Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6h17
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 168 4e-42
U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical pr... 108 3e-24
AC024791-26|AAK29889.1| 421|Caenorhabditis elegans Hypothetical... 79 3e-15
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 66 2e-11
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 62 3e-10
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 61 7e-10
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 61 7e-10
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 55 4e-08
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 54 8e-08
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 54 1e-07
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 52 4e-07
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 51 1e-06
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 51 1e-06
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 50 2e-06
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 50 2e-06
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 50 2e-06
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 49 3e-06
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 49 3e-06
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 49 4e-06
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 48 5e-06
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 48 7e-06
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 47 2e-05
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 46 4e-05
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 46 4e-05
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 45 5e-05
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 44 1e-04
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 42 4e-04
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 42 4e-04
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 42 6e-04
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 42 6e-04
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 41 0.001
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 40 0.002
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 40 0.002
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 38 0.009
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 38 0.009
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 34 0.088
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 33 0.15
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 33 0.20
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 30 1.4
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 30 1.4
AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical... 30 1.4
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.9
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 30 1.9
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 30 1.9
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 30 1.9
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 30 1.9
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 29 2.5
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.3
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 29 3.3
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 29 3.3
Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical pr... 28 5.8
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 28 5.8
U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical pr... 28 7.7
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 168 bits (408), Expect = 4e-42
Identities = 80/169 (47%), Positives = 117/169 (69%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 389
VRI+L+G+ G GKTSL++SL+ +E+ + VP + + + IPADVTPE V T+I+D+ I E+
Sbjct: 10 VRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSIVDLSIKEED 69
Query: 390 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 569
+ EI +A+VIC+V+SV + T++ I T WLP +R + E + PVILVGNK D
Sbjct: 70 ENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSDGTA 129
Query: 570 YSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVLHPINPI 716
+ D I I E EV+ C+ECSA+++ NVSE+FY AQKAV++P P+
Sbjct: 130 NNT-DKILPIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPL 177
>U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical
protein C47C12.4 protein.
Length = 398
Score = 108 bits (260), Expect = 3e-24
Identities = 53/118 (44%), Positives = 77/118 (65%)
Frame = +3
Query: 363 IDICIPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVIL 542
