Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6h01
         (658 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118885-1|AAM50745.1|  186|Drosophila melanogaster HL07956p pro...   182   5e-46
AF017783-4|AAD28638.1|  186|Drosophila melanogaster unknown prot...   182   5e-46
AE013599-1579|AAF58460.1|  186|Drosophila melanogaster CG12373-P...   182   5e-46
AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p pro...    36   0.037
AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA...    36   0.037

>AY118885-1|AAM50745.1|  186|Drosophila melanogaster HL07956p
           protein.
          Length = 186

 Score =  182 bits (442), Expect = 5e-46
 Identities = 79/154 (51%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = +1

Query: 124 ANVEFV-NRNPRNLERMRIARKPDGYHLEKPGRKYWHKLVLTPGNRSIIAKVIHFLNGPV 300
           A+ E+V NRNPRNLER+RIA KP GYHLEKPGR YWH L +    R +   V HF NG +
Sbjct: 25  ASTEYVINRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEINTSGRYVSGDVKHFENGTI 84

Query: 301 VEVKTSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEMYCDLEPQQGGKAEKFLEE 480
           +   TSEWA+++QLY   DT A+++LG+VLAQRC++ GITEM C++E   G K +K L+ 
Sbjct: 85  LSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQSGITEMTCNVEAVPGSKLQKLLQT 144

Query: 481 VVKGGITLQEPEVYKKPNPWDQFRPEKPWEVHDE 582
           +   G++ +EP       PWD+ R EKPWEV ++
Sbjct: 145 IQDNGVSFKEPSRLPNEQPWDEKRHEKPWEVSED 178


>AF017783-4|AAD28638.1|  186|Drosophila melanogaster unknown
           protein.
          Length = 186

 Score =  182 bits (442), Expect = 5e-46
 Identities = 79/154 (51%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = +1

Query: 124 ANVEFV-NRNPRNLERMRIARKPDGYHLEKPGRKYWHKLVLTPGNRSIIAKVIHFLNGPV 300
           A+ E+V NRNPRNLER+RIA KP GYHLEKPGR YWH L +    R +   V HF NG +
Sbjct: 25  ASTEYVINRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEINTSGRYVSGDVKHFENGTI 84

Query: 301 VEVKTSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEMYCDLEPQQGGKAEKFLEE 480
           +   TSEWA+++QLY   DT A+++LG+VLAQRC++ GITEM C++E   G K +K L+ 
Sbjct: 85  LSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQSGITEMTCNVEAVPGSKLQKLLQT 144

Query: 481 VVKGGITLQEPEVYKKPNPWDQFRPEKPWEVHDE 582
           +   G++ +EP       PWD+ R EKPWEV ++
Sbjct: 145 IQDNGVSFKEPSRLPNEQPWDEKRHEKPWEVSED 178


>AE013599-1579|AAF58460.1|  186|Drosophila melanogaster CG12373-PA
           protein.
          Length = 186

 Score =  182 bits (442), Expect = 5e-46
 Identities = 79/154 (51%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
 Frame = +1

Query: 124 ANVEFV-NRNPRNLERMRIARKPDGYHLEKPGRKYWHKLVLTPGNRSIIAKVIHFLNGPV 300
           A+ E+V NRNPRNLER+RIA KP GYHLEKPGR YWH L +    R +   V HF NG +
Sbjct: 25  ASTEYVINRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEINTSGRYVSGDVKHFENGTI 84

Query: 301 VEVKTSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEMYCDLEPQQGGKAEKFLEE 480
           +   TSEWA+++QLY   DT A+++LG+VLAQRC++ GITEM C++E   G K +K L+ 
Sbjct: 85  LSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQSGITEMTCNVEAVPGSKLQKLLQT 144

Query: 481 VVKGGITLQEPEVYKKPNPWDQFRPEKPWEVHDE 582
           +   G++ +EP       PWD+ R EKPWEV ++
Sbjct: 145 IQDNGVSFKEPSRLPNEQPWDEKRHEKPWEVSED 178


>AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p
           protein.
          Length = 687

 Score = 36.3 bits (80), Expect = 0.037
 Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 2/154 (1%)
 Frame = +1

Query: 76  IRTVPFVPQMTRLSSTANVEFVNRNPRNLERMRIARKPDG--YHLEKPGRKYWHKLVLTP 249
           + T+  VP  T+L   A  E  N   + L RM  AR+ D   Y +     +  H  V   
Sbjct: 511 LTTLQHVPCCTQLDEDAWEEISNFR-KALTRMFAARRQDVVFYEIANKLHRRPHLSVHCI 569

Query: 250 GNRSIIAKVIHFLNGPVVEVKTSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEMY 429
              +   ++  F     +E    EW + KQL S        ++ K L    + FG+   +
Sbjct: 570 PIPASQGEMAPFYFKKAIEESEQEWCINKQLVSLRQKSLRAAIPKGLPYVWVHFGMDSGF 629

Query: 430 CDLEPQQGGKAEKFLEEVVKGGITLQEPEVYKKP 531
             +   +      F +E++ GG+    P  ++KP
Sbjct: 630 AHVIEDEDRFPANFAQEIL-GGMLELNPNAWRKP 662


>AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA
           protein.
          Length = 687

 Score = 36.3 bits (80), Expect = 0.037
 Identities = 36/154 (23%), Positives = 61/154 (39%), Gaps = 2/154 (1%)
 Frame = +1

Query: 76  IRTVPFVPQMTRLSSTANVEFVNRNPRNLERMRIARKPDG--YHLEKPGRKYWHKLVLTP 249
           + T+  VP  T+L   A  E  N   + L RM  AR+ D   Y +     +  H  V   
Sbjct: 511 LTTLQHVPCCTQLDEDAWEEISNFR-KALTRMFAARRQDVVFYEIANKLHRRPHLSVHCI 569

Query: 250 GNRSIIAKVIHFLNGPVVEVKTSEWALQKQLYSPTDTCAYISLGKVLAQRCIEFGITEMY 429
              +   ++  F     +E    EW + KQL S        ++ K L    + FG+   +
Sbjct: 570 PIPASQGEMAPFYFKKAIEESEQEWCINKQLVSLRQKSLRAAIPKGLPYVWVHFGMDSGF 629

Query: 430 CDLEPQQGGKAEKFLEEVVKGGITLQEPEVYKKP 531
             +   +      F +E++ GG+    P  ++KP
Sbjct: 630 AHVIEDEDRFPANFAQEIL-GGMLELNPNAWRKP 662


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,572,557
Number of Sequences: 53049
Number of extensions: 611076
Number of successful extensions: 1574
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)