Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6e08
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 101 3e-22
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 73 1e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 73 1e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 1e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 1e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 1e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 72 3e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 72 3e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 72 3e-13
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 8e-10
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 1e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 1e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 1e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 1e-04
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.001
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.001
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.001
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.001
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 40 0.001
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 40 0.001
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 40 0.001
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.007
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.007
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.009
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 37 0.012
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.027
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.047
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 34 0.063
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.063
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.063
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 34 0.063
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.33
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.0
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 30 1.0
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 30 1.3
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 1.3
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.3
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 1.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 1.8
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 1.8
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 1.8
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 1.8
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 2.4
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 2.4
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.1
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.1
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 3.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.1
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 4.1
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 4.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 5.4
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 28 5.4
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 7.2
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 27 7.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 7.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 7.2
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 27 9.5
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical p... 27 9.5
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 27 9.5
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 9.5
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 9.5
U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily ass... 27 9.5
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 9.5
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 9.5
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 9.5
AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical... 27 9.5
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 101 bits (243), Expect = 3e-22
Identities = 58/159 (36%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Frame = +1
Query: 76 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD---- 243
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 244 --------RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNC 399
CY C G GH +R+C PS + +G E GR Q CYNC
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYNC 112
Query: 400 NKSGHISRNCPDG----TKTCYVCGKPGHISRECDEARN 504
+SGHISR C + K CY C + GHISR+C N
Sbjct: 113 GRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 81.4 bits (192), Expect = 4e-16
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 37/132 (28%)
Frame = +1
Query: 238 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 384
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 385 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 486
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 487 CDEARN*PQPPC 522
C E+ + + C
Sbjct: 122 CTESGSAEEKRC 133
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 55 RSNRNIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE 234
R + CY C R+GH +RECT+ G + + ++C++C TGH +RDC
Sbjct: 97 RGGEGRSFGGQKCYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPS 148
Query: 235 EAD 243
+ +
Sbjct: 149 QTN 151
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 261
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 262 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 432
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 433 DGTK 444
K
Sbjct: 682 TRPK 685
Score = 64.5 bits (150), Expect = 5e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +1
Query: 187 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 351
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 352 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 489
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 2e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +1
Query: 199 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 372
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 373 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 522
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 47.6 bits (108), Expect = 6e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 252
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 253 RCNGTGHIARECAQSPDE 306
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 448 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 540
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 261
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 262 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCP 432
GH A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 433 DGTK 444
K
Sbjct: 682 TRPK 685
Score = 64.5 bits (150), Expect = 5e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +1
Query: 187 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 351
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 352 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 489
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 2e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = +1
Query: 199 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 372
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 373 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 522
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 47.6 bits (108), Expect = 6e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CY 252
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 253 RCNGTGHIARECAQSPDE 306
