Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6h23
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein. 101 3e-22
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 33 0.17
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 31 0.53
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 31 0.93
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 31 0.93
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 31 0.93
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 30 1.2
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 30 1.2
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 30 1.2
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 30 1.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 2.1
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 29 2.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 2.1
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 29 2.8
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 2.8
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 29 2.8
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 29 2.8
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 3.8
U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical p... 29 3.8
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 28 5.0
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 28 5.0
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 5.0
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 6.6
Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical pr... 28 6.6
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 28 6.6
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 6.6
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 6.6
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 6.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 6.6
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 28 6.6
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 27 8.7
L16559-8|AAA27929.2| 643|Caenorhabditis elegans Hypothetical pr... 27 8.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 8.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.7
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 27 8.7
AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical ... 27 8.7
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 27 8.7
>Z81546-7|CAB04452.1| 320|Caenorhabditis elegans Hypothetical
protein F53A2.4 protein.
Length = 320
Score = 101 bits (243), Expect = 3e-22
Identities = 59/165 (35%), Positives = 87/165 (52%)
Frame = +1
Query: 151 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKAC 330
ERFDS+LL+MAQQ GGV ++L+ + FLSRKTDF++G + ++ + F H KA
Sbjct: 5 ERFDSVLLSMAQQLSGGVPEMLDVLFEFLSRKTDFYSGAGVDQARTLLLEKFDKHGGKAM 64
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXX 510
EA KK KEE +++L E ++ ++ + +F A V E+TD+
Sbjct: 65 KEAEEAKKRKEEQERKLAE-RRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKEQAKNSVEN 123
Query: 511 XXXVGSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKW 645
D+ T ED+D K +KPN+GNG DL Y+W
Sbjct: 124 LEKF--VDNEGETSKDAEVEDEDSK---LMKPNSGNGADLAKYQW 163
>AF164431-1|AAF82633.1| 320|Caenorhabditis elegans NUD-1 protein.
Length = 320
Score = 101 bits (243), Expect = 3e-22
Identities = 59/165 (35%), Positives = 87/165 (52%)
Frame = +1
Query: 151 ERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVVKDTFYTHAKKAC 330
ERFDS+LL+MAQQ GGV ++L+ + FLSRKTDF++G + ++ + F H KA
Sbjct: 5 ERFDSVLLSMAQQLSGGVPEMLDVLFEFLSRKTDFYSGAGVDQARTLLLEKFDKHGGKAM 64
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXX 510
EA KK KEE +++L E ++ ++ + +F A V E+TD+
Sbjct: 65 KEAEEAKKRKEEQERKLAE-RRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKEQAKNSVEN 123
Query: 511 XXXVGSGDSSDVTEPATPEEDDDPKEKGKLKPNAGNGCDLEHYKW 645
D+ T ED+D K +KPN+GNG DL Y+W
Sbjct: 124 LEKF--VDNEGETSKDAEVEDEDSK---LMKPNSGNGADLAKYQW 163
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 319 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATV 444
K+ D+ +IKKE EEA+K+ KE ++++ +E N E ++
Sbjct: 266 KERIDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREEQLSI 307
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 319 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLAN 423
KK +EA KK+KEE +KR KE+++ +E++ N
Sbjct: 276 KKEVEEAE--KKKKEEKEKRRKEVKKNREEQLSIN 308
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +1
Query: 115 RLNTKVNMANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTGGREGEWEQVV 294
+LN K+N+ P ++ + H G + L N+ + S + F EG W +
Sbjct: 371 KLNPKLNLLICPNIIQKLITGSLEAHTNGFRFLFNSFSRYTSLRAFF----EEGGWSFLN 426
Query: 295 KDTFYTHAKKACDEANRIKKEKEEA 369
++ A D+++ E+E+A
Sbjct: 427 AESDNEEAMDDSDDSDAYDPEEEDA 451
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1721 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1780