+D+ I E+ + EI +A+VIC+V+SV + T++ I T WLP +R + E + PVIL
Sbjct: 1 MDLSIKEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVIL 60
Query: 543 VGNKIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVLHPINPI 716
VGNK D + D I I E EV+ C+ECSA+++ NVSE+FY AQKAV++P P+
Sbjct: 61 VGNKSDGTANNT-DKILPIMEANTEVETCVECSARTMKNVSEIFYYAQKAVIYPTRPL 117
>AC024791-26|AAK29889.1| 421|Caenorhabditis elegans Hypothetical
protein Y47G6A.27 protein.
Length = 421
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 486 WLPFVRDNCPEDYRKPVILVGNKIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVS 665
WLP +R + E ++ PVILVGNK D + D I I E EV+ C+ECSA+++ NVS
Sbjct: 86 WLPLIRQSFGEYHKTPVILVGNKSDGTANNT-DKILPIMEANTEVETCVECSARTMKNVS 144
Query: 666 EMFYNAQKAVLHPINPI 716
E+FY AQKAV++P P+
Sbjct: 145 EIFYYAQKAVIYPTRPL 161
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 66.1 bits (154), Expect = 2e-11
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIP 380
R +I++LG GVGK++L + V F E P E+ +V +Q I+D
Sbjct: 2 REYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGT 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
EQ ++ +V+S+ Q T N + +R ++ P+ILVGNK D
Sbjct: 62 EQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEV--PMILVGNKCD 119
Query: 561 LIDYSVI--DNIWDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAV 695
L D V+ D ++A ++ +E SAK+ INVSE+FY+ + +
Sbjct: 120 LEDERVVGKDQGQNLARQFGSA--FLETSAKAKINVSEVFYDLVRQI 164
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 62.5 bits (145), Expect = 3e-10
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 389
+++++G+ GKT L++ ++F + +VP E +V +QV + D E
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 390 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL-I 566
VI + FS+D ++L I W P VR CP P+ILVGNK DL
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP---NVPIILVGNKRDLRS 123
Query: 567 DYSVIDNIWDIAEE--YPEVDRCI----------ECSAKSLINVSEMFYNAQKAVL 698
D + + + +E PE R I ECSAK+ + E+F A +A L
Sbjct: 124 DPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAAL 179
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 62.5 bits (145), Expect = 3e-10
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 389
+++++G+ GKT L++ ++F + +VP E +V +QV + D E
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 390 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL-I 566
VI + FS+D ++L I W P VR CP P+ILVGNK DL
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCP---NVPIILVGNKRDLRS 123
Query: 567 DYSVIDNIWDIAEE--YPEVDRCI----------ECSAKSLINVSEMFYNAQKAVL 698
D + + + +E PE R I ECSAK+ + E+F A +A L
Sbjct: 124 DPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAAL 179
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 61.3 bits (142), Expect = 7e-10
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
R ++ +++G+ VGKT +++S T+ F ++VP + + + V + D
Sbjct: 6 RQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQ 65
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E + V + FSV + + +A+ W+P +R +CP+ PVILVG K+D
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPD---APVILVGTKLD 122
Query: 561 LIDYSVIDNIWDIAEEYP-------------EVDRCIECSAKSLINVSEMFYNAQKAVLH 701
L D + + P + + +ECSA + ++++F +A +++LH
Sbjct: 123 LRDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILH 182
Query: 702 P 704
P
Sbjct: 183 P 183
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 61.3 bits (142), Expect = 7e-10
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
R ++ +++G+ VGKT +++S T+ F ++VP + + + V + D
Sbjct: 6 RQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQ 65
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E + V + FSV + + +A+ W+P +R +CP+ PVILVG K+D
Sbjct: 66 EDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPD---APVILVGTKLD 122
Query: 561 LIDYSVIDNIWDIAEEYP-------------EVDRCIECSAKSLINVSEMFYNAQKAVLH 701
L D + + P + + +ECSA + ++++F +A +++LH
Sbjct: 123 LRDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILH 182
Query: 702 P 704
P
Sbjct: 183 P 183
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 55.2 bits (127), Expect = 4e-08
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 386
++LL+G+ GVGK+ L+L + +TE ++ + I ++ + + I D E+
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ AH I +V+ + QET N + WL + E+ K +LVGNK DL
Sbjct: 73 FRTITSSYYRGAHGIIVVYDITDQETFNNV-KQWLQEIDRYACENVNK--LLVGNKCDLT 129
Query: 567 DYSVIDNIWDIAEEYPEV--DRCIECSAKSLINVSEMFYNAQKAVLHPINPI 716
++ A++Y +E SAKS NV + F + + P+
Sbjct: 130 AKRAVET--QAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPV 179
