Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6e04
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 52 4e-07
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 41 9e-04
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 40 0.002
Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical pr... 37 0.011
AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical ... 37 0.011
U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned expre... 36 0.025
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 36 0.034
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 33 0.14
U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 33 0.18
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 33 0.24
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 33 0.24
U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical p... 32 0.41
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 31 0.55
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 31 0.96
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 30 1.7
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 29 2.2
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 29 2.9
AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP ... 29 2.9
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 29 2.9
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 29 3.9
Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic catio... 28 6.8
Z72505-3|CAA96610.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/135 (24%), Positives = 59/135 (43%)
Frame = +2
Query: 257 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 436
G+G+F L L + + I C+ +S + VT + GM+ S+
Sbjct: 77 GFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSS 136
Query: 437 MVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLISY 616
WG + D GRR+ + + + ++ + + MS +F LL R +GF G ++
Sbjct: 137 TFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGG-VPQSVTL 195
Query: 617 IAELHRTXLRARVIL 661
AE T RA+ ++
Sbjct: 196 YAEFLPTAQRAKCVV 210
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/135 (24%), Positives = 59/135 (43%)
Frame = +2
Query: 257 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 436
G+G+F L L + + I C+ +S + VT + GM+ S+
Sbjct: 77 GFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSS 136
Query: 437 MVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLISY 616
WG + D GRR+ + + + ++ + + MS +F LL R +GF G ++
Sbjct: 137 TFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGG-VPQSVTL 195
Query: 617 IAELHRTXLRARVIL 661
AE T RA+ ++
Sbjct: 196 YAEFLPTAQRAKCVV 210
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 413 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 592
+ G++ +G +SD +GR+ + V+ L+ ++ N+ LL +RF G G
Sbjct: 92 FAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGG 151
Query: 593 PFAVLISYIAEL 628
V+ +++ E+
Sbjct: 152 TLVVVCTFVMEM 163
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 413 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 592
+ G++ +G +SD +GR+ + V+ L+ ++ N+ LL +RF G G
Sbjct: 92 FAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGG 151
Query: 593 PFAVLISYIAEL 628
V+ +++ E+
Sbjct: 152 TLVVVCTFVMEM 163
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 410 TYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFN 589
T+ G + ++ G+LSDT+GRR + ++ + +A + + + RF GF
Sbjct: 113 TFLGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGFAIA 172
Query: 590 GPFAVLISYIAEL 628
G V +Y +E+
Sbjct: 173 GTLTVGWTYASEM 185
>Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical
protein T05A1.5b protein.
Length = 343
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 347 FSRAQCDMNLS--LLDMGTVTAMTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVE 517
F Q + N++ L+D G +T+ + G ++ +D +GRR +++ F SGL
Sbjct: 104 FVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVAADRIGRRPVLIASLFISGLSG 163
Query: 518 LTAAMSQNFATLLVMRFASGFLF 586
+ AA + F +L+ RF G F
Sbjct: 164 IGAAYAPTFEIMLIGRFFQGSCF 186
>Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical
protein T05A1.5a protein.
Length = 359
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 347 FSRAQCDMNLS--LLDMGTVTAMTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVE 517
F Q + N++ L+D G +T+ + G ++ +D +GRR +++ F SGL
Sbjct: 120 FVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVAADRIGRRPVLIASLFISGLSG 179
Query: 518 LTAAMSQNFATLLVMRFASGFLF 586
+ AA + F +L+ RF G F
Sbjct: 180 IGAAYAPTFEIMLIGRFFQGSCF 202
>Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 416 GGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 577
GGMI S V LSD LGRR + + + S L A + N+ L+ RF SG
Sbjct: 149 GGMIVSPFV-SQLSDILGRRPLFLIPLYISVAANLICAAAPNYLIFLLFRFISG 201
>AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 416 GGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 577
GGMI S V LSD LGRR + + + S L A + N+ L+ RF SG
Sbjct: 149 GGMIVSPFV-SQLSDILGRRPLFLIPLYISVAANLICAAAPNYLIFLLFRFISG 201
>U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned
expression site protein23 protein.