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 1781 RREKQRKEEER 1791
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2012 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2071
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 2072 RREKQRKEEER 2082
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2027 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2086
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 2087 RREKQRKEEER 2097
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1831 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1890
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 1891 RREKQRKEEER 1901
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1721 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1780
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 1781 RREKQRKEEER 1791
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2012 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2071
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 2072 RREKQRKEEER 2082
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 2027 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 2086
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 2087 RREKQRKEEER 2097
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 217 NTIVSFLSRKTDFFTGGREGEWEQVVKDTF--YTHAKKACDEANRIKKEKEEADKRLKEI 390
N L K FF +E E Q+++ T K E R+K+ EE +++++E
Sbjct: 1831 NMTPEMLQLKAAFFAQQQENEANQMMQAKMKQQTINKDRIKEQERVKRMYEENERKVEED 1890
Query: 391 Q---QRKEQER 414
+ QRKE+ER
Sbjct: 1891 RREKQRKEEER 1901
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLAND 426
DE + +KEKE K +E ++RKE++RL +
Sbjct: 151 DEEEQKRKEKERRKKEKREKKERKEKKRLEKE 182
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 432
D A R K+E+EE +K+ EIQ +E+E+ ++E
Sbjct: 760 DPATR-KREREEREKKEAEIQAAEEEEKQRKEYE 792
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 432
D A R K+E+EE +K+ EIQ +E+E+ ++E
Sbjct: 760 DPATR-KREREEREKKEAEIQAAEEEEKQRKEYE 792
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 432
D A R K+E+EE +K+ EIQ +E+E+ ++E
Sbjct: 760 DPATR-KREREEREKKEAEIQAAEEEEKQRKEYE 792
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLAND 426
DE + +KEKE K +E ++RKE++RL +
Sbjct: 151 DEEEQKRKEKERRKKEKREKKKRKEKKRLEKE 182
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTEL 453
E R++ EK++ ++R++E++ Q ND +TEL
Sbjct: 1089 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITEL 1128
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTEL 453
E R++ EK++ ++R++E++ Q ND +TEL
Sbjct: 1162 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITEL 1201
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTEL 453
E R++ EK++ ++R++E++ Q ND +TEL
Sbjct: 1162 ELERLENEKDDLERRIRELEDELSQIGRGNDKTENDITEL 1201
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTD 459
+E R K+E+EEA+K+ K ++ +E ND P T + + D
Sbjct: 481 EEEERRKREEEEAEKQRK--REEREVRFSKNDISPTTSSGVAD 521
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +1
Query: 352 KEKEEADKRLKEIQQRKEQER 414
K+KEEAD++ KE ++R+++ER
Sbjct: 332 KQKEEADRKAKEEREREKKER 352
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTD 459
+E R K+E+EEA+K+ K ++ +E ND P T + + D
Sbjct: 481 EEEERRKREEEEAEKQRK--REEREVRFSKNDISPTTSSGVAD 521
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 307 YTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 462
Y +AKKA + +KEK+E D++ + +Q E E AN + T +L DQ
Sbjct: 78 YENAKKASELERLREKEKKEWDEKERRMQMEAENE--ANQHKTQT-EKLKDQ 126
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 307 YTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 462
Y +AKKA + +KEK+E D++ + +Q E E AN + T +L DQ
Sbjct: 923 YENAKKASELERLREKEKKEWDEKERRMQMEAENE--ANQHKTQT-EKLKDQ 971
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 283 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 414
E+VVK +K D+ +K+KE+ ++ KE ++ KE+ER
Sbjct: 356 EKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKER 399
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 319 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 420
K D R+K+EK+ +R KE ++RK +E+ A
Sbjct: 409 KAVADFKQRVKEEKDAEKERAKEEKKRKMREKTA 442
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +1
Query: 283 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER-----LANDFEPATVT 447
+Q++ ++ + K+ + A +KK+ EEA ++ +++ E ER L +D E + ++
Sbjct: 234 KQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESD-ESSAIS 292
Query: 448 ELTDQ 462
E+T Q
Sbjct: 293 EITKQ 297
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +1
Query: 283 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER-----LANDFEPATVT 447
+Q++ ++ + K+ + A +KK+ EEA ++ +++ E ER L +D E + ++
Sbjct: 234 KQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESD-ESSAIS 292
Query: 448 ELTDQ 462
E+T Q
Sbjct: 293 EITKQ 297
>U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical
protein C28C12.1 protein.