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 54.4 bits (125), Expect = 8e-08
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEI---TIPADVTPEQVPTNIIDIC 374
R ++++LG GVGK++L + V+ F E P E+ I D P + I+D
Sbjct: 2 REFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVL--EILDTA 59
Query: 375 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 554
EQ I+ +V+S+ Q+T + I VR E+ P++LVGNK
Sbjct: 60 GTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENV--PILLVGNK 117
Query: 555 IDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMF 674
DL + + +A ECSAK+ NV+ F
Sbjct: 118 CDLSHQRQVRSEEGLALAESWSCPFTECSAKNNQNVNVTF 157
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 54.0 bits (124), Expect = 1e-07
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIPEQS 389
+++++G GVGK++L L + +EF E+ P KA+ + E+ +I+D ++
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTA-GQED 77
Query: 390 LEQVAEEIERA--HVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL 563
+ + R+ IC VFS+ E+ + +R D P++LVGNK D+
Sbjct: 78 YSAIRDNYYRSGEGFIC-VFSILDMESFEATNEFREQILRVK-NSDSSVPIVLVGNKGDM 135
Query: 564 IDYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMFYNAQK 689
D V+ ++ + E C +E SAK NV ++FY+ +
Sbjct: 136 RDQRVVSA--ELCRQRAEQWGCHYVETSAKRRENVDKVFYDLMR 177
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP-ADVTPEQVPTNIIDICIPEQS 389
+++++G+ GVGK+SL + ++F ++ P E+ I ++ V +++D E+
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEEF 78
Query: 390 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 569
+ I +VFSV +++ + + +R +Y PV+LV NK+DLI+
Sbjct: 79 SAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY--PVLLVANKVDLIN 136
Query: 570 YSVI 581
V+
Sbjct: 137 QRVV 140
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP-ADVTPEQVPTNIIDICIPEQS 389
+++++G+ GVGK+SL + ++F ++ P E+ I ++ V +++D E+
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQEEF 78
Query: 390 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 569
+ I +VFSV +++ + + +R +Y PV+LV NK+DLI+
Sbjct: 79 SAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY--PVLLVANKVDLIN 136
Query: 570 YSVI 581
V+
Sbjct: 137 QRVV 140
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 50.8 bits (116), Expect = 1e-06
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 561 L-IDYSVIDNI-------------WDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
L D ++ + + +A+E V + +ECSA + + ++F A +AVL
Sbjct: 119 LREDRDTVERLRERRLQPVSQTQGYVMAKEIKAV-KYLECSALTQRGLKQVFDEAIRAVL 177
Query: 699 HP 704
P
Sbjct: 178 TP 179
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 50.8 bits (116), Expect = 1e-06
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 561 L-IDYSVIDNI-------------WDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
L D ++ + + +A+E V + +ECSA + + ++F A +AVL
Sbjct: 119 LREDRDTVERLRERRLQPVSQTQGYVMAKEIKAV-KYLECSALTQRGLKQVFDEAIRAVL 177
Query: 699 HP 704
P
Sbjct: 178 TP 179
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 561 L-IDYSVIDNI-------------WDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
L D ++ + + +A+E V + +ECSA + + ++F A +AV+
Sbjct: 119 LREDRDTVERLRERRLQPVSQTQGYVMAKEIKAV-KYLECSALTQRGLKQVFDEAIRAVV 177
Query: 699 HP 704
P
Sbjct: 178 TP 179
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 561 L-IDYSVIDNI-------------WDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
L D ++ + + +A+E V + +ECSA + + ++F A +AV+
Sbjct: 119 LREDRDTVERLRERRLQPVSQTQGYVMAKEIKAV-KYLECSALTQRGLKQVFDEAIRAVV 177
Query: 699 HP 704
P
Sbjct: 178 TP 179
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
+ ++ +++G+ VGKT L++S T F E++P + + V + + D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQ 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 561 L-IDYSVIDNI-------------WDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
L D ++ + + +A+E V + +ECSA + + ++F A +AV+
Sbjct: 119 LREDRDTVERLRERRLQPVSQTQGYVMAKEIKAV-KYLECSALTQRGLKQVFDEAIRAVV 177
Query: 699 HP 704
P
Sbjct: 178 TP 179
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 49.2 bits (112), Expect = 3e-06
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 386
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADLE 135
Query: 567 DYSVIDNIWDIAEEYPE--VDRCIECSAKSLINVSEMFYNAQKAV 695
+ + AEE +ECSAK NV E F++ + V
Sbjct: 136 NERHVAR--HEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLV 178
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 49.2 bits (112), Expect = 3e-06
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 386