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 448 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 540
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 1e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +1
Query: 163 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 321
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 322 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 471
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 472 HISREC 489
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 267
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 268 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 399
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 400 NKSGHISRNCPDGTK 444
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 361 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 8e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 186
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 187 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 309
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 448 CYVCGKPGHISRECDEARN*PQP 516
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 1e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +1
Query: 163 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 321
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 322 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 471
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 472 HISREC 489
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 267
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 268 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 399
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 400 NKSGHISRNCPDGTK 444
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 361 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 8e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 186
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 187 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 309
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 448 CYVCGKPGHISRECDEARN*PQP 516
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.9 bits (171), Expect = 1e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = +1
Query: 163 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 321
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 322 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 471
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 472 HISREC 489
H S EC
Sbjct: 272 HRSNEC 277
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 267
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 268 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNC 399
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 400 NKSGHISRNCPDGTK 444
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 361 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 47.2 bits (107), Expect = 8e-06
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 27/101 (26%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQ-------------GGV----------VSRDSGFNRQRE----K 186
VCY C + GH +RECT+ GG D GF E K
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMK 243
Query: 187 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 309
CF C GH + +C E C+ C GH + EC +P +P
Sbjct: 244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 448 CYVCGKPGHISRECDEARN*PQP 516
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 3e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 318
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 319 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 489
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 237
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 238 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATQTCYNCN 402
+ + N G + Q E +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 403 KSGHISRNCPDGTK 444
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 252
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 253 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 357
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 3e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 444
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 4e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 264
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 265 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 384
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 385 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 267
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 268 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 405
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 406 SGHISRNCPDGTK 444
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +1
Query: 205 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 360
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 361 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 495
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 367 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 205 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 375
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 376 ATQTCYNCNKSG 411
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 294
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 406 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 516
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 71.7 bits (168), Expect = 3e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 318
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 319 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 489
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 237
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 238 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATQTCYNCN 402
+ + N G + Q E +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 403 KSGHISRNCPDGTK 444
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 252
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 253 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 357
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 3e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 444
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 4e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 264
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 265 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 384
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 385 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 267
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 268 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 405
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 406 SGHISRNCPDGTK 444
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +1
Query: 205 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 360
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 361 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 495
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 367 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 205 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 375
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 376 ATQTCYNCNKSG 411
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 294
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 406 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 516
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 3e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 318
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 319 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 489
