Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6h18
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 135 3e-32
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 128 3e-30
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 120 1e-27
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 120 1e-27
Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical pr... 107 5e-24
U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 77 1e-14
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 77 1e-14
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.3
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 29 4.0
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 29 4.0
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 4.0
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 28 6.9
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 6.9
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 28 6.9
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80443-4|AAD32268.1| 202|Caenorhabditis elegans Hypothetical pr... 27 9.2
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 27 9.2
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 27 9.2
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 27 9.2
AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical ... 27 9.2
AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical ... 27 9.2
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 27 9.2
AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical ... 27 9.2
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 135 bits (326), Expect = 3e-32
Identities = 69/171 (40%), Positives = 105/171 (61%), Gaps = 4/171 (2%)
Frame = +2
Query: 170 RYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDA 349
+Y +AAVAA+ C+ +GR IL K G+AVD+AIA LFC G+ G+GGG T+Y+A
Sbjct: 100 KYSKAAVAADNEICSEIGRNILLKGGNAVDSAIAALFCIGVMDTHSAGIGGGHFMTIYNA 159
Query: 350 STGRVRVLNARERAPAAMTLNMYENA--SSTVGGLAIAVPGELRGYGALYQEY--GRLPW 517
+T V++ARE AP A T MY + S +G AIAVPGEL G ++ + G++ W
Sbjct: 160 TTKECTVIDAREIAPLAATEEMYRDKWNQSRIGWKAIAVPGELHGLRTEFERFGSGKVEW 219
Query: 518 RELVQPTAELCRRGHRVTEYMGRVLQTFSDRIMAEPSMRELYVNKATGKVW 670
R+L++PT +L G+ + + + L +I AEP+M+ ++N T +V+
Sbjct: 220 RQLLKPTIDLLAEGYPTSHALAKALNQNEHQIRAEPTMKN-FINPETQRVF 269
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 128 bits (310), Expect = 3e-30
Identities = 62/171 (36%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Frame = +2
Query: 170 RYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDA 349
++++AA+ ++ C+ +G EIL K G+++DA+IA++FC G+ Q G+GGGFL T +D
Sbjct: 34 KFEKAALTSDNAACSKIGGEILRKGGNSIDASIASMFCLGVVNPQSSGIGGGFLMTYFDQ 93
Query: 350 STGRVRVLNARERAPAAMTLNMYENAS--STVGGLAIAVPGELRGYGALYQEY--GRLPW 517
+G ++ARE APAA + +M+ N S S G A PGE+ GY +++++ G++ W
Sbjct: 94 KSGDCYSIDARETAPAAASRDMFLNDSDGSKYGFKAAGTPGEIAGYWHIFKKFGSGKVTW 153
Query: 518 RELVQPTAELCRRGHRVTEYMGRVLQTFSDRIMAEPSMRELYVNKATGKVW 670
+ELVQP+ +L R GH V+ Y+ V++ PS++ ++N T +
Sbjct: 154 KELVQPSVKLAREGHPVSPYLATVMKVKERHFRLFPSVKH-WINPETNDTY 203
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 120 bits (288), Expect = 1e-27
Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Frame = +2
Query: 152 TGSQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFL 331
+GS Y++AAV ++ C+ +GR++L + G+AVDA IA+L C G Q G+GGGF+
Sbjct: 65 SGSLFAHYKKAAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFV 124
Query: 332 ATVYDASTGRVRVLNARERAPAAMTLNMY-ENASSTVGGL-AIAVPGELRGYGALYQEY- 502
T+Y+ASTG + +NARE APAA T M+ +N +V G +IA P EL G+ ++ Y
Sbjct: 125 MTLYNASTGMCQTINARETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVFNMYG 184
Query: 503 -GRLPWRELVQPTAELCRRGHRVTEYMGRVLQTFSDRIMAEPSMRELY 643
G++ W L QP+ L G V+ + ++ FS I P +Y
Sbjct: 185 SGKVSWARLFQPSITLAHDGFPVSSNL--AMRKFSRDIFVNPKTNRVY 230
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 120 bits (288), Expect = 1e-27
Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 4/168 (2%)
Frame = +2
Query: 152 TGSQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFL 331
+GS Y++AAV ++ C+ +GR++L + G+AVDA IA+L C G Q G+GGGF+
Sbjct: 95 SGSLFAHYKKAAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFV 154
Query: 332 ATVYDASTGRVRVLNARERAPAAMTLNMY-ENASSTVGGL-AIAVPGELRGYGALYQEY- 502
T+Y+ASTG + +NARE APAA T M+ +N +V G +IA P EL G+ ++ Y
Sbjct: 155 MTLYNASTGMCQTINARETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVFNMYG 214
Query: 503 -GRLPWRELVQPTAELCRRGHRVTEYMGRVLQTFSDRIMAEPSMRELY 643
G++ W L QP+ L G V+ + ++ FS I P +Y
Sbjct: 215 SGKVSWARLFQPSITLAHDGFPVSSNL--AMRKFSRDIFVNPKTNRVY 260
>Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical
protein Y7A9A.1 protein.