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADLE 135
Query: 567 DYSVIDNIWDIAEEYPE--VDRCIECSAKSLINVSEMFYNAQKAV 695
+ + AEE +ECSAK NV E F++ + V
Sbjct: 136 NERHVAR--HEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLV 178
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 49.2 bits (112), Expect = 3e-06
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 386
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADLE 135
Query: 567 DYSVIDNIWDIAEEYPE--VDRCIECSAKSLINVSEMFYNAQKAV 695
+ + AEE +ECSAK NV E F++ + V
Sbjct: 136 NERHVAR--HEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLV 178
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 48.8 bits (111), Expect = 4e-06
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 386
++L++G+ GVGK+SL+L F+E ++ + I D+ ++V I D E+
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQER 71
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ H + +V+ V E+ + WL + +NC + +K +LVGNK +
Sbjct: 72 FRTITSTYYRGTHGVVVVYDVTNGESFGNVKR-WLQEIENNC-DSVQK--VLVGNKCEEN 127
Query: 567 DYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMF 674
+ V+ + A Y + E SAK NV MF
Sbjct: 128 ERRVV--LESDARNYAQSMNISFFETSAKEDKNVEPMF 163
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/136 (22%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKA-EEITIPADVTPEQVPTNIIDICIPEQ 386
++++++G+ GKTSL+++ ++F ++ + + + + N+ D +
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTA-GQG 63
Query: 387 SLEQV-AEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL 563
+ EQ+ A+V + FS+ ++TL + W+P +R ++ P++LVG K DL
Sbjct: 64 NYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNV--PIMLVGTKNDL 121
Query: 564 IDYSVIDNIWDIAEEY 611
+D + D+ + E+Y
Sbjct: 122 VDDA--DSRNTVTEDY 135
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICI 377
RT RI++ G+ VGK+S ++ ++ +FT +P + +V V + D
Sbjct: 460 RTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAG 519
Query: 378 PEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKI 557
E+ RA +V+ V +++ ++ W+ ++++ P+ILVGNK+
Sbjct: 520 QERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRD-WIETIKESTERSI--PIILVGNKV 576
Query: 558 DL 563
D+
Sbjct: 577 DM 578
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 48.0 bits (109), Expect = 7e-06
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +3
Query: 195 TVPRTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDIC 374
T +T +I ++G+ G GK+SLI L+T E+ A+EI + + D+
Sbjct: 233 TSHKTYKIYVVGDTGTGKSSLISQLITSEYKNAF---ADEIQDYENTVSICIGGVECDLV 289
Query: 375 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 554
E + H +V+S+D + + K A L +RD P P ++ GNK
Sbjct: 290 FFESDMSDPCWLTNEIHAFLVVYSIDSKSSW-KQAMVALEMIRDR-PGTRNLPTLVAGNK 347
Query: 555 IDL 563
IDL
Sbjct: 348 IDL 350
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 47.6 bits (108), Expect = 9e-06
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 386
+I+L+G PGVGK++L+ EF P E T V + V I D E+
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ A +V+ + + +T + WL +RD+ ED + LVGNK DL
Sbjct: 70 FRCGASSYYRGALGALLVYDISKHKTYESV-EQWLKVLRDHANEDI--VITLVGNKSDL- 125
Query: 567 DYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMFYN 680
++V + I E + IE SA NV F N
Sbjct: 126 SHAVPTDEAKIYAERNHIS-FIETSALDNTNVEAAFTN 162
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 47.6 bits (108), Expect = 9e-06
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 386
+++LLGE VGK+SL+L V +F E+ A +T + + I D E+
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
A +V+ + QE+ K + R P + L GNK D+
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIV---MALAGNKADVA 137
Query: 567 DYSVIDNIWDIAEEYPEVDRCI--ECSAKSLINVSEMFYNAQKAVLHPINP 713
+ ++ ++ A Y E + + E SAK+ +NV+++F K + PI P
Sbjct: 138 NKRTVE--YEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL--PIGP 184
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 46.8 bits (106), Expect = 2e-05
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEI-TIPADVTPEQVPTNIIDICIPEQS 389
R+++LG VGKT++I + EF+ E++ + + +P +I+D
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEFSSKYKETIEDLHSREFRIQGVPLPLDILDTNFNFPD 78
Query: 390 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 569
+ +++ I A +VFSVD + +++ W + + P+++VGNK D+ +
Sbjct: 79 MRRLS--IASASAFLLVFSVDDVTSFKEMSDIWQE-ICSRRSDLNELPIVVVGNKCDVEN 135
Query: 570 YSVIDNIWDIAEEYPEVD-RCIECSAKSLINVSEMF 674
+ + D R IE SAK I ++++F
Sbjct: 136 KKIYEETAKAFTNRLSSDVRYIEVSAKDNIRITDVF 171
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 45.6 bits (103), Expect = 4e-05