Length = 200
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = +1
Query: 538 SDVTEPATPEEDDDPKEKGKLKPNAGNG 621
SDV E ATP EDD EK K K NG
Sbjct: 135 SDVKESATPGEDD---EKEKTKTEGANG 159
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +1
Query: 349 KKEKEEADKRLKEIQQRKEQERLANDF 429
K EKEEADK +KEIQ KEQ F
Sbjct: 230 KCEKEEADKHVKEIQ--KEQMNSTKKF 254
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 313 HAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 414
H K D +R ++++ E D+R + +Q+KE+ER
Sbjct: 130 HKKHKKDREHRDREKERERDERKERERQQKEKER 163
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQER 414
DE +R ++K+E ++LKE+++R+E+ R
Sbjct: 206 DEKHRKDRKKKEKKQKLKEMEKRREKLR 233
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 349 KKEKEEADKRLKEIQQRKEQERLAND 426
KKEKE DK+L+E ++++E+ + A +
Sbjct: 134 KKEKERLDKKLEEDKKKEEKRKEAEE 159
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 241 RKTDFFTGGREGEWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 420
RKT F ++ + E+ D +K E + +E+ + DKR E +++K++ER
Sbjct: 1024 RKTQDFQDQQDADIERAEADE---QRRKMNVERAKKDEERAKKDKRDAEERRKKDEERAK 1080
Query: 421 NDFEPA 438
D E A
Sbjct: 1081 KDKEDA 1086
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 462
E R+K+E+EE KRL +Q +E E+L + E +L ++
Sbjct: 1210 EQERLKREEEEERKRL---EQLREAEKLKAEIEKENERKLQEE 1249
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 462
E R+K+E+EE KRL +Q +E E+L + E +L ++
Sbjct: 1210 EQERLKREEEEERKRL---EQLREAEKLKAEIEKENERKLQEE 1249
>Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical
protein T19C4.4 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 318 SMGVESIFDYLLPFPFTATSEKV 250
+M ++ +FDYL+PF T T V
Sbjct: 170 AMPIDKVFDYLIPFMITTTCVSV 192
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 298 DTFYTHAKKACDEANRIKKEKEEADKRLKEIQ-QRKEQERLANDFEPATV 444
+T T + + + R+K + E+ADK+ +E + Q +E E LA+ + A +
Sbjct: 655 ETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQI 704
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 298 DTFYTHAKKACDEANRIKKEKEEADKRLKEIQ-QRKEQERLANDFEPATV 444
+T T + + + R+K + E+ADK+ +E + Q +E E LA+ + A +
Sbjct: 655 ETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQI 704
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 316 AKKACDEANRIKKEKEEADKRLKEIQQRKEQ--ERLANDFEPATVTELTD 459
+ K D KK+KE++ K KE + +KE+ + + + EP V E D
Sbjct: 8 SSKEKDSKKEKKKDKEKSSKEKKEKKDKKEKKSKTIKPEPEPEPVNEYED 57
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 462
E R+K+E+EE KRL +Q +E E+L + E +L ++
Sbjct: 1210 EQERLKREEEEERKRL---EQLREAEKLKAEIEKENERKLQEE 1249
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 322 KACDEANRIKKEKEEADKRLKEIQ-QRKEQERLANDFE 432
+ACD +++K + +ADK+L ++ Q E +A+++E
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYE 130
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +1
Query: 331 DEANRIKKEKEEADKRLKEIQQRKEQER 414
+E + KKEKEE ++R KE +++ ++E+
Sbjct: 120 EEEMKKKKEKEEEERRAKEERKKAKKEK 147
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 319 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLA 420
+K DEA + KKEKEE KR + + E+ L+
Sbjct: 406 RKKKDEAEKAKKEKEEKRKRDEANDKTNEKSALS 439
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 27.5 bits (58), Expect = 8.7
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +1
Query: 103 PVTYRLNTKVNMANDPERFDSMLLAMAQQHEGGVKDLLNTIVSFLSRKTDFFTG-GREGE 279
P+ +LN K NM + + D + H+ KD ++ + ++ E
Sbjct: 1207 PIKLKLNVKFNMPS--QETDGSKKDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKE 1264
Query: 280 WEQVVKDTFYTHAKKACDEANRIKKEKEEA--DKRLKEIQQR----KEQERLAND 426
++ ++ ++A EA R+K++KEE D +L+E R KEQ+RL +
Sbjct: 1265 HKKKSREDETEEERRARKEAKRLKRQKEEQEDDAKLQEKLARKAAKKEQKRLEKE 1319
>L16559-8|AAA27929.2| 643|Caenorhabditis elegans Hypothetical
protein C06E1.9 protein.
