Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6e04
(661 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 51 7e-07
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 39 0.003
11_01_0211 - 1660249-1660352,1660504-1660547,1660893-1660934,166... 38 0.005
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 36 0.022
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 36 0.029
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 36 0.038
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 36 0.038
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 35 0.066
04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581 34 0.087
11_04_0293 + 15926561-15928834 34 0.12
02_05_1340 + 35797923-35799881 33 0.27
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 32 0.35
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 31 0.61
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 31 0.61
07_03_0898 - 22403337-22404950 31 0.81
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 30 1.4
01_03_0126 + 12741397-12743022 30 1.4
01_06_0091 - 26363070-26363361,26363467-26363625,26363708-263638... 30 1.9
10_07_0098 - 12844631-12845074,12845329-12846570 29 2.5
05_03_0569 - 15568538-15570049 29 2.5
02_01_0094 - 667361-668962 29 2.5
02_01_0093 + 655420-657021 29 2.5
04_04_1680 + 35318330-35318693,35319789-35319877,35320082-353200... 29 3.3
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 29 3.3
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 28 7.6
07_03_0899 + 22421038-22422642 28 7.6
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 28 7.6
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 28 7.6
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 51.2 bits (117), Expect = 7e-07
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +2
Query: 257 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 436
G+GKF L ++ + ++ + + N+S + ++++ + GM+ A
Sbjct: 209 GFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVFAGMLIGA 268
Query: 437 MVWGFLSDTLGRRQIMVWG-FFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 592
WGF+SD GRR +++ F SG+ L +A S N++ LL +RF G G
Sbjct: 269 SGWGFVSDKYGRRICLLFSTLFASGMGFL-SAFSPNYSCLLALRFLVGIGVGG 320
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 257 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 436
G+GKF ++ S ++ Q + LS +T++ + GM+ A
Sbjct: 42 GFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVVFVGMLVGA 101
Query: 437 MVWGFLSDTLGRRQIMV 487
WG +SD GRRQ ++
Sbjct: 102 YSWGIVSDNYGRRQAVM 118
>11_01_0211 -
1660249-1660352,1660504-1660547,1660893-1660934,
1661010-1661098,1661181-1661225,1661501-1661545,
1661574-1661681,1661765-1661850,1662253-1662340,
1662884-1663084,1663491-1663566,1663652-1663701,
1663783-1663845,1663924-1663977,1664093-1664195,
1664328-1664430,1664516-1664576,1664872-1664912,
1666605-1666761
Length = 519
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = +2
Query: 392 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 571
G V A G ++ +WG +D +GR+ ++V+G F + +S + + RF
Sbjct: 84 GFVGASFMFGRCLTSTIWGIAADRIGRKPVVVFGIFAVVIFNTLFGLSFTYWMAIATRFL 143
Query: 572 SGFLFNGPFAVLISYIAELHR 634
G L NG + +Y E+ R
Sbjct: 144 LGAL-NGLLGPIKAYAIEVCR 163
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +2
Query: 254 TGYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISS 433
+G+G++ + ++ + ++ Q + L+ +T++ + GM+
Sbjct: 19 SGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMITSIVFVGMLIG 78
Query: 434 AMVWGFLSDTLGRRQI 481
A WG +SD GRRQ+
Sbjct: 79 AYTWGVVSDNYGRRQL 94
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 431 SAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLI 610
++++WG ++D +GR+ ++++ F ++ +S + + RF G L NG A +
Sbjct: 71 ASILWGMVADRIGRKPVIIFSIFAVIVLNTLFGLSVKYWMAVTTRFLLGAL-NGLLAPIK 129
Query: 611 SYIAELHRTXLRA 649
+Y E+ R +A
Sbjct: 130 AYSIEVCRAEHQA 142
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +2