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
+ ++ +++G+ VGKT L+LS T F E++ + + V + ++ D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
+ + + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 561 L-IDYSVIDNI-------------WDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
L D I+ + + +A+E V + +ECSA + I + ++F A + L
Sbjct: 119 LREDRDTIERLRERRLQPVSHTQGYVMAKEIKAV-KYLECSALTQIGLKQVFDEAIRTGL 177
Query: 699 HP 704
P
Sbjct: 178 TP 179
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 45.6 bits (103), Expect = 4e-05
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 386
+ +++G+ GVGK+ L+ ++F P E T +V+ +++ I D E+
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
A +V+ + R+ T N +++ WL + + + L+GNK DL
Sbjct: 73 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLADAKSLTNPN--TAIFLIGNKADLE 129
Query: 567 DYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMFYNAQKAVLHPI 707
D D ++ A+ + E + +ECSAK+ NV + F K + I
Sbjct: 130 DQR--DVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNI 176
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 45.6 bits (103), Expect = 4e-05
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFT-EHVPPKAEEITIPADVTPEQVPTNIIDICIP 380
+ ++ +++G+ VGKT L+LS T F E++ + + V + ++ D
Sbjct: 2 QAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQ 61
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
+ + + V + F+++ + + W P V +CP P+ILVG K D
Sbjct: 62 DDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCP---NTPIILVGTKAD 118
Query: 561 L-IDYSVIDNI-------------WDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
L D I+ + + +A+E V + +ECSA + I + ++F A + L
Sbjct: 119 LREDRDTIERLRERRLQPVSHTQGYVMAKEIKAV-KYLECSALTQIGLKQVFDEAIRTGL 177
Query: 699 HP 704
P
Sbjct: 178 TP 179
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Frame = +3
Query: 207 TVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQ 386
T++IL++GE GVGK+SL+L V + F P +A I + VT + N + + I +
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDVFD---PEQAATIGVDFRVTSMAIDGNRVKLAIWDT 67
Query: 387 SLEQVAEEIERAH------VICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVG 548
+ ++ + ++ VIC V+ V + + K+ +W+ V C D ++V
Sbjct: 68 AGQERFRTLTPSYYRGAQGVIC-VYDVTSRSSFEKL-NHWMQEVDTYCTND-NIIKMMVA 124
Query: 549 NKIDL 563
NKID+
Sbjct: 125 NKIDM 129
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 45.2 bits (102), Expect = 5e-05
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPA-DVTPEQVPTNIIDICIPEQ 386
++LL+G+ GVGKT ++ + F T + + I ++ +++ I D E+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
A I +V+ + ++ + IA WL + ++ ED K +++GNK D+
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHASEDVVK--MILGNKCDMS 127
Query: 567 DYSVIDNIWDIAEEYPEVDRCI---ECSAKSLINVSEMFYNAQKAVL 698
D V+ + E+ + D I E SAK ++V FY+ +A+L
Sbjct: 128 DRRVVSR--ERGEKIAQ-DHGISFHETSAKLNVHVDTAFYDLAEAIL 171
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 43.6 bits (98), Expect = 1e-04
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 7/162 (4%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPE 383
+++++LG+ GVGKTSL+ V F+ A+ +T ++ V I D +
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTA-GQ 68
Query: 384 QSLEQVAEEIERAHVICIV-FSVDRQETLNKIATYWLPFVRDNCPED-YRKPVILVGNKI 557
+ + + R C++ F V + + ++ F+ P D P +L+GNK+
Sbjct: 69 ERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKV 128
Query: 558 DLIDYSVIDNIWDIAEEYPEVDRCI---ECSAKSLINVSEMF 674
DL + + A+ + + I E SAK +NV F
Sbjct: 129 DLESQRAVSS--KRAQSWCQTKGNIPYYEVSAKEALNVEAAF 168
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEE-ITIPADVTPEQVPTNIIDICIPEQ 386
+RI+++G GVGK++L + + F + P E+ T V + I+D E+
Sbjct: 18 LRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEE 77
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDL 563
+ + IVF+V + + ++ R +D+ P+ILVGNK DL
Sbjct: 78 FSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF--PIILVGNKADL 134
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 41.9 bits (94), Expect = 4e-04
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 3/157 (1%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP-ADVTPEQVPTNIIDICIPEQS 389
+I++LG GVGK++L L V F E+ + V E I+D EQ
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAGTEQF 64
Query: 390 LEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLID 569
A +VFS+ T + + + E P+ILVGNK DL +
Sbjct: 65 TGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKE---VPMILVGNKSDLAE 121
Query: 570 YSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMF 674