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 193 EGGVKDLLNTIVSFLSRKTDFF 258
EGG+ ++ N++V+ L RK+D F
Sbjct: 37 EGGLMEIFNSVVASLPRKSDSF 58
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/86 (22%), Positives = 34/86 (39%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXXX 513
EA+ +KK+KE +K E ++ E+L + E A ++ T +
Sbjct: 9681 EADAVKKQKELDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQ 9740
Query: 514 XXVGSGDSSDVTEPATPEEDDDPKEK 591
+ D S + D+ PK+K
Sbjct: 9741 TGLEKDDKSTKDSESKETVDEKPKKK 9766
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/86 (22%), Positives = 34/86 (39%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXXX 513
EA+ +KK+KE +K E ++ E+L + E A ++ T +
Sbjct: 9701 EADAVKKQKELDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQ 9760
Query: 514 XXVGSGDSSDVTEPATPEEDDDPKEK 591
+ D S + D+ PK+K
Sbjct: 9761 TGLEKDDKSTKDSESKETVDEKPKKK 9786
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/86 (22%), Positives = 34/86 (39%)
Frame = +1
Query: 334 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQXXXXXXXXXXXXXXXXX 513
EA+ +KK+KE +K E ++ E+L + E A ++ T +
Sbjct: 9701 EADAVKKQKELDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAKLDAQTKEKTAEKQ 9760
Query: 514 XXVGSGDSSDVTEPATPEEDDDPKEK 591
+ D S + D+ PK+K
Sbjct: 9761 TGLEKDDKSTKDSESKETVDEKPKKK 9786
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/44 (27%), Positives = 29/44 (65%)
Frame = +1
Query: 283 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 414
E +K T AKK+ ++ KKE+++++K++KE+ ++ ++ +
Sbjct: 357 EVKIKSAPKTSAKKSAKKS--AKKEQKKSEKKVKEVPEKAQKSK 398
>AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical
protein F57H12.5 protein.
Length = 543
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 349 KKEKEEADKRLKEIQQRKEQERLANDFE 432
KKEKE+ D+ +E Q+ +++ER N E
Sbjct: 122 KKEKEKKDEEKRERQEDRKEERKENKRE 149
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +1
Query: 271 EGEWEQVVKDTFYTHAKKACDEANRIKKEK 360
+G+WE+ ++D + + C E + +EK
Sbjct: 1028 DGDWEKSIRDAYGAYVPLQCTEYGSVDREK 1057
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 322 KACDEANRIKKEKE--EADKRLKEIQQRKEQE 411
K ++A + KKE+E E + ++KE ++++EQE
Sbjct: 134 KIIEDAEKRKKEQEKREIENKIKEARKKREQE 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,606,506
Number of Sequences: 27780
Number of extensions: 195764
Number of successful extensions: 1305
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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