Query: 431 SAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLI 610
++++WG ++D +GR+ ++++ F ++ +S + + RF G L NG A +
Sbjct: 81 ASILWGMVADRIGRKPVIIFSIFAVIVLNTLFGLSVKYWMAVTTRFLLGAL-NGLLAPIK 139
Query: 611 SYIAELHR 634
+Y E+ R
Sbjct: 140 AYSIEVCR 147
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 35.5 bits (78), Expect = 0.038
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Frame = +2
Query: 257 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 436
G+G+F ++ + ++ + + +S G V+++ + GM+ A
Sbjct: 27 GFGRFQALVLAYACVGWVAEAMEVMLLSFVGPSVKAEWGVSGAAEGLVSSVVFAGMLIGA 86
Query: 437 MVWGFLSDTLGRRQIMVW------------GFF----CSGLVELTAAMSQNFATLLVMRF 568
+ G +SD GR ++ GF +G+ L +A S N+A+LLV+RF
Sbjct: 87 CLGGLISDRYGRSFLIATLQSKYIYFNFGIGFLSTAVVTGIFGLLSAFSPNYASLLVLRF 146
Query: 569 ASG 577
G
Sbjct: 147 VVG 149
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 34.7 bits (76), Expect = 0.066
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 344 IFSRAQCDMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWG---FFCSGLV 514
++ + + ++ L G + AM+ G G ++D+ GRR +++ +F SGLV
Sbjct: 30 LYIKKEFNLQSEPLIEGLIVAMSLIGATIITTFSGAVADSFGRRPMLIASAVLYFVSGLV 89
Query: 515 ELTAAMSQNFATLLVMRFASGFLFNGPFAVLISYIAELHRTXLR 646
L A N LL+ R GF ++ YI+E T +R
Sbjct: 90 MLWA---PNVYVLLLARLIDGFGIGLAVTLVPLYISETAPTDIR 130
>04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581
Length = 521
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 389 MGTVTAMTYGGMISSAMVWGFLSDT-LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMR 565
+G V A+ + G + A V+G LSD+ LGR+ + +G+ + AM+ N+ +R
Sbjct: 118 VGLVQAIFFAGCMIGAGVFGHLSDSFLGRKGSLQVVCVLNGVFGMLTAMAPNYWAYAALR 177
Query: 566 FASGF 580
+GF
Sbjct: 178 LLTGF 182
>11_04_0293 + 15926561-15928834
Length = 757
Score = 33.9 bits (74), Expect = 0.12
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +2
Query: 392 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWG---FFCSGLVELTAAMSQNFATLLVM 562
G V AM+ G G +SD +GRR +++ +F GL+ L S N LL+
Sbjct: 46 GLVVAMSLIGATIITTFSGPVSDLVGRRPMLIASSLLYFAGGLIML---WSPNVYVLLLA 102
Query: 563 RFASGFLFNGPFAVLISYIAELHRTXLRARV 655
R GF ++ YI+E +R R+
Sbjct: 103 RLVDGFGVGLAVTLVPVYISETSPPEIRGRL 133
>02_05_1340 + 35797923-35799881
Length = 652
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = +2
Query: 392 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 571
G V A + G G LSD+ GRR +++ L L S N LL+ R
Sbjct: 47 GLVVATSLIGATIVTTFSGPLSDSRGRRPMLIASALLYSLAGLLMLWSPNVPILLLARLV 106
Query: 572 SGFLFNGPFAVLISYIAE 625
GF ++ YI+E
Sbjct: 107 DGFAIGLAVTLVPVYISE 124
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +2
Query: 392 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 571
G + AM+ G G +SD +GRR +++ L L S N LL+ R
Sbjct: 75 GLIVAMSLIGATIITTFSGPVSDWIGRRPMLILSSILYFLSSLIMLWSPNVYVLLLARLI 134
Query: 572 SGFLFNGPFAVLISYIAELHRTXLR 646
GF ++ YI+E + +R
Sbjct: 135 DGFGIGLAVTLVPLYISETAPSEIR 159
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 419 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 598
G +A+ WG ++D +GR+ ++V+ + +S + L RF G L NG
Sbjct: 98 GRSFAAIFWGVVADRIGRKPVIVFSILSVVIFNTLFGLSTKYWMALTTRFVLGAL-NGLL 156
Query: 599 A 601
A
Sbjct: 157 A 157
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 365 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVW--GFFCSGLVELTAAMSQ 538
DM LS ++ + M++S + G+ +DTLGRR +V F +G L ++
Sbjct: 61 DMGLSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLANAFLMAG--ALAMSLGA 118
Query: 539 NFATLLVMRFAS 574
+A L+ RF +
Sbjct: 119 TYAALMAARFVT 130
>07_03_0898 - 22403337-22404950
Length = 537
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 413 YGGMISSAMVWGFLSDT-LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 580
+ G ++ + L+DT LGRR+++V + + A S N +RF SGF
Sbjct: 127 FAGNLAGGFLLTTLADTHLGRRKMLVLSLATMSVAGVLTAFSPNVWVYAALRFVSGF 183
