Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6h18
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 100 2e-22
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 94 1e-20
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.11
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 30 0.35
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 0.81
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 27 3.3
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 27 3.3
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 4.3
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 26 4.3
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 26 5.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.7
SPBC25H2.02 |ths1||threonine-tRNA ligase Ths1 |Schizosaccharomyc... 26 5.7
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 26 5.7
SPCC18.16c |fmn1||riboflavin kinase Fmn1|Schizosaccharomyces pom... 25 9.9
SPCC1393.09c |||RWD domain|Schizosaccharomyces pombe|chr 3|||Manual 25 9.9
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 100 bits (239), Expect = 2e-22
Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Frame = +2
Query: 155 GSQHVRYQ--RAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGF 328
GSQ V + VA C+ +G IL+ G+AVDAAIA+ C G + G+GGG
Sbjct: 89 GSQRVVVEGKNGVVATEEETCSQIGVGILKAGGNAVDAAIASGICIGAVNSFSSGIGGGG 148
Query: 329 LATVYDASTGRVRVLNARERAPAAMTLNMYENAS--STVGGLAIAVPGELRGYGALYQEY 502
+ + G LN RE APA + NM+ S S VGGL++AVPGE+ GY ++ Y
Sbjct: 149 FMLIRHPN-GTAHSLNFRETAPAGASKNMFHGNSTLSQVGGLSVAVPGEIAGYERAWKMY 207
Query: 503 GRLPWRELVQPTAELCRRG 559
G LPW +L +PT L R G
Sbjct: 208 GSLPWHKLFEPTIRLMRDG 226
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 94.3 bits (224), Expect = 1e-20
Identities = 58/152 (38%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Frame = +2
Query: 149 WTGSQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGG- 325
+TG + VR +R AVA+ C+ +G +L G+AVDAAIA+ FC G+ G+GGG
Sbjct: 72 FTGHK-VRGRRGAVASEVPVCSDIGVSMLADGGNAVDAAIASTFCIGVVNFFSSGIGGGG 130
Query: 326 FLATVYDASTGRVRVLNARERAPAAMTLNMYENAS--STVGGLAIAVPGELRGYGALYQE 499
F+ + T + L RE AP ++ +M++ + VG L+IA+PGEL G ++
Sbjct: 131 FMLIKHPNETAQS--LTFREIAPGNVSKHMFDKNPMLAQVGPLSIAIPGELAGLYEAWKS 188
Query: 500 YGRLPWRELVQPTAELCRRGHRVTEYMGRVLQ 595
+G L W +L++P +L R G VT M RVL+
Sbjct: 189 HGLLDWSKLLEPNVKLAREGFPVTRAMERVLK 220
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.5 bits (68), Expect = 0.11
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Frame = -1
Query: 591 NTLPMYSVTRCPRRHNSAVGCTSSRHGKRPYSWYSAP*PRSSPGTAIASPPTVDDAFSYM 412
N S T +SA+ S H K S P ++ G + T D F +
Sbjct: 350 NPTSSISSTSSSSSTSSAISTISQDHTKTVTSVSDEPTTITASGATSVTTTTKTD-FDTV 408
Query: 411 FRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSS 232
+ + + ++ S T +++SY V+ P+ S + ++ TA SS
Sbjct: 409 TTTIVSTSTLISASDSTSIIVSSY-VSTVTQPASTRVQTTTVSSISTSVKQPTASVASSS 467
Query: 231 ISLPTVAHSCPLXXXXXXXXXXXCEPVHGCSTSTAISAPINTT----DNTLPSTQN 76
+S+P+ + P P STS+ + + +++T + +PST +
Sbjct: 468 VSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSS 523
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 29.9 bits (64), Expect = 0.35
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Frame = +2
Query: 149 WTGSQHVRYQRAAVAANGHECATVGREIL-------EKNGSAVDAAIATLFCEGISCAQC 307
W GS +V A + A G C +GR+I+ GSA+ A + I C
Sbjct: 135 WIGSAYVLASNAVLPAVGVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWL-IVCRAI 193
Query: 308 MGLGGGFLATVYDASTGRVRVLNARERAPAAMTLNMYENASSTVGGLAIAVPGELRGYGA 487
GLGGG + ++ + + L R MY +T G A+ V G + G GA
Sbjct: 194 QGLGGGGIISLVNIIISDITPLRTRP---------MYSGILATAWGAAL-VAGPIIG-GA 242
Query: 488 LYQEYGRLPWR 520
+ Q R WR
Sbjct: 243 ICQ---RTTWR 250
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 28.7 bits (61), Expect = 0.81
