Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6e02
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    25   1.3  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    24   3.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   4.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.4  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.2  

>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 68  GTSNG-VNKSSGRFPGIVIIIIXAEFCERFSYSGMRAFLTLYL 193
           G S G +N     F  +V I+   E C R +Y G+   +T YL
Sbjct: 177 GDSGGPLNVGDSNFRELVGIVSWGEGCARPNYPGVYTRVTRYL 219


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 343 CGR*HFGCNNCNTAFRSTWKI 405
           CG+     NNC+  FR  W I
Sbjct: 135 CGQFVVALNNCHYLFRHIWDI 155


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 130 NDNNNNSGKTTRTLIHS 80
           N+NNNN+G  T   ++S
Sbjct: 101 NNNNNNNGSNTGATVNS 117


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 359 LVAITAIPHFALPGRLCTLIG-LFMITV 439
           L +   +P   LPGR+  LIG LF  T+
Sbjct: 361 LASEALLPRLPLPGRIKALIGNLFAQTI 388


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 381 GIAVIATKMLPAAYTNIIYKIVLNFPR*LS 292
           GIAV    +L   +T   YK +LN P  LS
Sbjct: 606 GIAVFHNHVLDGGFTLPFYKQLLNKPITLS 635


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,345
Number of Sequences: 2352
Number of extensions: 10095
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)