Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6g02
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U38951-1|AAB09739.1|  226|Drosophila melanogaster vacuolar ATPas...   197   1e-50
U38198-1|AAB09738.1|  226|Drosophila melanogaster V-ATPase subun...   197   1e-50
AF145618-1|AAD38593.1|  226|Drosophila melanogaster BcDNA.GH0368...   197   1e-50
AE014297-290|AAF51997.1|  226|Drosophila melanogaster CG1088-PB,...   197   1e-50
AE014297-289|AAF51998.1|  226|Drosophila melanogaster CG1088-PA,...   197   1e-50
AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    31   1.9  
D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.         30   3.4  
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro...    30   3.4  
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,...    30   3.4  
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,...    30   3.4  

>U38951-1|AAB09739.1|  226|Drosophila melanogaster vacuolar ATPase
           subunit E protein.
          Length = 226

 Score =  197 bits (481), Expect = 1e-50
 Identities = 105/183 (57%), Positives = 123/183 (67%)
 Frame = +1

Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
           LSDADVQKQIKHMMAFIEQ                FNIEKGRLVQQQRLKIM        
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEK 62

Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
                  IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ
Sbjct: 63  QVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQ 122

Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
            LFQ+MEP V +R R+ D  LV ++L  A + Y  +I ++V L +D ++FLS DTCGG+E
Sbjct: 123 GLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVE 182

Query: 682 LVA 690
           L+A
Sbjct: 183 LLA 185


>U38198-1|AAB09738.1|  226|Drosophila melanogaster V-ATPase subunit
           E protein.
          Length = 226

 Score =  197 bits (481), Expect = 1e-50
 Identities = 105/183 (57%), Positives = 123/183 (67%)
 Frame = +1

Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
           LSDADVQKQIKHMMAFIEQ                FNIEKGRLVQQQRLKIM        
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEK 62

Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
                  IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ
Sbjct: 63  QVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQ 122

Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
            LFQ+MEP V +R R+ D  LV ++L  A + Y  +I ++V L +D ++FLS DTCGG+E
Sbjct: 123 GLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVE 182

Query: 682 LVA 690
           L+A
Sbjct: 183 LLA 185


>AF145618-1|AAD38593.1|  226|Drosophila melanogaster BcDNA.GH03683
           protein.
          Length = 226

 Score =  197 bits (481), Expect = 1e-50
 Identities = 105/183 (57%), Positives = 123/183 (67%)
 Frame = +1

Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
           LSDADVQKQIKHMMAFIEQ                FNIEKGRLVQQQRLKIM        
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEK 62

Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
                  IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ
Sbjct: 63  QVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQ 122

Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
            LFQ+MEP V +R R+ D  LV ++L  A + Y  +I ++V L +D ++FLS DTCGG+E
Sbjct: 123 GLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVE 182

Query: 682 LVA 690
           L+A
Sbjct: 183 LLA 185


>AE014297-290|AAF51997.1|  226|Drosophila melanogaster CG1088-PB,
           isoform B protein.
          Length = 226

 Score =  197 bits (481), Expect = 1e-50
 Identities = 105/183 (57%), Positives = 123/183 (67%)
 Frame = +1

Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
           LSDADVQKQIKHMMAFIEQ                FNIEKGRLVQQQRLKIM        
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEK 62

Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
                  IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ
Sbjct: 63  QVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQ 122

Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
            LFQ+MEP V +R R+ D  LV ++L  A + Y  +I ++V L +D ++FLS DTCGG+E
Sbjct: 123 GLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVE 182

Query: 682 LVA 690
           L+A
Sbjct: 183 LLA 185


>AE014297-289|AAF51998.1|  226|Drosophila melanogaster CG1088-PA,
           isoform A protein.
          Length = 226

 Score =  197 bits (481), Expect = 1e-50
 Identities = 105/183 (57%), Positives = 123/183 (67%)
 Frame = +1

Query: 142 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 321
           LSDADVQKQIKHMMAFIEQ                FNIEKGRLVQQQRLKIM        
Sbjct: 3   LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEK 62

Query: 322 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 501
                  IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ
Sbjct: 63  QVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQ 122

Query: 502 ALFQLMEPTVTIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTENFLSPDTCGGIE 681
            LFQ+MEP V +R R+ D  LV ++L  A + Y  +I ++V L +D ++FLS DTCGG+E
Sbjct: 123 GLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVE 182

Query: 682 LVA 690
           L+A
Sbjct: 183 LLA 185


>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 516 HGTHCHHPRPSNRQGSGGVPARKSSTRLXE*DQEGRCVESRH 641
           H  H  H R S RQGSG +P     +      +   C   RH
Sbjct: 178 HSHHSRHSRRSRRQGSGSLPGAHQGSANHSVMRPSICTSRRH 219


>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
          Length = 1893

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 367  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 531
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1428 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1487

Query: 532  TIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTE 645
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1488 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1525


>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p protein.
          Length = 2051

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 367  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 531
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1586 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1645

Query: 532  TIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTE 645
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1646 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1683


>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
            isoform A protein.
          Length = 2051

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 367  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 531
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1586 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1645

Query: 532  TIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTE 645
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1646 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1683


>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
            isoform B protein.
          Length = 1882

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +1

Query: 367  QARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQALF-----QLMEPTV 531
            + R K L++R +H+R   ++    L+++   + +  E L TLI++  F     +L E   
Sbjct: 1417 EEREKDLEMRREHIRQWREQQISELSQIVSRSPMQEEQLKTLILERDFERRAQELQEQEE 1476

Query: 532  TIRVRQTDKALVESLLGKAQQDYXNKIKKDVVLKVDTE 645
              + +Q DK  V+ L   A     + I+  +     TE
Sbjct: 1477 QDQEQQYDKENVQELFRLAGGGQVSAIQTPITSYRQTE 1514


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,675,508
Number of Sequences: 53049
Number of extensions: 552048
Number of successful extensions: 1532
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)