Length = 607
Score = 107 bits (258), Expect = 5e-24
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 7/178 (3%)
Frame = +2
Query: 158 SQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLAT 337
S+ ++ AA A+ CA + R ++ + G+AVDAAIA FC G+ G+GGG
Sbjct: 65 SKSAIFKNAAAVADSRFCAEIARNVIIQGGNAVDAAIAATFCNGVVLPYATGIGGGDFIV 124
Query: 338 VYDASTGRVRVLNARERAPAAMTLNMY--ENASSTVGGLAIAVPGELRGYGALYQEYGR- 508
+Y + LN+RE AP+ T MY + S+ G +I +PGEL G YQ+YG
Sbjct: 125 IYLKEEKKCVFLNSRETAPSLATEKMYVHDKDSAQFGYQSIGIPGELHGLWTAYQKYGSK 184
Query: 509 -LPWRELVQPTAELCR--RGHR-VTEYMGRVLQTFSDRIMAEPSMRELYVNKATGKVW 670
+PW +LV P A+L + H+ + +Y R+ + +R E ++R LY +K TG+ +
Sbjct: 185 VIPWSDLVMPAAQLAKGFPMHKAMHDYFDRI-SKYKERPEIE-ALRNLYTSKFTGEFY 240
>U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical
protein T19H12.6 protein.
Length = 619
Score = 82.6 bits (195), Expect = 2e-16
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Frame = +2
Query: 179 RAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDASTG 358
RAAV + EC+ +G+ IL + G+AV+AAIA FC + LGGG + TV G
Sbjct: 221 RAAVFTSSAECSAIGKSILVRGGNAVEAAIAASFCLMGAMPNKASLGGGLMMTV-KTKNG 279
Query: 359 RVRVLNARERAPAAMTLN-MYENASST-VGGLAIAVPGELRGYGALYQEY--GRLPWREL 526
+ ARE AP ++ + +N T VG A PG L G +Q++ R+ W+ L
Sbjct: 280 NATTIIARETAPMNADIDELKKNPELTHVGPKASGTPGTLNGLYRAFQKFSSNRVQWKHL 339
Query: 527 VQPTAELCRRGHRVTE 574
V PT + C +G +++E
Sbjct: 340 VLPTIQQCNKGFKLSE 355
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Frame = +2
Query: 158 SQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLAT 337
S ++ + A+ ++ +C+ +G++I E G+AVDA +AT FC G G G +
Sbjct: 309 SSSEKFSKFAIISHHEDCSEIGKKIHETGGNAVDAMVATEFCISAVHPHTTGPGFGAVIV 368
Query: 338 VYDASTGRVRVLNARERAPAAMTLNMY--ENASSTVGGLAIAVPGELRGYGALYQEY--G 505
++ V++ RERAP N + + +G ++ VPG + Y+++ G
Sbjct: 369 LHSKKKNGTFVIDGRERAPKNANKNTFVINPTIAHIGYSSMGVPGWISVLWTAYKQFGSG 428
Query: 506 RLPWRELVQPTAELCRRGH-RVTEYMGRVLQTFSDRIMAEPSMRELYVNKAT 658
++ W+ L++PT EL + R+ +G+ ++ + I+ E S + ++++AT
Sbjct: 429 KIVWKSLIEPTIELLKTNRVRIDRLLGQAFESRRNHILHEKSF-DNWLSQAT 479
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Frame = +2
Query: 158 SQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLAT 337
S ++ + A+ ++ +C+ +G++I E G+AVDA +AT FC G G G +
Sbjct: 259 SSSEKFSKFAIISHHEDCSEIGKKIHETGGNAVDAMVATEFCISAVHPHTTGPGFGAVIV 318
Query: 338 VYDASTGRVRVLNARERAPAAMTLNMY--ENASSTVGGLAIAVPGELRGYGALYQEY--G 505
++ V++ RERAP N + + +G ++ VPG + Y+++ G
Sbjct: 319 LHSKKKNGTFVIDGRERAPKNANKNTFVINPTIAHIGYSSMGVPGWISVLWTAYKQFGSG 378
Query: 506 RLPWRELVQPTAELCRRGH-RVTEYMGRVLQTFSDRIMAEPSMRELYVNKAT 658
++ W+ L++PT EL + R+ +G+ ++ + I+ E S + ++++AT
Sbjct: 379 KIVWKSLIEPTIELLKTNRVRIDRLLGQAFESRRNHILHEKSF-DNWLSQAT 429
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/126 (20%), Positives = 47/126 (37%)
Frame = -1
Query: 459 TAIASPPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQ 280
T + +PPT Y ++ + ++ T P T PP +P P+
Sbjct: 456 TVVLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVP-TTTNTPPANPTTAT---PTT 511
Query: 279 NNVAIAASTAEPFFSSISLPTVAHSCPLXXXXXXXXXXXCEPVHGCSTSTAISAPINTTD 100
+ +T P S+I+ ++ S P P H ++ + P+ TT+
Sbjct: 512 VGTSKQTNTISPHLSTIT-GSIVTSTPTMAPQTSASPTTT-PTHTTASQPTTTKPVVTTN 569
Query: 99 NTLPST 82
+ PST
Sbjct: 570 SVTPST 575
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = -1
Query: 375 LSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSCPL 196
L+TLT P + T PS P+ VA ++ P ++ PT+A + P
Sbjct: 628 LTTLTTPTVPVTTTV---VPSSATVPTTPPTTVTVAATTTSKAPVVTTS--PTLAPTSPT 682