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQ--------GGVVSRDSGF--NRQREKCFKCNRTGHFARDCKEE 237
VCY C + GH +R+C + G SGF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 238 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRESATQTCYNCN 402
+ + N G + Q E +C+NC + GH + +CPE +E + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 403 KSGHISRNCPDGTK 444
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 88 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCY 252
VCY C + GH +R+C + G SGF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 253 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 357
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.4 bits (135), Expect = 3e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 444
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 58.0 bits (134), Expect = 4e-09
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 264
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 265 -------------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQ 384
TG + + S + G + GG R
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 385 TCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 267
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 268 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNK 405
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 406 SGHISRNCPDGTK 444
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +1
Query: 205 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 360
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 361 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 495
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +1
Query: 367 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 501
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 205 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 375
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 376 ATQTCYNCNKSG 411
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 294
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 406 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 516
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 8e-10
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = +1
Query: 139 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 309
G V D+ +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 310 SCYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC--------PDGTKTCYVCG 462
C+ C H C + G + TC+ C + GHISR+C PDG C VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCG 313
Query: 463 KPGHISRECDE 495
H+ R+C E
Sbjct: 314 ANTHLRRDCPE 324
Score = 60.5 bits (140), Expect = 8e-10
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Frame = +1
Query: 76 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR--- 246
++ S C+ C GH +C + S D CFKC H +CK++ +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 247 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRESA 378
C+ C GHI+R+C Q+ PD C C H+ R+CPE + A
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPELAAQKA 330
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 471
+C++C + GH +CP+ S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 472 HISRECDEARN 504
HISR+C + N
Sbjct: 290 HISRDCHQNVN 300
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/145 (26%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
Frame = +1
Query: 94 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 273
+ C R H + +C + V+ F + K CN H C E D + C G H
Sbjct: 386 HNCERICH-SGDCGECTVILEQDCFCGKTPKEVSCNPCAHEKYSCGSECDGMFSC-GIHH 443
Query: 274 IARECAQSPDEPSCYNCNKTGHIARNCPEGGR--ESATQTCYNCNKSGHISRNCPDGTKT 447
++C + C C + R CP G +S T C + D T
Sbjct: 444 CTKKC----HDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLT 499
Query: 448 CYVCGKPGHISRECDEARN*PQPPC 522
C GK H +C E P PPC
Sbjct: 500 CGTPGKNHHCREKCHEG---PCPPC 521
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Frame = -3
Query: 439 CRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNMTARPGSVRTRA 278
C CG C C R+ Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 277 LCAQCRYICSNGQPLPCNPSQSVLCGC 197
CR C G PCN + SV+C C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVICRC 531
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 355 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 516
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 244 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 372
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 184 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 294
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 355 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 516
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 244 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 372
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 184 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 294
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 355 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 516
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 244 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 372
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 184 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 294
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 355 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 516
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 244 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 372
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 184 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 294
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 379 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 519
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 187 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 291
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 444
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.083
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 238 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 393
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 82 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 228
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 379 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 519
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 187 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 291
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 444
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.083
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +1
Query: 238 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 393
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 82 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 228
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = -3
Query: 439 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNMTARPGSVRTRALCAQC 263
C S G CG+TCC APP S CG P C C V T C C
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCC 114
Query: 262 RYICSNGQPLPCNPSQSVLCGCT 194
+ +C+N C CGCT
Sbjct: 115 QPVCTNA----CTNGGGCSCGCT 133
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 468
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 469 GHISREC 489
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 181 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 345
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 346 RNCPE 360
NCP+
Sbjct: 688 WNCPK 692
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 238 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 408
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 409 GHISRNCP 432
