Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6g02
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X76228-1|CAA53814.1| 226|Homo sapiens vacuolar H+ ATPase E subu... 162 1e-39
X71491-1|CAA50592.1| 226|Homo sapiens vacuolar proton ATPase pr... 162 1e-39
CR456385-1|CAG30271.1| 226|Homo sapiens ATP6E protein. 162 1e-39
BT007128-1|AAP35792.1| 226|Homo sapiens ATPase, H+ transporting... 162 1e-39
BC004443-1|AAH04443.1| 226|Homo sapiens ATPase, H+ transporting... 162 1e-39
BC034808-1|AAH34808.1| 226|Homo sapiens ATPase, H+ transporting... 144 3e-34
BC008981-1|AAH08981.1| 226|Homo sapiens ATPase, H+ transporting... 144 3e-34
AK058055-1|BAB71643.1| 226|Homo sapiens protein ( Homo sapiens ... 144 3e-34
AC018682-1|AAY14833.1| 226|Homo sapiens unknown protein. 144 3e-34
AB074759-1|BAC00847.1| 226|Homo sapiens V-ATPase E1 subunit pro... 144 3e-34
BC112028-1|AAI12029.1| 259|Homo sapiens hypothetical protein FL... 36 0.14
BC112026-1|AAI12027.1| 259|Homo sapiens hypothetical protein LO... 36 0.14
AK097823-1|BAC05178.1| 259|Homo sapiens protein ( Homo sapiens ... 36 0.14
U68162-2|AAB08425.1| 628|Homo sapiens thrombopoietin receptor p... 30 6.8
U68162-1|AAB08424.1| 635|Homo sapiens thrombopoietin receptor p... 30 6.8
M90102-1|AAA69971.1| 635|Homo sapiens c-myeloproliferative leuk... 30 6.8
DQ234353-1|ABB29982.1| 628|Homo sapiens myeloproliferative leuk... 30 6.8
AL139289-2|CAI23380.1| 635|Homo sapiens myeloproliferative leuk... 30 6.8
AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha... 30 8.9
>X76228-1|CAA53814.1| 226|Homo sapiens vacuolar H+ ATPase E subunit
protein.
Length = 226
Score = 162 bits (393), Expect = 1e-39
Identities = 86/181 (47%), Positives = 115/181 (63%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L+QL+EP + +R R+ D LV++ + KA Y K DV +++D E++L D GG+E
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVE 182
Query: 682 L 684
+
Sbjct: 183 I 183
>X71491-1|CAA50592.1| 226|Homo sapiens vacuolar proton ATPase
protein.
Length = 226
Score = 162 bits (393), Expect = 1e-39
Identities = 86/181 (47%), Positives = 115/181 (63%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDRKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L+QL+EP + +R R+ D LV++ + KA Y K DV +++D E++L D GG+E
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVE 182
Query: 682 L 684
+
Sbjct: 183 I 183
>CR456385-1|CAG30271.1| 226|Homo sapiens ATP6E protein.
Length = 226
Score = 162 bits (393), Expect = 1e-39
Identities = 86/181 (47%), Positives = 115/181 (63%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L+QL+EP + +R R+ D LV++ + KA Y K DV +++D E++L D GG+E
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVE 182
Query: 682 L 684
+
Sbjct: 183 I 183
>BT007128-1|AAP35792.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E isoform 1 protein.
Length = 226
Score = 162 bits (393), Expect = 1e-39
Identities = 86/181 (47%), Positives = 115/181 (63%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L+QL+EP + +R R+ D LV++ + KA Y K DV +++D E++L D GG+E
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVE 182
Query: 682 L 684
+
Sbjct: 183 I 183
>BC004443-1|AAH04443.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E1 protein.
Length = 226
Score = 162 bits (393), Expect = 1e-39
Identities = 86/181 (47%), Positives = 115/181 (63%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSDADVQKQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT Y LL L++Q
Sbjct: 63 QIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L+QL+EP + +R R+ D LV++ + KA Y K DV +++D E++L D GG+E
Sbjct: 123 GLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVE 182
Query: 682 L 684
+
Sbjct: 183 I 183
>BC034808-1|AAH34808.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E2 protein.
Length = 226
Score = 144 bits (349), Expect = 3e-34
Identities = 78/181 (43%), Positives = 107/181 (59%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L +L+EP + +R R D LVE+ + KA +Y +K V +++D E +L+ + GG+E
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVE 182
Query: 682 L 684
+
Sbjct: 183 V 183
>BC008981-1|AAH08981.1| 226|Homo sapiens ATPase, H+ transporting,
lysosomal 31kDa, V1 subunit E2 protein.
Length = 226
Score = 144 bits (349), Expect = 3e-34
Identities = 78/181 (43%), Positives = 107/181 (59%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L +L+EP + +R R D LVE+ + KA +Y +K V +++D E +L+ + GG+E
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVE 182
Query: 682 L 684
+
Sbjct: 183 V 183
>AK058055-1|BAB71643.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ25326 fis, clone TST00424. ).
Length = 226
Score = 144 bits (349), Expect = 3e-34
Identities = 78/181 (43%), Positives = 107/181 (59%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L +L+EP + +R R D LVE+ + KA +Y +K V +++D E +L+ + GG+E
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVE 182
Query: 682 L 684
+
Sbjct: 183 V 183
>AC018682-1|AAY14833.1| 226|Homo sapiens unknown protein.