+D A + E + E SA+ NVSE+F
Sbjct: 122 TRQVDE--SEAHNFAEKLKIPYFETSARLNQNVSEVF 156
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 41.9 bits (94), Expect = 4e-04
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK--AEEITIPADVTPEQVPTNIIDICIPEQ 386
+++L+G+ GVGK++L+ EF E T V + V I D E+
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ A +V+ + + T + WL +RD+ D ++LVGNK DL
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHVTYENVER-WLKELRDHA--DQNIVIMLVGNKSDLR 129
Query: 567 DYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMFYN 680
+ D A+ Y E ++ IE SA NV F N
Sbjct: 130 HLRAVPT--DEAKIYAERNQLSFIETSALDSTNVEAAFTN 167
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 41.5 bits (93), Expect = 6e-04
Identities = 34/165 (20%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 386
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
A I +V+ + + + I W+ + ++ D + +++GNK D+
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVER--MIIGNKCDIE 126
Query: 567 DYSVI--DNIWDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAV 695
+ + D +A EY + +E SAK+ +N+ E F+ + +
Sbjct: 127 ERREVSRDRGEQLAIEYG--TKFLETSAKANLNIDEAFFTLARDI 169
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 41.5 bits (93), Expect = 6e-04
Identities = 34/165 (20%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 386
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
A I +V+ + + + I W+ + ++ D + +++GNK D+
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVER--MIIGNKCDIE 126
Query: 567 DYSVI--DNIWDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAV 695
+ + D +A EY + +E SAK+ +N+ E F+ + +
Sbjct: 127 ERREVSRDRGEQLAIEYG--TKFLETSAKANLNIDEAFFTLARDI 169
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 41.1 bits (92), Expect = 8e-04
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFT-EHVPP-KAEEITIPADVTPEQVPTNIIDICIPEQ 386
+I+LLGE VGK+SL+L V +F+ +H+ +A +V Q +I D E+
Sbjct: 14 KIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEK 73
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
++ + +VF + +++ K+ W+ ++ C + + +++VGNKIDL
Sbjct: 74 YHALGPIYYRGSNGVLLVFDITDRKSFEKVKN-WVLEIK-TCLGNTAE-ILIVGNKIDLE 130
Query: 567 DYSVIDNIWDIAEEYPEVDRCI--ECSAKSLINVSEMF 674
+ + AE Y E + + E SA+ + +S+ F
Sbjct: 131 EERQVTR--QDAEAYAESEGALYMETSAQDNVGISDAF 166
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 40.7 bits (91), Expect = 0.001
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEF--TEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQ 386
+++ LGE VGKTS+I + + F T + ++ + + + D E+
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 72
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ I + V +V+ + + ++ T W+ VR+ D ++LVGNK DL
Sbjct: 73 FRSLIPSYIRDSSVAVVVYDITNANSFHQ-TTKWVDDVRNERGCDV--IIVLVGNKTDLA 129
Query: 567 DYSVIDNIWDIAEEYPEVD-RCIECSAKSLINVSEMF 674
D + + D ++ +++ IE SAK+ NV ++F
Sbjct: 130 DKRQV-STEDGEKKARDLNVMFIETSAKAGYNVKQLF 165
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 39.9 bits (89), Expect = 0.002
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEF--TEHVPPKAEEITIPADVTPEQVPTNIIDICIPEQ 386
+++ LGE VGKTSLI + + F T + ++ + V + D E+
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 71
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKIDLI 566
+ I + V +V+ + + ++ + W+ VR D ++LVGNK DL
Sbjct: 72 FRSLIPSYIRDSTVAVVVYDITNSNSFHQ-TSKWIDDVRTERGSDV--IIMLVGNKTDLS 128
Query: 567 DYSVIDNIWDIAE-EYPEVD-RCIECSAKSLINVSEMF 674
D + D E + E++ IE SAK+ NV ++F
Sbjct: 129 DKRQVTT--DEGERKAKELNVMFIETSAKAGYNVKQLF 164
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 39.5 bits (88), Expect = 0.002
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTP----EQVPTNIIDI 371
+TV+++++GE G GKT+L+ + F E P I + + + + D
Sbjct: 5 KTVKVVVVGESGAGKTALLTCFLDNTF-ETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDT 63
Query: 372 CIPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGN 551
E+ + I A V +V + + + + W + D D+ I+VGN
Sbjct: 64 AGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIR-WKGII-DKNKSDFTS-TIIVGN 120
Query: 552 KIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMF 674
K DL+ + I E D IE SAK N+ ++F
Sbjct: 121 KHDLVSEKRSPRLTAIIRE--TNDEYIETSAKMRKNIKKLF 159
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPAD-------VTPEQVPTNI 362
RT +++++G VGKT L F EH E TI D + E + +
Sbjct: 99 RTFKVIIVGNAAVGKTCLSFRFCCGRFPEHT-----EATIGVDFRERSCVIENELLRVQL 153
Query: 363 IDICIPEQSLEQ-VAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVI 539
D E+ + VA + + V+ V +E+ N +A + + D P I
