Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6f01
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    29   0.18 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.2  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   2.9  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.9  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   3.8  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   8.8  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   8.8  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = +1

Query: 214 INSLFL---TLRWELWISWWGCQMIWASLTL 297
           +N +FL   T RW  ++ +  C MIW SL L
Sbjct: 272 LNCVFLLETTFRWVFFVQFIQCTMIWCSLIL 302


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 458 SAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLG-RSSQEGALH 634
           S E  ++H+QT +   +  + Q  +    Q++ +Q +++  +     Q G  SSQ    H
Sbjct: 224 SPEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQRQPSSQQGDSSSQRRVRH 283

Query: 635 LGQR 646
            G+R
Sbjct: 284 AGRR 287


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 449  KAESAEYRRHHKQTGRTDRRGSEG 520
            +A  A  R+ H+Q  + +RRG EG
Sbjct: 1091 RARMARLRQRHRQHQQDERRGVEG 1114


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 500 DRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGRSSQE 622
           +RRG +G   + QR Q++  Q RE+  ++    Q  +  Q+
Sbjct: 210 NRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQ 250


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -3

Query: 200 VA*FGGIVQGIPSLLTGLVARGTDH 126
           VA  G I+  I   LTGLV R TDH
Sbjct: 447 VALGGTIIGVIWGFLTGLVTRFTDH 471


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/18 (61%), Positives = 15/18 (83%), Gaps = 1/18 (5%)
 Frame = +3

Query: 231 DLKVGTLDQLVG-LSDDL 281
           +L +GTLDQL G L+D+L
Sbjct: 309 ELDIGTLDQLAGSLADEL 326


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -3

Query: 428 PLEASQISGEVTVIGHQVFMELIALI 351
           P+E  Q +G++  + +Q+F+  + +I
Sbjct: 143 PIEVIQTNGDIPPLTYQMFLHTVNII 168


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 202 SVSTINSLFLTLRWELWISWWGCQMIWASLTL 297
           ++  +  L +  RW     +  C MIW SL L
Sbjct: 252 ALKCVELLEIIFRWVFLGQFIQCVMIWCSLVL 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,788
Number of Sequences: 2352
Number of extensions: 14863
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)