Length = 455
Score = 35.9 bits (79), Expect = 0.025
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 365 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNF 544
D N+S+L V A+ G+ ++++G++SD GR+++ + S ++ L +
Sbjct: 73 DTNVSVLWWENVIAIQQVGIFVGSILFGYISDHFGRQKVCQYSLLISSVILLVEGFLSST 132
Query: 545 ATLLVMRFASGFLFNGPFAVLISYIAEL--HRTXLRAR 652
+ + RF G V S EL RT AR
Sbjct: 133 ILIALCRFIIGTQTGAIIVVSWSLTTELISPRTRFLAR 170
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 35.5 bits (78), Expect = 0.034
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 413 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 592
Y G++ +++G LSD GR+ I + + + L +S N L + RF SG G
Sbjct: 93 YLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQLLFIARFCSGLSIAG 152
Query: 593 PFAVLISYIAE 625
+ ++I E
Sbjct: 153 VLVCICAWILE 163
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +2
Query: 401 TAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 577
T++ + G + ++ ++D GRR I++ +G+V +++ NF LLV RF G
Sbjct: 133 TSIYFLGNLLIGQLFAVVADRFGRRPIIIICLLLTGIVGSLGSLAPNFPLLLVARFIQG 191
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 395 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWG-FFCSGLVELTAAMSQNFATLLVMRFA 571
+++ T+ G + + GFL+D GRR I + F V L+AA++ N + + R
Sbjct: 117 SLSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAIT-NIYSFYIFRIL 175
Query: 572 SGFLFNGPFAVLISYIAELHRTXLRARVI 658
G +G V +Y E+ R R++
Sbjct: 176 IGISVSGTLTVGWTYATEMISPNRRLRIL 204
>U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical
protein B0361.11 protein.
Length = 534
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 398 VTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMR 565
+T T G +I+ + L+D GR+ I+V + L + A+ S NFA L++R
Sbjct: 150 LTIFTIGAVIAVPFM-SMLADRYGRKPIIVTTAILAFLANMAASFSPNFAIFLILR 204
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 413 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 592
Y G++ +++G LSD GRR I + + + ++ + L +RF G G
Sbjct: 93 YVGVLIGTLLFGSLSDRFGRRPIGILVISNAICSTFASGLAPSVKILFPLRFLVGLSIGG 152
Query: 593 PFAVLISYIAEL 628
V+ ++I E+
Sbjct: 153 MLVVICAWIMEV 164
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/78 (20%), Positives = 37/78 (47%)
Frame = +2
Query: 395 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 574
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 148 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 207
Query: 575 GFLFNGPFAVLISYIAEL 628
GF G + V + EL
Sbjct: 208 GFTQPGIYGVAVVLGIEL 225
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/78 (20%), Positives = 37/78 (47%)
Frame = +2
Query: 395 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 574
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 114 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 173
Query: 575 GFLFNGPFAVLISYIAEL 628
GF G + V + EL
Sbjct: 174 GFTQPGIYGVAVVLGIEL 191
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/78 (20%), Positives = 37/78 (47%)
Frame = +2
Query: 395 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 574
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 148 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 207
Query: 575 GFLFNGPFAVLISYIAEL 628
GF G + V + EL
Sbjct: 208 GFTQPGIYGVAVVLGIEL 225
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/78 (20%), Positives = 37/78 (47%)
Frame = +2
Query: 395 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 574
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 114 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 173
Query: 575 GFLFNGPFAVLISYIAEL 628
GF G + V + EL
Sbjct: 174 GFTQPGIYGVAVVLGIEL 191
>U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical
protein T22F3.8 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +2
Query: 494 FFCSGLVELTA------AMSQNFATLLVMRFASGFLFNGPFAVL 607
FF SG+V + A NFA L+++RF GF F+ FA +
Sbjct: 125 FFLSGIVSCISTSLIPFAAKWNFAFLIILRFIQGFSFSADFAAI 168
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 31.5 bits (68), Expect = 0.55
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 371 NLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRR---QIMVWGFFCSGLVELTAAMSQN 541
N S L +++ +G +++ ++V+G +SD+ GR+ Q+ G L+ S+N
Sbjct: 123 NTSKLVKNSISVQMFG-VLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLI---VVQSRN 178
Query: 542 FATLLVMRFASGFLFNGPFAVLISYIAE 625
+ R GF G +++ +I E
Sbjct: 179 LLHFTISRTIVGFFTGGSISIINVFIME 206