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -1
Query: 540 AVGCTSSRHGKRPYSWYSAP*PRSSPGTAIASPP 439
A SS+H +RP SAP SSPGT A+ P
Sbjct: 502 AKSAQSSKHARRPSKQASAP---SSPGTTSAAVP 532
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 465 PGTAIASPPTVDDAFSYMFRVMAAGARSLALSTLTRPV-LASYTVARNPPPSPMHCAQDI 289
PG P VD+A + ++ AG ++ A+ PV LA +++ +P +P A
Sbjct: 140 PGPLSILLPVVDEANPPVSPIVTAGQKTFAVRMPQHPVALALISISDSPLAAPSANASTR 199
Query: 288 PS 283
PS
Sbjct: 200 PS 201
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -1
Query: 348 ASYTVARNPPPSPMHCAQDIPSQ----NNVAIAASTAEPFFSSI 229
+S+ + +PP SP+ C I ++ NN A + + ++ FS I
Sbjct: 111 SSFDASLSPPSSPLTCVSQIHTEQNFNNNDAFSLTNSQQAFSEI 154
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.3
Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 4/155 (2%)
Frame = -1
Query: 459 TAIASPPTVDDAFSYMFRVMAAGARSLA----LSTLTRPVLASYTVARNPPPSPMHCAQD 292
+A+A P V++ +F + G S L+ L +P+ +S T N S H +
Sbjct: 131 SAVACPSLVNNQVYQVFFGVGNGNPSCVGIAVLAVLPQPISSSSTY--NSTTSSYHNSTS 188
Query: 291 IPSQNNVAIAASTAEPFFSSISLPTVAHSCPLXXXXXXXXXXXCEPVHGCSTSTAISAPI 112
P + AST +S TV + + TST S
Sbjct: 189 TPPPTITSTKASTV----TSTEATTVTTTTAVTVTATETYTVTATNGGSTITSTGASTVT 244
Query: 111 NTTDNTLPSTQNRRRLSQNLTIFNVGTGVRAK*MV 7
+T +T+ STQ + + T VG A +V
Sbjct: 245 STQPSTVTSTQRKNTATTTKTTTYVGPSPSASSVV 279
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 379 GVEYPHPSRARVVHGR*EPAPESHALRARYPLT 281
G+EYP P + + HG+ + + A+ R +T
Sbjct: 77 GIEYPPPEKPKKAHGKGKSSKRPKAVDRRRSIT 109
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.8 bits (54), Expect = 5.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 206 ECATVGREILEKNGSAVDAAIATLFC 283
EC +GR IL ++G V A I C
Sbjct: 567 ECPALGRFILRRSGDTVAAGIVKELC 592
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 5.7
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 6/179 (3%)
Frame = -1
Query: 543 SAVGCTSSRHGKRPYSWYSAP*PRSSPGTAIASPP----TVDDAFSYMFRVMAAGARSLA 376
S+ TSS + S+ S+ T ASP T A S + + SLA
Sbjct: 71 SSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLA 130
Query: 375 LSTLTRPVLASYTVARNPPPSPMHCAQDIPSQ--NNVAIAASTAEPFFSSISLPTVAHSC 202
S++T LAS ++ + S + + S N+ A T+ SS+S ++S
Sbjct: 131 SSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSA 190
Query: 201 PLXXXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPSTQNRRRLSQNLTIFNVGTGV 25
S+ ++ +A + T ++L S+ S T ++ + V
Sbjct: 191 TSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTV 249
>SPBC25H2.02 |ths1||threonine-tRNA ligase Ths1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 5.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 159 EPVHGCSTSTAISAPINTTDNTLPSTQNRRRLSQNLTIFNVG 34
+ VH + I + +DNTLP +L+Q IF VG
Sbjct: 614 DKVHNILSEADIFVDTDKSDNTLPKKIRNAQLAQYNFIFVVG 655
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 25.8 bits (54), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 377 ARERAPAAMTLNMYENASSTVGGLAIAVPGELRGYGALYQEY 502
+R PA+ +L +E + S GL+ + E R +G + EY
Sbjct: 155 SRSSTPASPSLESHEFSESREAGLSQSNGFEARSHGTGFDEY 196
>SPCC18.16c |fmn1||riboflavin kinase Fmn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 163
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 401 MTLNMYENASSTVGGLAIAVPGELRGYGALYQEYGRLPWRELVQPTAEL 547
MT+N+ E VG + P +R G + +GR +EL PTA +
Sbjct: 1 MTVNLEEKRPEIVGPEKVQSPYPIRFEGKVVHGFGR-GSKELGIPTANI 48
>SPCC1393.09c |||RWD domain|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 146 PWTGSQHVRYQRAAVAANGHEC 211
PW G + + + VA N EC
Sbjct: 73 PWLGEEEIERLKQVVAQNAEEC 94
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,688,369
Number of Sequences: 5004
Number of extensions: 51246
Number of successful extensions: 176
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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