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 82 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 258
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 259 NGTGHIARECAQSPDEPS 312
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 468
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 469 GHISREC 489
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 181 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 345
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 346 RNCPE 360
NCP+
Sbjct: 591 WNCPK 595
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 238 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 408
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 409 GHISRNCP 432
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 82 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 258
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 259 NGTGHIARECAQSPDEPS 312
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 468
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 469 GHISREC 489
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 181 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 345
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 346 RNCPE 360
NCP+
Sbjct: 602 WNCPK 606
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 238 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 408
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 409 GHISRNCP 432
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 82 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR-CYRC 258
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 259 NGTGHIARECAQSPDEPS 312
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 261
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 262 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 417
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 418 ----SRNCPDGTKTCYVC 459
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.33
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 109 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 273
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 274 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 441
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 442 KTC 450
C
Sbjct: 2005 GGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 261
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 262 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 417
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 418 ----SRNCPDGTKTCYVC 459
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.33
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 109 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 273
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 274 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 441
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 442 KTC 450
C
Sbjct: 2005 GGC 2007
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 261
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 262 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 417
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 418 ----SRNCPDGTKTCYVC 459
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.33
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 109 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 273
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 274 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 441
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 442 KTC 450
C
Sbjct: 2005 GGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 39.9 bits (89), Expect = 0.001
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 15/138 (10%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 261
C C GH A C + D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 262 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI 417
T + A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 418 ----SRNCPDGTKTCYVC 459
SR+C + CY+C
Sbjct: 1944 NLTDSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.33
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = +1
Query: 109 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 273
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 274 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 441
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 442 KTC 450
C
Sbjct: 2005 GGC 2007
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 486
+C+NC++ GH A CP G+ Q ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 487 C 489
C
Sbjct: 265 C 265
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +1
Query: 217 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 396
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 397 CNKSGHISRNCPDG 438
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 35.1 bits (77), Expect = 0.036
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1
Query: 187 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 351
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 352 CPEGGRESATQTCY 393
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 31.9 bits (69), Expect = 0.33
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 76 MSSSVCYKCNRTGHFARECTQGGV 147
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.007
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 313 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 429
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 208 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 363
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 388 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 489
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 231
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.007
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 313 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 429
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.020
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +1
Query: 208 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 363
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 388 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 489
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCK 231
C C H + EC V+ KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQI-------KCTNCGAFGHISKDCK 469
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.009
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 382 QTCYNCNKSGHISRNCPDG 438
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.027
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 310 SCYNCNKTGHIARNCPEG 363
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.33
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 76 MSSSVCYKCNRTGHFARECTQG 141
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 0.58
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 442 KTCYVCGKPGHISREC 489
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 187 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 276
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 238 ADR-CYRCNGTGHIAREC 288
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 36.7 bits (81), Expect = 0.012
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = +1
Query: 124 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 303
R C Q + + GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 304 E----PSCYNCNKTGHIARNCPEGGRESATQTCYNCN--KSGHISRNCPDG 438
P C C H A C + ++ C C +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.027
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +1
Query: 247 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 411