Query: 195 XXXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 82
P + +T +AP+N T +T T
Sbjct: 683 KLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPT 720
Score = 27.5 bits (58), Expect = 9.2
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = -1
Query: 366 LTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSC--PLX 193
+T V+ S PP+ + A S+ V + T P S LPT S
Sbjct: 638 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPT-SPTKLPTSPPSTVGTSP 696
Query: 192 XXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 82
PV+ S++TA +AP+N T T T
Sbjct: 697 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT 733
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 372 STLTRPVLASYTVARNPPPSPMHCAQD-IPSQNNVAIAASTAEPFFSSISLPT 217
S + RPV+++ T +PPP P H + IP ++ + +++P ++ + T
Sbjct: 488 SYIPRPVVSTSTSFSHPPPLPAHQSNSKIPRMSSASEQRKSSQPPQPAVRMQT 540
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 372 STLTRPVLASYTVARNPPPSPMHCAQD-IPSQNNVAIAASTAEPFFSSISLPT 217
S + RPV+++ T +PPP P H + IP ++ + +++P ++ + T
Sbjct: 504 SYIPRPVVSTSTSFSHPPPLPAHQSNSKIPRMSSASEQRKSSQPPQPAVRMQT 556
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = -1
Query: 375 LSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSCPL 196
L+TLT P + T PS P+ VA ++ P ++ PT+A + P
Sbjct: 572 LTTLTTPTVPVTTTV---VPSSATVPTTPPTTVTVAATTTSKAPVVTTS--PTLAPTSPT 626
Query: 195 XXXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 82
P + +T +AP+N T +T T
Sbjct: 627 KLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPT 664
Score = 27.5 bits (58), Expect = 9.2
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = -1
Query: 366 LTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSC--PLX 193
+T V+ S PP+ + A S+ V + T P S LPT S
Sbjct: 582 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPT-SPTKLPTSPPSTVGTSP 640
Query: 192 XXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 82
PV+ S++TA +AP+N T T T
Sbjct: 641 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT 677
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -1
Query: 444 PPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQ--NNV 271
P + ++ ++ A A+ + L R + ++ PPP H QD+ + +++
Sbjct: 787 PELTQEELDHIAKITAMAAQDVQLPATQRSITHKVSLTPPPPPPSKHFEQDLTQEELDHI 846
Query: 270 AIAASTAE 247
A A A+
Sbjct: 847 ARIAEMAD 854
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = -1
Query: 471 SSPGTAIASPPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARN----PPPSPMH 304
++PG A S + + R A GA S + L + + R PPP+P
Sbjct: 633 AAPGAASLSTEKLTQSSRKRARTCAVGAASGVTPVVASLTLQDHQLLRPHTHAPPPTPSR 692
Query: 303 CAQDIPSQNNVAIAAS 256
A PS I++S
Sbjct: 693 SAPSSPSSKKCEISSS 708
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 159 EPVHGCSTSTAISAPINTTDNTLPSTQNRRRLSQNL 52
+PV ++ST+ AP N + P+T ++ SQN+
Sbjct: 276 QPVSSSTSSTSSPAPTNPPTTSRPTTASQSTASQNV 311
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -1
Query: 444 PPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQ--NNV 271
P + ++ ++ A A+ + L R + ++ PPP H QD+ + +++
Sbjct: 3469 PELTQEELDHIAKITAMAAQDVQLPATQRSITHKVSLTPPPPPPSKHFEQDLTQEELDHI 3528
Query: 270 AIAASTAE 247
A A A+
Sbjct: 3529 ARIAEMAD 3536
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 302 QCMGLGGGFLATVYDASTGRVRVLNARERAPAAMTLNM-----YENASSTVGGLAIAVPG 466
+C G + A V DAS V + + PA+ L + ++ SS +
Sbjct: 401 KCTSSGPIYTALVDDASVFSVSIDGVEQETPASFGLRLRANPTFKQCSSKTSPKDVQYEW 460
Query: 467 ELRGYGALYQEYGRLP 514
+L G G +Y + +LP
Sbjct: 461 KLNGEGKMYDDGLKLP 476
>U80443-4|AAD32268.1| 202|Caenorhabditis elegans Hypothetical
protein C24A11.1 protein.