Sbjct: 154 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRI 213
Query: 540 LVGNKIDL 563
L+GNK D+
Sbjct: 214 LIGNKCDV 221
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 37.5 bits (83), Expect = 0.009
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK-----AEEITIPADVTPEQVPTNIIDICI 377
++L++G+PGVGKTS+I V F+ + A +I +P D V I DI
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKI-LPVDEN-TVVHLQIWDISG 70
Query: 378 PEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFV--RDNCPEDYRKPVILVGN 551
++ + AH IV R+ T+ A W + + + P IL+ N
Sbjct: 71 QDRYGVMTRVYYKDAHAAIIVLDSTRERTIEG-ALRWKTDLDQKVTLADGSPVPAILLAN 129
Query: 552 KIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMF 674
K D+ + D ++D+ V SAK + + E F
Sbjct: 130 KCDIDNKLGDDKLYDLETNNGFVG-SFRTSAKESVGIEEAF 169
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 37.5 bits (83), Expect = 0.009
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPK-----AEEITIPADVTPEQVPTNIIDICI 377
++L++G+PGVGKTS+I V F+ + A +I +P D V I DI
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKI-LPVDEN-TVVHLQIWDISG 70
Query: 378 PEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFV--RDNCPEDYRKPVILVGN 551
++ + AH IV R+ T+ A W + + + P IL+ N
Sbjct: 71 QDRYGVMTRVYYKDAHAAIIVLDSTRERTIEG-ALRWKTDLDQKVTLADGSPVPAILLAN 129
Query: 552 KIDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMF 674
K D+ + D ++D+ V SAK + + E F
Sbjct: 130 KCDIDNKLGDDKLYDLETNNGFVG-SFRTSAKESVGIEEAF 169
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 34.3 bits (75), Expect = 0.088
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEHVPPKA----EEITIPADVTPEQVPTNIIDICIP 380
+++L+G+ GVGK++L+ EF H+ K+ E T V + V I D
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEF--HLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQ 70
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E+ + A +V+ + + T + WL +RD+ D ++ VGNK D
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHVTYENVER-WLKELRDHA--DQNIVIMPVGNKCD 127
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 33.5 bits (73), Expect = 0.15
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Frame = +3
Query: 195 TVPR-TVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEI-------TIPADVTPEQ- 347
T P+ ++++LG+ GVGKTS+I + H P I + AD +
Sbjct: 47 TAPKHKAKVVVLGDSGVGKTSII---YRHRYGAHYRPVNATIGASFVSFDVGADYRDRED 103
Query: 348 -VPTNIIDICIPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDY 524
V + D E+ V + A IV+ V + T + + R + ED
Sbjct: 104 VVRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDA 163
Query: 525 RKPVILVGNKIDLID 569
V L+GNK DL++
Sbjct: 164 N--VYLIGNKTDLVE 176
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITIPA-DVTPEQVPTNIIDICIPEQ 386
++LL+G+ GVGKT ++ + F T + + I ++ +++ I D E+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 554
A I +V+ + ++ + IA WL + ++ ED K +++GNK
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHASEDVVK--MILGNK 123
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.36
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDICIPE 383
R +RILLLG GKT+++ L +E+ +HV P + + + N+ DI
Sbjct: 16 REIRILLLGLDNAGKTTILKQLSSED-VQHVTP-TKGFNVKTVAAMGDIRLNVWDIGGQR 73
Query: 384 QSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRK-PVILVGNKID 560
+ E + V + ++ +++ L + D E RK PV++ NK D
Sbjct: 74 SIRPYWSNYYENIDTLIFVIDSNDKKRFDEM-NIELGELLDE--EKLRKVPVLIFANKQD 130
Query: 561 LI 566
L+
Sbjct: 131 LV 132
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 31.9 bits (69), Expect = 0.47
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Frame = +3
Query: 207 TVRILLLGEPGVGKTSLILSLVTEEFTE-HVPPKAEEI-TIPADVTPEQVPTNIIDICIP 380
T +++L+G+ G GKT+ + +T EF + +V E+ + Q+ N+ D
Sbjct: 9 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQ 68
Query: 381 EQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNKID 560
E+ + I+F V + T + + RD P++L GNK+D
Sbjct: 69 EKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWH----RDLARVCENIPIVLCGNKVD 124
Query: 561 LIDYSV 578
+ D V
Sbjct: 125 VKDRKV 130
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 460 SCL-STENTMHITCALSISSATCSKDCSGIQISIILVGTCSGVTSAGIVISSAFGGTCSV 284
SC+ ST N+ I C S S CS + QI++I G T+ G SSA G TC +
Sbjct: 161 SCMQSTLNSAFICCRSSSSQRICSNN----QIALITNGALEMCTTPGTQCSSA-GYTCQL 215
Query: 283 N 281
+
Sbjct: 216 S 216
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTEH 293
++L++G+ GVGK+SL+L F+E+
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSEN 38
>AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical
protein F37B4.14 protein.