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.25
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 307 PSCYNCNKTGHIARNCPEGGRES 375
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 2.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 388 CYNCNKSGHISRNCPDGT 441
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 183
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.047
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -3
Query: 436 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNMTARPGSVRTRA 278
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 277 LCAQCRYICSNGQPLP 230
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 49 IERSNRNIAMSSSVCYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFAR 222
+ + N+ A + C++C+R GHF C Q + +R + ++ N +G +
Sbjct: 1343 LRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFK 1402
Query: 223 DCKEEADR 246
+ +E DR
Sbjct: 1403 NGEEGGDR 1410
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 274 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 438
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.063
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 247 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 426
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.063
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 247 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 426
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 34.3 bits (75), Expect = 0.063
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Frame = +1
Query: 52 ERSNRNIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFN---RQREKCFKCNRTGHFAR 222
ER+ A V K N++ + + V ++S F+ +Q+E K F +
Sbjct: 504 ERTENENAEKVKVQEKKNQSEKNGNKISNASEVQKNSNFHNAPKQQENFRKAEDQNWFNK 563
Query: 223 DCKEEADRCYRCNGTGHIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNC 399
+ + G I EC Q EPSC KT R P+ C+ C
Sbjct: 564 KSLQTSSDQVNVPENG-ICAECKQVGGHEPSCSLAPKTWKRERPPPQ---------CFTC 613
Query: 400 NKSGHISRNCP 432
+ GHIS CP
Sbjct: 614 GEMGHISTYCP 624
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 46 SIERSNRNIAM-SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFAR 222
S++ S+ + + + +C +C + G C+ + + R +CF C GH +
Sbjct: 565 SLQTSSDQVNVPENGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHIST 621
Query: 223 DCKEEADR 246
C + DR
Sbjct: 622 YCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +1
Query: 247 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 360
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = -3
Query: 427 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 266
S +C TC S S+ TP P + V+C PSC +C + P +V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 265 CRYICSNGQPL-PCNPSQSVLC 203
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.19
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -3
Query: 427 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 266
S +C TC S S+ TP P + V+C PSC +C + P V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 265 CRYICSNGQPL-PCNPSQSVLC 203
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 85 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 258
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 259 NGTGH 273
G H
Sbjct: 371 KGNHH 375
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = +1
Query: 313 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVCGK 465
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 466 PGHISREC 489
H + C
Sbjct: 372 GNHHTVFC 379
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Frame = -3
Query: 427 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNMTARPGSVRTRALCAQC 263
+C +C +C + + + +C P C C C A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 262 RYICSNGQPLPCNPSQSVLCGC 197
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 226 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 402
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 403 KSGHISRNCPDGTKTC 450
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 226 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 402
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 403 KSGHISRNCPDGTKTC 450
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 439 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 317
CR C C RTCC + T P CG CC C
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 116
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 439 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 317
CR C C RTCC + T P CG CC C
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 119
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 RTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAAT 518
RT L R G + ++V LP SR +DV+ + RQA P + RRG +++
Sbjct: 643 RTTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSS 702
Query: 519 LSPLQS 536
LS L S
Sbjct: 703 LSNLPS 708
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +1
Query: 55 RSNRNIAMSSSVCY--KCNRTGHFARE-CTQGGVVSRDSGFNRQREKCFKCN 201
RSN +VC KCN F + CT GG V ++ F KC N
Sbjct: 371 RSNEKFEPCKTVCSDTKCNEEPRFCPQVCTGGGCVCQEGFFRDNSGKCVTQN 422
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +1
Query: 55 RSNRNIAMSSSVCY--KCNRTGHFARE-CTQGGVVSRDSGFNRQREKCFKCN 201
RSN +VC KCN F + CT GG V ++ F KC N
Sbjct: 476 RSNEKFEPCKTVCSDTKCNEEPRFCPQVCTGGGCVCQEGFFRDNSGKCVTQN 527
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 430 PD-GTKTCYVCGKPGHISRECDEAR 501
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 430 PD-GTKTCYVCGKPGHISRECDEAR 501
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 430 PD-GTKTCYVCGKPGHISRECDEAR 501
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 418 RCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALC-AQCRYICSN 245
RC TC + + P P PR S+ C PSC P V+ +LC QCR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 198
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 172 RQREKCFKCNRTGHFARDCKEEA 240
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 313 CYNCNKTGHIARNC 354
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 388 CYNCNKSGHISRNCPDGTKTCYVC 459
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 388 CYNCNKSGHISRNCP 432
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 4.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 313 CYNCNKTGHIARNCPE 360
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 217 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 360
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -3
Query: 415 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 242
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 107 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 165
Query: 241 QPL-PCNPSQSVLC 203
QP+ C P C
Sbjct: 166 QPIQQCQPQCQQQC 179
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -3
Query: 415 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 242
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 108 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 166
Query: 241 QPL-PCNPSQSVLC 203
QP+ C P C
Sbjct: 167 QPIQQCQPQCQQQC 180
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 388 CYNCNKSGHISRNCPDGTKTCYVC 459
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/76 (22%), Positives = 26/76 (34%)
Frame = +1
Query: 256 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 435
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 436 GTKTCYVCGKPGHISR 483
CG P +S+
Sbjct: 96 ANWNMQKCGIPHVVSK 111
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 232 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 339
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Frame = -3
Query: 409 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSCNMTARP--GSVRTRALCAQCRYICSNGQ 239