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 419 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 598
G +A+ WG ++D +GR+ ++++ + +S + L RF G L NG
Sbjct: 52 GRSFAAIFWGVVADRIGRKPVIMFSILSVVIFNTLFGLSTKYWMALTTRFVLGAL-NGLL 110
Query: 599 A 601
A
Sbjct: 111 A 111
>01_03_0126 + 12741397-12743022
Length = 541
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 413 YGGMISSAMVWGFLSDT-LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 580
+ G ++ + L+DT LGRR++++ + A S N +RF SGF
Sbjct: 133 FAGNLAGGFLLATLADTHLGRRKMLLLSLVTMSVAAALTAFSPNVWVYSALRFVSGF 189
>01_06_0091 -
26363070-26363361,26363467-26363625,26363708-26363880,
26366639-26366810,26366912-26367294
Length = 392
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 38 PHHRLGAPSPAGSRTCAMAVGQDAGAARPAEEIP 139
P H GA GSR+CA AG+A PA +P
Sbjct: 292 PTHYNGADWGEGSRSCAQQTQPVAGSAYPAGPVP 325
>10_07_0098 - 12844631-12845074,12845329-12846570
Length = 561
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = +2
Query: 350 SRAQCDMNLSLLDMGTVTAMTYGGMIS------SAMVWGFLSDTL 466
+RA C MNL+L + + +T GG+I+ S+ ++G SDT+
Sbjct: 140 TRATCPMNLALAVVAELDDLTVGGLINGYGIEGSSHLYGLFSDTV 184
>05_03_0569 - 15568538-15570049
Length = 503
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 430 VRDGVGLPVGHARPAPDHGVGLLLLRPGRAHGRHEPELRHALSHEVR 570
V++ VG VG+A P + LLL G RH+P R A + R
Sbjct: 99 VQENVGWGVGYAIPTAGLALSLLLFYVGTPFYRHKPVRRGAAAGPAR 145
>02_01_0094 - 667361-668962
Length = 533
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 365 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNF 544
++NL+ D+G + G I S + G + D LG R + + ++ +
Sbjct: 93 NLNLTKADIGNAGVASVSGSIFSRLAMGAICDMLGPRYGCAFLIMLAAPTVFCMSLIDSA 152
Query: 545 ATLLVMRFASGF 580
A + +RF GF
Sbjct: 153 AGYIAVRFLIGF 164
>02_01_0093 + 655420-657021
Length = 533
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 365 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNF 544
++NL+ D+G + G I S + G + D LG R + + ++ +
Sbjct: 93 NLNLTKADIGNAGVASVSGSIFSRLAMGAICDMLGPRYGCAFLIMLAAPTVFCMSLIDSA 152
Query: 545 ATLLVMRFASGF 580
A + +RF GF
Sbjct: 153 AGYIAVRFLIGF 164
>04_04_1680 +
35318330-35318693,35319789-35319877,35320082-35320087,
35320638-35321300
Length = 373
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 174 EDKPVTLYRWSWGISSAGRAAPASCPTAIAQVRLPAG 64
E++ + YR SW S + R P C T++ +R G
Sbjct: 96 EEEQIRNYRTSWDSSLSSRYGPFQCTTSVPAMRYTHG 132
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 564 LMTKSVAKFWLMAAVSSTRPEQKKPHTMIWRRPSVSDRKPHTIADDII 421
L V K W AA+++ P P M W SD+ PH + D++
Sbjct: 51 LAVADVCKSWCCAAIAAGVPRSCTPWLMSW-----SDKPPHELEYDVL 93
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 419 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 598
G +++ WG ++D +GR+ I+ + + +S + + RF G L NG
Sbjct: 67 GRCFASLFWGVVADRIGRKPIIKFSILSVVIFNTLFGLSVKYWMAIATRFLLGAL-NGML 125
Query: 599 A 601
A
Sbjct: 126 A 126
>07_03_0899 + 22421038-22422642
Length = 534
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 413 YGGMISSAMVWGFLSDTL-GRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 580
+ G ++ + L+DTL GRR+++V + + S N +RF GF
Sbjct: 135 FAGNLAGGFLLTTLADTLLGRRKMLVLSLVTMSVAGVLTVFSPNVWVYAALRFVCGF 191
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 510 RPEQKKPHTMIWRRPSVSDRKPHTIA 433
+PEQ++P WR+P V KP +A
Sbjct: 453 KPEQQRPEPETWRKP-VEPPKPEVVA 477
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +2
Query: 392 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 571
G V A + G SA+ WG +D GR+ +V + +S + +V R
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRKPCIVISILSVIVFNTLFGLSTTYWMAIVTRGL 146
Query: 572 SGFLFNGPFAVLISYIAELHR 634
G L G + +Y +E+ R
Sbjct: 147 LGLLC-GILGPIKAYASEVCR 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,113,806
Number of Sequences: 37544
Number of extensions: 293631
Number of successful extensions: 1359
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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