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 362 CDMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWG--FFCSGLVELTAAMS 535
C N + + + +G +I S V GFLSD LGR+ + + G + LT +M
Sbjct: 107 CQKNSNQTTAMMSSLLMWGALIGS-FVCGFLSDRLGRKPVYLGCLLMITIGHILLTFSMY 165
Query: 536 QNFATLLVMRFASGFLFNG 592
++ T+ A GF G
Sbjct: 166 LSWMTINATLAAMGFFCGG 184
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +2
Query: 386 DMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMR 565
D + + + G + A+V+G L D GR+ + G + + + + ++ V+
Sbjct: 95 DSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWEVFAVLL 154
Query: 566 FASGFLFNGPFAVLISYIAE 625
F G V +YI E
Sbjct: 155 FICGTSVACIMIVFYAYILE 174
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +2
Query: 452 LSDTLGRRQIMVWGFFCSG---LVE-LTAAMSQNFATLLVMRFASGFLFNGPFAVLISYI 619
L D +GRR I+ G F +G LV L Q + + M F G + G +A + +Y
Sbjct: 417 LIDRIGRRLILAGGLFIAGACLLVNWLMGDNVQLWMAITQMAFTKGSI-TGVYAAIYTYS 475
Query: 620 AELHRTXLR 646
EL T +R
Sbjct: 476 PELFPTVIR 484
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 395 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGL-VELTAAMSQNFATLLVMRFA 571
+ T+ G M+ SA+ G LSD GR++I + F C L +++ S + +++RF
Sbjct: 117 STTSQMIGIMLGSAIA-GQLSDLYGRKKITLL-FLCMMLFFSTSSSFSSSIEVFIIVRFF 174
Query: 572 SGFLFNG 592
G G
Sbjct: 175 IGICCGG 181
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 446 PTPSRTISFLRKSWPSQFPYPRETSSCRTA 357
P S+T L + P Q PYPRE+ + T+
Sbjct: 799 PKHSKTARLLSEETPEQLPYPRESITSTTS 828
>AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1122
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 446 PTPSRTISFLRKSWPSQFPYPRETSSCRTA 357
P S+T L + P Q PYPRE+ + T+
Sbjct: 515 PKHSKTARLLSEETPEQLPYPRESITSTTS 544
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 398 VTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQ--NFATLLVM-RF 568
V+ + GGM S GFL+D GR+ +++ + L + + S+ NF ++V RF
Sbjct: 104 VSMFSVGGMFGS-FCSGFLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRF 162
Query: 569 ASGFLFNGPFAVLISYIAELHRTXLRAR 652
G ++ ++ EL LR +
Sbjct: 163 LVGLNCGITSGLVPMFLTELAPANLRGK 190
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +2
Query: 434 AMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLIS 613
+++ G SD +GRR++++ + L A S N LLV R G ++
Sbjct: 82 SLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPV 141
Query: 614 YIAELHRTXLRARVI 658
Y+ E T +R ++
Sbjct: 142 YLGETAPTHVRGMLV 156
>Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical
protein ZK455.8b protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 MTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRF 568
M+Y G + V GF+SD GR+ + + L S+ F LV+RF
Sbjct: 24 MSYSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRF 78
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 MTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRF 568
M+Y G + V GF+SD GR+ + + L S+ F LV+RF
Sbjct: 312 MSYSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRF 366
>AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic cation
transporter protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 407 MTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRF 568
M+Y G + V GF+SD GR+ + + L S+ F LV+RF
Sbjct: 24 MSYSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRF 78
>Z72505-3|CAA96610.1| 340|Caenorhabditis elegans Hypothetical
protein C50C10.4 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +2
Query: 509 LVELTAAMS----QNFATLLVMRFASGFLFNGPFAVLI 610
L+ LT MS + + L++ RFA FLF PFA+ I
Sbjct: 135 LMRLTIMMSPRHHERYCQLIMYRFAIPFLFLAPFALSI 172
>U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical
protein F32E10.1 protein.
Length = 754
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 474 RRPSVSDRKPHTIADDIIPP*VMAVTVPISKRDK 373
R + SDRK + DD +P +T ISKRDK
Sbjct: 672 RATARSDRKTKKVNDDDVPFGGREMTFTISKRDK 705
>AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical
protein T25D3.4 protein.
Length = 550
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 419 GMIS--SAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 592
G++S SA + G LSD GR+ ++ C+ + +S + L F+ LF+
Sbjct: 120 GLLSFLSAPLVGALSDVWGRKAFLILTVLCTCMPIPCLKISPWWYFSL---FSLSGLFSV 176
Query: 593 PFAVLISYIAEL 628
F+V+++Y+A++
Sbjct: 177 TFSVILAYVADI 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,457,926
Number of Sequences: 27780
Number of extensions: 206057
Number of successful extensions: 774
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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