Length = 226
Score = 144 bits (349), Expect = 3e-34
Identities = 78/181 (43%), Positives = 107/181 (59%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L +L+EP + +R R D LVE+ + KA +Y +K V +++D E +L+ + GG+E
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVE 182
Query: 682 L 684
+
Sbjct: 183 V 183
>AB074759-1|BAC00847.1| 226|Homo sapiens V-ATPase E1 subunit
protein.
Length = 226
Score = 144 bits (349), Expect = 3e-34
Identities = 78/181 (43%), Positives = 107/181 (59%)
Frame = +1
Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
LSD DV+KQIKHMMAFIEQ FNIEKGRLVQ QRLKIM
Sbjct: 3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEK 62
Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
I S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y LL L++Q
Sbjct: 63 QIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQ 122
Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
L +L+EP + +R R D LVE+ + KA +Y +K V +++D E +L+ + GG+E
Sbjct: 123 GLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVE 182
Query: 682 L 684
+
Sbjct: 183 V 183
>BC112028-1|AAI12029.1| 259|Homo sapiens hypothetical protein
FLJ40504 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.14
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = -1
Query: 484 PAALSTVW------CPLALQPGACELHQVHYVRDLHALSVPSDELGS-ACSKIGSS 338
P+AL+ W CPLAL PG ELH H + LH L VP G+ C+++ SS
Sbjct: 15 PSALTKNWPSKPESCPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68
>BC112026-1|AAI12027.1| 259|Homo sapiens hypothetical protein
LOC284085 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.14
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = -1
Query: 484 PAALSTVW------CPLALQPGACELHQVHYVRDLHALSVPSDELGS-ACSKIGSS 338
P+AL+ W CPLAL PG ELH H + LH L VP G+ C+++ SS
Sbjct: 15 PSALTKNWPSKPESCPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68
>AK097823-1|BAC05178.1| 259|Homo sapiens protein ( Homo sapiens
cDNA FLJ40504 fis, clone TESTI2045509, highly similar to
KERATIN, TYPE I CYTOSKELETAL 18. ).
Length = 259
Score = 35.9 bits (79), Expect = 0.14
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Frame = -1
Query: 484 PAALSTVW------CPLALQPGACELHQVHYVRDLHALSVPSDELGS-ACSKIGSS 338
P+AL+ W CPLAL PG ELH H + LH L VP G+ C+++ SS
Sbjct: 15 PSALTKNWPSKPESCPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68
>U68162-2|AAB08425.1| 628|Homo sapiens thrombopoietin receptor
protein.
Length = 628
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 451 ALQPGACELHQV--HYVRDLHALSVPSDELGSACSKIGSS-SEVQPASPSFHSIP 296
AL P +LH+V Y+RD ALS P + C ++ S E+ P S +P
Sbjct: 520 ALWPSLPDLHRVLGQYLRDTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPLP 574
>U68162-1|AAB08424.1| 635|Homo sapiens thrombopoietin receptor
protein.
Length = 635
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 451 ALQPGACELHQV--HYVRDLHALSVPSDELGSACSKIGSS-SEVQPASPSFHSIP 296
AL P +LH+V Y+RD ALS P + C ++ S E+ P S +P
Sbjct: 527 ALWPSLPDLHRVLGQYLRDTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPLP 581
>M90102-1|AAA69971.1| 635|Homo sapiens c-myeloproliferative
leukemia virus type P protein.
Length = 635
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 451 ALQPGACELHQV--HYVRDLHALSVPSDELGSACSKIGSS-SEVQPASPSFHSIP 296
AL P +LH+V Y+RD ALS P + C ++ S E+ P S +P
Sbjct: 527 ALWPSLPDLHRVLGQYLRDTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPLP 581
>DQ234353-1|ABB29982.1| 628|Homo sapiens myeloproliferative
leukemia virus oncogene protein.
Length = 628
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 451 ALQPGACELHQV--HYVRDLHALSVPSDELGSACSKIGSS-SEVQPASPSFHSIP 296
AL P +LH+V Y+RD ALS P + C ++ S E+ P S +P
Sbjct: 520 ALWPSLPDLHRVLGQYLRDTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPLP 574
>AL139289-2|CAI23380.1| 635|Homo sapiens myeloproliferative
leukemia virus oncogene protein.
Length = 635
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 451 ALQPGACELHQV--HYVRDLHALSVPSDELGSACSKIGSS-SEVQPASPSFHSIP 296
AL P +LH+V Y+RD ALS P + C ++ S E+ P S +P
Sbjct: 527 ALWPSLPDLHRVLGQYLRDTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPLP 581
>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
dynein type 11 protein.
Length = 4523
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 406 VRNVLDEARKRLAEVPK-DT-KLYSELLVTLIVQALFQLMEPTVTIRVRQTDKALVESLL 579
+ N+++E RK P DT K+Y E + ++V+ FQ + + ++ T+K L +
Sbjct: 884 IHNLVEENRKLFKANPSLDTWKIYVEFIDDIVVEGFFQAIMHDLDFFLKNTEKQLKPAPF 943
Query: 580 GKAQ 591
+AQ
Sbjct: 944 FQAQ 947
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,344,744
Number of Sequences: 237096
Number of extensions: 1771075
Number of successful extensions: 4580
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4570
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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