Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6f15
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.6  
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         23   6.2  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   8.2  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   8.2  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 250 RRLLLCGADCGLHYQFNG 303
           RRLLL   D G HY  +G
Sbjct: 299 RRLLLFSTDAGFHYAGDG 316


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 11  PRQRGGGRICLCLCEVKSIL 70
           P   G G +C+C+C   S+L
Sbjct: 50  PYLSGSGTLCVCVCVDVSVL 69


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 505 YKPLNGLNCNTEAKSHQEYCVHESAQNFSTSPAESV 398
           Y PL+  NC  E +S+  Y V +    + ++P   V
Sbjct: 148 YYPLDSQNCTVEIESY-GYTVSDVVMYWRSTPIRGV 182


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 640 RWWNSTVRVTVSAVI 596
           RWWN+T  + V A++
Sbjct: 77  RWWNNTCGLQVPAIM 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,618
Number of Sequences: 2352
Number of extensions: 14247
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)