RTCC A+ P PP P+ CC R S C R C
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 238 PLPCNPSQSVLC 203
P CN Q C
Sbjct: 190 PTCCNQGQKACC 201
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 439 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 317
CR C C RTCC +R + CG CC C
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGC 116
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 439 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 317
CRR C C RTCC + T P CG CC C
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 130
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 220 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 396
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 397 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 498
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 220 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 396
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 397 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 498
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 220 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 396
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 397 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 498
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 220 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 396
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 397 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 498
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 439 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 317
CRR C C RTCC + T P CG CC C
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 439 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 317
CRR C C RTCC + T P CG CC C
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 91 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 267
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 268 GHIARECAQSPDEPS 312
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 448 CYVCGKPGHISREC 489
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 220 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 396
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 397 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 498
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -3
Query: 334 PSCCSCNMTARPGSVRTRAL----CAQCRYICSNGQPLPCNPSQSVLCGCT 194
P+CC+C M + S T+ C C S + C+P S C CT
Sbjct: 49 PTCCACWMRRKKESTTTKVCVQDDCTTCS-CTSASRCSRCSPCCSGCCSCT 98
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 364 GRESATQTCYNCNKSGHISRNCP 432
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 364 GRESATQTCYNCNKSGHISRNCP 432
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 226 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 402
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 403 KSGHISRNCPDGTKTC 450
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 352 CPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 504
CP ++ QTC + + R C + + C +C P HI+ C A++
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 283 RALCAQCRYICSNGQPLPCNPSQSVLCGC 197
R++C +C C N P P NP ++ C
Sbjct: 42 RSVCQECPSCCGNDGPQPFNPVFNIHFNC 70
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -3
Query: 412 GRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ 266
G C + S P C P CC C+ A+PG A A+
Sbjct: 13 GTLACFPTSQRSYQYGAPTQQFAACTPQCCGCSQ-AQPGPQPAAAAAAR 60
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -3
Query: 424 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 338
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Frame = -3
Query: 418 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCA-----QCRYI 254
+C C ++ PP SS C SC P V+ + +CA C+
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMP---QCTPQCVQQQTICAAACQPSCQSS 348
Query: 253 C-SNGQPL-PCNPSQSVLC 203
C SN Q + C PS C
Sbjct: 349 CSSNAQCVQACLPSCESSC 367
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 27.5 bits (58), Expect = 7.2
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Frame = +1
Query: 196 CNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDE-PSCYNCNKTGHIARN----CPE 360
C + ++ C +A R NG G A C +P + Y+C A CP
Sbjct: 103 CVGSTRISQPCGTQACNYPRTNGPG--APCCIGTPKVINNWYHCGSNSQNAAPTQPCCPV 160
Query: 361 GGRESA-TQTCYN-CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQPP 519
GG + T+ +N N SR+C G C G+ EC P PP
Sbjct: 161 GGVWTEWTRWAHNGANVEWSRSRDCISGGYNCACIGENQETKFECPCTPMKPIPP 215
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +1
Query: 181 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 360
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 361 GGRESATQ-TCYNCNK 405
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +1
Query: 136 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 288
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 289 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 438
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +1
Query: 181 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 360
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 361 GGRESATQ-TCYNCNK 405
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +1
Query: 340 IARNCPEG------GRESATQTCYNCNKSGHISRNCPDGTKTCY 453
++ CP G G S C N +G +S CPDG TCY
Sbjct: 682 LSEACPPGTVVAKDGDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -3
Query: 430 DSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNMTARPGSVRTRALCAQCR-Y 257
DS C TC + S P + P+ S +T+ P + R +C Q
Sbjct: 1018 DSLTDCLETCVANGIKFSSLANSPMSAVPPPPPTLMPSPPVTSSPFTFVPRNMCPQGDPL 1077
Query: 256 ICSNGQPLPCNPSQSVLC 203
I +G P+ C+PS++ C
Sbjct: 1078 ITVDGTPIQCDPSKAAKC 1095
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 430 PDGTKTCYVCGKPGHISRECDEARN 504
P+ + C +CG+ GH +EC A N
Sbjct: 258 PNQPRACDLCGQYGHELKECRGAEN 282
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +1
Query: 136 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 288
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 289 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 438
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = +1
Query: 136 QGGVVSRDSGFNRQREKCFKCNRTGHFARD----CKEEADRCYRCNGTGHIAREC----- 288
+GG + N + C +C + G++ +E+A R C+ G ++ C
Sbjct: 382 EGGGRCLECAHNTEGFNCERC-KDGYYRPSGLSHYREDACRTCECDPVGSVSDACVRDDQ 440
Query: 289 -AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 438
A++ +P C G C G R T CN++G ++ + DG
Sbjct: 441 SAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDG 493
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -3
Query: 409 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRA 278
RTCC SA+ P+ S + C P CN AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical
protein F46B3.2 protein.
Length = 190
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 427 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPG 296
SCG C + + + S T P +++ C S C+ A+ G
Sbjct: 124 SCGLCTGNVTTPATTTSTTTPVPLTTTIECKDSLLRCSEMAKKG 167
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/50 (26%), Positives = 17/50 (34%)
Frame = +1
Query: 256 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNK 405
C I A +P E C NK + R C G + C+K
Sbjct: 77 CQSACGIPHVLASNPTEEVCEKWNKCDDVKRQCAAAGGNYYAGANFQCSK 126
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Frame = +1
Query: 301 DEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHI---SRNCPDGTKTC-----YV 456
+ P C NC+ + A+N G + YN N GH+ +C D C V
Sbjct: 1199 ETPRCTNCSIHAYCAQNPTSGAYQCKCNAGYNGN--GHLCVSMSSCLDDRSLCDENADCV 1256
Query: 457 CGKPGHISREC 489
G+ GH C
Sbjct: 1257 PGEAGHYVCNC 1267
>Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical
protein C18E9.3c protein.