Length = 143
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 431 YYMCPFYLFSN-LFQRLFRNTNINNIGWNLFWRYISRYSYFFS 306
+Y+ P LFSN ++ + + NN+GWN+ ++FFS
Sbjct: 30 HYINPILLFSNNSYEHHHLSRSSNNVGWNILAILKLHITFFFS 72
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 192 ETVPRTVRILLLGE---PGVGKTSLILSLVTEEFTEHVPPKAEEITIPADVTPEQVPTNI 362
E +P V+ILL E P V K S L ++ + P+ ++ + V PE VP +
Sbjct: 64 EPIPELVQILLAAEPNKPSVPKRSNRKKLTYKQPPRNSTPQVPKVAVTLPV-PEPVPEPV 122
Query: 363 IDICIPEQSLEQVAEEI 413
+ +PE + E ++E +
Sbjct: 123 PE-PVPESTPEPISEPL 138
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEFTE 290
++LL+G+ GVGK+ L+L + +TE
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTE 38
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 29.9 bits (64), Expect = 1.9
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 5/168 (2%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLIL-----SLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDIC 374
++++LLG+ GKT L++ + + F V I + ++V I D
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLI--TMGDKKVKLQIWDTA 60
Query: 375 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 554
E+ A + +V+ + + + WL +++ E + V LVGNK
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENCRN-WLSQIKEYGKEAVQ--VTLVGNK 117
Query: 555 IDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
DL D +AE Y ++ +E SAK+ NV F + +L
Sbjct: 118 CDLPRAVPTDEGKRLAEAY-QIP-FMETSAKTGFNVDRAFLGLAERML 163
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 443 KYYAYYMCPFYLFSNLFQRLFRNTNINNIGWNLFWRYISRYSYFFSFW 300
+Y+ ++ F FSNL + F+NT + F+ S S FF+ W
Sbjct: 63 QYFKFFNEKFQFFSNLSNKKFKNTGKKPV----FFSNFSNKSIFFAVW 106
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 29.9 bits (64), Expect = 1.9
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 5/168 (2%)
Frame = +3
Query: 210 VRILLLGEPGVGKTSLIL-----SLVTEEFTEHVPPKAEEITIPADVTPEQVPTNIIDIC 374
++++LLG+ GKT L++ + + F V I + ++V I D
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLI--TMGDKKVKLQIWDTA 60
Query: 375 IPEQSLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 554
E+ A + +V+ + + + WL +++ E + V LVGNK
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENCRN-WLSQIKEYGKEAVQ--VTLVGNK 117
Query: 555 IDLIDYSVIDNIWDIAEEYPEVDRCIECSAKSLINVSEMFYNAQKAVL 698
DL D +AE Y ++ +E SAK+ NV F + +L
Sbjct: 118 CDLPRAVPTDEGKRLAEAY-QIP-FMETSAKTGFNVDRAFLGLAERML 163
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 534 VILVGNKIDLIDYSVIDNIWDIAEEYPEVDRC--IECSAKSLINVSEMF 674
+IL+GNKIDL +V+ + +V +C +E SA+ +N+SE++
Sbjct: 280 IILIGNKIDLKRNTVVSKMEGAC--LAKVHKCNFVEVSAQYSMNISELW 326
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 204 RTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 299
R +RIL+LG G GKT+++ L E +P
Sbjct: 15 REMRILILGLDGAGKTTILYRLQVGEVVTTIP 46
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/116 (18%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 213 RILLLGEPGVGKTSLILSLVTEEF-TEHVPPKAEEITI-PADVTPEQVPTNIIDICIPEQ 386
++LL+G+ GVGKT ++ + F + + I ++ +++ I D E+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 387 SLEQVAEEIERAHVICIVFSVDRQETLNKIATYWLPFVRDNCPEDYRKPVILVGNK 554
A I +V+ + + + I W+ + ++ D + +++GNK
Sbjct: 70 FRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAASDVER--MIIGNK 122
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 180 KMVYETVPRTVRILLLGEPGVGKTSLILSLVTEEFTEHVP 299
KM+ E +L+ GEPG GKT++ ++ +++E E P
Sbjct: 57 KMIQEGKIAGRALLVTGEPGAGKTAIAIA-ISKELGEDTP 95
>Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical
protein JC8.7 protein.
Length = 333
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 495 FVRDNCPEDYRKPVILVGNKIDLIDYSVIDNI--WDIAEEYPEVDRCIECSAKS 650
F RD P D +KPVI+ + + D SV+ N I + +CI+CSAKS
Sbjct: 113 FWRDK-PND-KKPVIVFMDLKTIPDLSVVGNEIRHAILDFCTRCSKCIDCSAKS 164
>Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical
protein F41D3.4 protein.
Length = 669
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -2
Query: 273 SLTIK*VMFYQLLARLEEVYVRFEVQFHKPFCSFILETSYVYYLFS*AVV 124
SL+++ V FY L+ + + + + H P+ + I SY+++ FS A V
Sbjct: 142 SLSVE-VQFYVLVPSMYLIGTKLPAKLHNPYYTIIGLASYLFFHFSPAPV 190
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 219 LLLGEPGVGKTSLILSLVTEEFTEHVPPKAEEITIP 326
L++GE GVGK+SL+L V + P +A I +P
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVD---PERAVSIGVP 33
>U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical
protein ZK546.5 protein.
Length = 646
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 291 HVPPKAEEITIPADVTPEQVPTNIIDICIPEQSLEQVAEE 410
H+P + EE+ + + P +P+ IP++ + AE+
Sbjct: 455 HIPTQHEEVVVESSEDPNDIPST-SQAMIPDEDANEAAEQ 493
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 525 RKPVILVGNKIDLIDYSVIDNIWDIAE 605
RKPVI V NKID +D + NI +A+
Sbjct: 293 RKPVICVLNKIDALDENEKTNISSLAK 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,997,274
Number of Sequences: 27780
Number of extensions: 305101
Number of successful extensions: 1296
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -