPDGGWGW+VVI + ++ A FG+L ++ +
Sbjct: 13 LPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTGFT-- 70
Query: 335 VGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYIITFSLLYGAGY 514
+GA G V + R ++ GA + +L+ FA ++I+ ++ G G+
Sbjct: 71 LGA-----GPLASAVCNKYGCRITTIIGAGVAFVGCLLSCFATEIWHFVISVGVIMGIGF 125
Query: 515 GITSASNALALNTYWKERRRLATGLSWTATGLGPMVW 625
G+ + + Y++ +R LATG++ G+G +V+
Sbjct: 126 GLVYCPAIVIVTMYFESKRSLATGIAVAGAGVGAVVF 162
>AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical
protein C10E2.6 protein.
Length = 594
Score = 61.7 bits (143), Expect = 4e-10
Identities = 38/157 (24%), Positives = 72/157 (45%)
Frame = +2
Query: 155 IPPDGGWGWMVVIAAGLSNLSALPIFQQFGLLFRDKFARLGXXXXXXXXXXNIHSALNSC 334
+PPDGGWGW+VV+ + ++ A FG+L ++ + L
Sbjct: 16 LPPDGGWGWVVVLGSFFVHVFADGFVYSFGVLVETLMEEFHASNTMAALIISLLTGLT-- 73
Query: 335 VGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYIITFSLLYGAGY 514
+G+ G V + R ++TGA + L+ FA + +IT ++ G G+
Sbjct: 74 LGS-----GPLASAVCNKYGCRITTITGAGVAFVGCALSYFATAMWHIVITVGVIMGTGF 128
Query: 515 GITSASNALALNTYWKERRRLATGLSWTATGLGPMVW 625
G+ + + Y++ +R LATG++ G+G +++
Sbjct: 129 GLMYCPAIVIVTMYFENKRSLATGIAVAGAGVGTVLF 165
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Frame = +2
Query: 161 PDGGWGWMVVIAAGLSNLSALPI---FQQFGLLFRDKFARLGXXXXXXXXXXNIHSALNS 331
PDGG+GW++V AA +SNL I F +F +++++ + + S
Sbjct: 70 PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQE----------SDGLTVFIGS 119
Query: 332 CVGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYIITFSLLYGAG 511
+ +L G + + R V M G ++ A M+ + + +++ + ++ G G
Sbjct: 120 LIIGTYLLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLG 179
Query: 512 YGITSASNALALNTYWKERRRLATGLSWTATGLGPMVWPYV 634
+G+ + + Y+ +R +ATG+S +G+G + P +
Sbjct: 180 FGMIYLPAIVVVGFYFDSKRAMATGISVAGSGVGTFLVPLI 220
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Frame = +2
Query: 161 PDGGWGWMVVIAAGLSNLSALPI---FQQFGLLFRDKFARLGXXXXXXXXXXNIHSALNS 331
PDGG+GW++V AA +SNL I F +F +++++ + + S
Sbjct: 15 PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQE----------SDGLTVFIGS 64
Query: 332 CVGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYIITFSLLYGAG 511
+ +L G + + R V M G ++ A M+ + + +++ + ++ G G
Sbjct: 65 LIIGTYLLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLG 124
Query: 512 YGITSASNALALNTYWKERRRLATGLSWTATGLGPMVWPYV 634
+G+ + + Y+ +R +ATG+S +G+G + P +
Sbjct: 125 FGMIYLPAIVVVGFYFDSKRAMATGISVAGSGVGTFLVPLI 165
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Frame = +2
Query: 161 PDGGWGWMVVIAAGLSNLSALPI---FQQFGLLFRDKFARLGXXXXXXXXXXNIHSALNS 331
PDGG+GW++V AA +SNL I F +F +++++ + + S
Sbjct: 70 PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQE----------SDGLTVFIGS 119
Query: 332 CVGA*RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYIITFSLLYGAG 511
+ +L G + + R V M G ++ A M+ + + +++ + ++ G G
Sbjct: 120 LIIGTYLLVGPLVSALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLG 179
Query: 512 YGITSASNALALNTYWKERRRLATGLSWTATGLGPMVWPYV 634
+G+ + + Y+ +R +ATG+S +G+G + P +
Sbjct: 180 FGMIYLPAIVVVGFYFDSKRAMATGISVAGSGVGTFLVPLI 220
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/158 (22%), Positives = 75/158 (47%)
Frame = +2
Query: 164 DGGWGWMVVIAAGLSNLSALPIFQQFGLLFRDKFARLGXXXXXXXXXXNIHSALNSCVGA 343
DGG+GW+VV+A+ L + FG++F ++ I +++ +
Sbjct: 68 DGGYGWLVVLASFLMHAVCDGASFCFGIVF----VKIQEHFQCGRFVSMITASMFLSLPL 123
Query: 344 *RVLHGLANGPVFRTFTYRQVSMTGAILVVSALMLTVFANSFVTYIITFSLLYGAGYGIT 523
++ +A G V R + GA + + ++ +F + ++I+F L G G
Sbjct: 124 --IMSPVA-GIVSDILGCRMSIIIGASICTVSCIIAMFCSHIFFFMISFGLGCGVGMSFI 180
Query: 524 SASNALALNTYWKERRRLATGLSWTATGLGPMVWPYVI 637
+ + + Y+++RR LAT + + TG+G +++P ++
Sbjct: 181 YNAAIVIVTYYFEKRRGLATSFAVSGTGVGTVIYPILL 218
>U42848-1|AAA83606.2| 345|Caenorhabditis elegans Hypothetical
protein C31H1.2 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 202 AGSYDNHPTPTTIGRYKITISFHFSFQLLRLCHSA 98
A SYD+H P IG+Y+ F FQL + C A
Sbjct: 150 AASYDSHRVPRWIGKYEYDRP-QFQFQLEKSCFMA 183
>Z81058-2|CAB62799.1| 103|Caenorhabditis elegans Hypothetical
protein F11E6.2 protein.
Length = 103
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 262 VCKTRHFQFADHNNHQY 312
+C R+FQF D NH+Y
Sbjct: 72 ICTDRNFQFPDFTNHRY 88
>AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical
protein F42G8.9 protein.
Length = 386
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 306 MIVVVCELEMPSLANLSRNRSPNCWNMGK 220
+IV+V ++ SLAN++ CW GK
Sbjct: 9 LIVLVYSIKAQSLANVTEMSRKKCWEAGK 37
>Z81540-8|CAB04407.2| 326|Caenorhabditis elegans Hypothetical
protein F46B3.11 protein.
Length = 326
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 150 ILYLPMVVGVGWLS*LPACQTCQPCPY 230
+LY+P+++ V S LP+ Q C P Y
Sbjct: 200 LLYIPIMISVRKSSHLPSAQQCSPEKY 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,472,804
Number of Sequences: 27780
Number of extensions: 328856
Number of successful extensions: 767
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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