Length = 560
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +1
Query: 241 DRCYRCNGTGHIARECAQS------PDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCN 402
+RC NG + R Q +P + G+ +N P GR+ Q N
Sbjct: 421 NRCMTNNGQNYQNRNMQQQGQQRSYSSQPQNGQFYQNGNSNQNNPNNGRKQQHQPQQQQN 480
Query: 403 KSGHISRNCPDGTKTCY 453
KSG +N D K Y
Sbjct: 481 KSGKFGQNRNDMQKNNY 497
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +1
Query: 241 DRCYRCNGTGHIARECAQS------PDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCN 402
+RC NG + R Q +P + G+ +N P GR+ Q N
Sbjct: 481 NRCMTNNGQNYQNRNMQQQGQQRSYSSQPQNGQFYQNGNSNQNNPNNGRKQQHQPQQQQN 540
Query: 403 KSGHISRNCPDGTKTCY 453
KSG +N D K Y
Sbjct: 541 KSGKFGQNRNDMQKNNY 557
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +1
Query: 241 DRCYRCNGTGHIARECAQS------PDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCN 402
+RC NG + R Q +P + G+ +N P GR+ Q N
Sbjct: 484 NRCMTNNGQNYQNRNMQQQGQQRSYSSQPQNGQFYQNGNSNQNNPNNGRKQQHQPQQQQN 543
Query: 403 KSGHISRNCPDGTKTCY 453
KSG +N D K Y
Sbjct: 544 KSGKFGQNRNDMQKNNY 560
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +1
Query: 367 RESATQTCYN---CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQPPCLPYNQ 537
+ESA ++C C+ I C D + + P + E R QPP + YN
Sbjct: 44 KESAFKSCVRRPACHTERKIFDECFDASVSATHISPPQESTSNDGETRKVTQPPMVKYNS 103
Query: 538 L 540
L
Sbjct: 104 L 104
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 342
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 343 ARNCPEG 363
+ P+G
Sbjct: 65 RKFGPKG 71
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 175 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 342
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 343 ARNCPEG 363
+ P+G
Sbjct: 65 RKFGPKG 71
>U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform b protein.
Length = 256
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Frame = +1
Query: 61 NRNIAMSSSVCYKCNRT-GHFARECTQGGVVSRDSGFNRQREKCFKCNR--TGHF--ARD 225
N+N + C +CN+ G G + F KC C++ T +F A
Sbjct: 164 NKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFRLFAPKCNGCSQPITSNFITALG 223
Query: 226 CKEEADRCYRCNGTGHIAREC 288
D C+ C G H A++C
Sbjct: 224 THWHPD-CFVCQGNTHFAQQC 243
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = +1
Query: 223 DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCN 402
DC+ E+D CN A +C ++ C +K +C +G E C C
Sbjct: 241 DCENESDES-NCNKCQKGAHKCGKN-----CIKASKVCDGIPDCDDGSDEHQCD-CKTC- 292
Query: 403 KSGHISRNCPDGT 441
SG C DGT
Sbjct: 293 -SGSEKALCEDGT 304
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = -3
Query: 388 RSASQTPAPPRDSSVRCG-PSCC--SCNMTARPGSVRTRALCAQ----CRYICS-NGQPL 233
R + T P D +++ +CC C ++ ++ + C CR + + NG+P+
Sbjct: 285 RKNAVTVVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTCCRSFHSGCREVETLNGKPI 344
Query: 232 PCNPSQSVLCG 200
P + +S +CG
Sbjct: 345 PDDQCESCVCG 355
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = -3
Query: 388 RSASQTPAPPRDSSVRCG-PSCC--SCNMTARPGSVRTRALCAQ----CRYICS-NGQPL 233
R + T P D +++ +CC C ++ ++ + C CR + + NG+P+
Sbjct: 285 RKNAVTVVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTCCRSFHSGCREVETLNGKPI 344
Query: 232 PCNPSQSVLCG 200
P + +S +CG
Sbjct: 345 PDDQCESCVCG 355
>AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical
protein Y71H2AM.2 protein.
Length = 300
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 403 CCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRYI 254
C S + PAPP VRC C+C + + S R CR +
Sbjct: 81 CHSCDEATPIRPAPPGKKYVRCP---CNCLLICKASSTRIACPRNNCRRV 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,723,150
Number of Sequences: 27780
Number of extensions: 284320
Number of successful extensions: 1648
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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