Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6e21
         (582 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   391   e-109
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   391   e-109
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   390   e-109
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   390   e-109
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   178   5e-45
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   6.1  
BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p pro...    28   8.0  
AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p pro...    28   8.0  
AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA ...    28   8.0  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  391 bits (962), Expect = e-109
 Identities = 176/189 (93%), Positives = 186/189 (98%)
 Frame = +1

Query: 16  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 195
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 196 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 375
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 376 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 555
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 556 DEFEKLREE 582
           + +E+LR++
Sbjct: 192 ERYEELRDD 200


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  391 bits (962), Expect = e-109
 Identities = 176/189 (93%), Positives = 186/189 (98%)
 Frame = +1

Query: 16  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 195
           + MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYE
Sbjct: 18  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 77

Query: 196 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 375
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 78  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 137

Query: 376 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 555
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 138 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 197

Query: 556 DEFEKLREE 582
           + +E+LR++
Sbjct: 198 ERYEELRDD 206


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  390 bits (960), Expect = e-109
 Identities = 176/187 (94%), Positives = 185/187 (98%)
 Frame = +1

Query: 22  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 201
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 202 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 381
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 382 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 561
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 562 FEKLREE 582
           +E+LR++
Sbjct: 181 YEELRDD 187


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  390 bits (960), Expect = e-109
 Identities = 176/187 (94%), Positives = 185/187 (98%)
 Frame = +1

Query: 22  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 201
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 202 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 381
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 382 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 561
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 562 FEKLREE 582
           +E+LR++
Sbjct: 181 YEELRDD 187


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  178 bits (433), Expect = 5e-45
 Identities = 108/191 (56%), Positives = 124/191 (64%), Gaps = 2/191 (1%)
 Frame = +1

Query: 16  ITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYE 195
           + MGRRPARCYRY           C+  P PK R F  G     +  F L          
Sbjct: 5   VEMGRRPARCYRY-----------CKNKPYPKSR-FCRGVPDPKIRIFDL---------- 42

Query: 196 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRI--NKMLSCAGADRLQTGMR 369
                 +E   +C   +LV     D++  ++        RI  NKMLSCAGADRLQTGMR
Sbjct: 43  GRKKATVEDFPLCV--HLVS----DEYE-QLSSEALEAGRICCNKMLSCAGADRLQTGMR 95

Query: 370 GAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 549
           GAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY
Sbjct: 96  GAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKY 155

Query: 550 ERDEFEKLREE 582
           ER+ +E+LR++
Sbjct: 156 ERERYEELRDD 166


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -3

Query: 220 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 80
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


>BT011380-1|AAR96172.1| 1233|Drosophila melanogaster LP07472p protein.
          Length = 1233

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 4    HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 99
            H++ I  G R A CY   + + +P SR  R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


>AY047535-1|AAK77267.1|  640|Drosophila melanogaster GH04440p
           protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 4   HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 99
           H++ I  G R A CY   + + +P SR  R V
Sbjct: 519 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 550


>AE013599-782|AAF58990.2| 1233|Drosophila melanogaster CG8777-PA
            protein.
          Length = 1233

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 4    HFVKITMGRRPARCYRYCKNKPYPKSRFCRGV 99
            H++ I  G R A CY   + + +P SR  R V
Sbjct: 1112 HYILINEGARRALCYLQTRIRMFPNSRSLRSV 1143


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,873,453
Number of Sequences: 53049
Number of extensions: 689093
Number of successful extensions: 2227
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)