Length = 202
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 490 VPGVRTLAVARASATNSRIVPSWTPRHRIHGQSITNLQRPNHGGTVYEGTLCQQ 651
+P T++ + SA + +VPS+ PR + G ++T++ P Y T+C Q
Sbjct: 1 MPIEATMSTSNESA--NLLVPSFLPRGEVLGWNLTSVVNPVTRRKEYTYTVCVQ 52
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 27.5 bits (58), Expect = 9.2
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 477 PRSSPGTAIASPPTVDDAFSYMFRVMAA-GARSLALSTLTRPVLASYTVARNPPPSPMHC 301
P +S ++I P V A S +V GA+ LA + V +TV P P
Sbjct: 615 PSTSEVSSIEHKPFVPPARSRYAKVKPIIGAKKLAALNEVKNV---HTV-----PEPSAP 666
Query: 300 AQDIPSQNNVAIAASTAEPFFSSISLPTVA 211
A+ I S+ + + S+++P +S +P+VA
Sbjct: 667 AEPIVSEAPLQVKTSSSDPIVTSTEVPSVA 696
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 304 MHGTRG--RVPSDRVRREHGTGEGTQRQRTSSRRHDPEHVRER 426
+H TRG + PSDRV + G T S H P + E+
Sbjct: 624 LHYTRGISKTPSDRVEKSRYLSRGVSTPHTPSEVHIPYNNPEK 666
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Frame = +2
Query: 335 TVYDASTGRVRVLNARERAPAAMTLNMYENASSTVGGLAIAVPGELRGYGAL---YQEYG 505
T + +T + +VL+ + P + YE + + + + +L G GAL Y +Y
Sbjct: 626 TKLEVTTHQAKVLDEKHAEPEPNPADQYERLTHIIIDCSTIIYVDLMGQGALKDVYNDYK 685
Query: 506 RLPWRELVQPTAELCRRGHRVTEYM-----GRVLQTFSDRI 613
+ L T E R+ +++ GR+ + SD +
Sbjct: 686 TIGISVLFANTNEHVRQNFETSQFFEEVPRGRMFVSVSDAV 726
>AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical
protein T06D4.1b protein.
Length = 320
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 149 TAVAPALRSARLSTRPTTRCLAPKTGGGC-RKISPFS 42
T+ APA SAR S P L PK G RK+S ++
Sbjct: 243 TSEAPAEASARASEAPEAPALPPKRSRGIKRKLSEYA 279
>AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical
protein T06D4.1a protein.
Length = 441
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 149 TAVAPALRSARLSTRPTTRCLAPKTGGGC-RKISPFS 42
T+ APA SAR S P L PK G RK+S ++
Sbjct: 364 TSEAPAEASARASEAPEAPALPPKRSRGIKRKLSEYA 400
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 365 SPVPCSRRTRSLGTRPRVPCIARKISPHRTTSLSQHRQPSHSFQVSPS 222
+PVP ++ R+L PR SP + S S PS S PS
Sbjct: 199 APVPINKANRNLYRNPRGSLETPTDSPQKGFSSSTESSPSDSMNQFPS 246
>AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical
protein Y42G9A.4c protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 413 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 508
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 1 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 32
>AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical
protein Y42G9A.4b protein.
Length = 614
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 413 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 508
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 131 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 162
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 413 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 508
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 31 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 62
>AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical
protein Y42G9A.4d protein.
Length = 514
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 413 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 508
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 31 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,821,403
Number of Sequences: 27780
Number of extensions: 327526
Number of successful extensions: 1243
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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