Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6e01
         (260 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56255-1|AAB03318.1|  113|Homo sapiens CW-1p protein.                 100   2e-21
D50663-1|BAA09317.1|  113|Homo sapiens TCTEL1 protein.                100   2e-21
CR456931-1|CAG33212.1|  113|Homo sapiens TCTEL1 protein.              100   2e-21
BC105588-1|AAI05589.1|  113|Homo sapiens dynein, light chain, Tc...   100   2e-21
BC029412-1|AAH29412.1|  113|Homo sapiens dynein, light chain, Tc...   100   2e-21
AL591025-1|CAH70176.1|  113|Homo sapiens dynein, light chain, Tc...   100   2e-21
AL589931-1|CAI95303.1|  113|Homo sapiens dynein, light chain, Tc...   100   2e-21
U02556-1|AAA57444.1|  116|Homo sapiens protein ( Human RP3 mRNA,...    84   7e-17
CR542213-1|CAG47009.1|  116|Homo sapiens TCTE1L protein.               84   7e-17
CR450320-1|CAG29316.1|  116|Homo sapiens TCTE1L protein.               84   7e-17
BC000968-1|AAH00968.1|  116|Homo sapiens dynein, light chain, Tc...    84   7e-17
AL591025-5|CAH70181.1|   67|Homo sapiens dynein, light chain, Tc...    48   7e-06
BC021177-1|AAH21177.1|  142|Homo sapiens hypothetical protein MG...    36   0.018
DQ132441-1|ABA06522.1|  221|Homo sapiens Tctex2 beta protein.          34   0.071
BC092499-1|AAH92499.1|  221|Homo sapiens Tctex2 beta protein.          34   0.071
AL592166-12|CAI13007.1|  221|Homo sapiens novel Tctex-1 family d...    34   0.071

>U56255-1|AAB03318.1|  113|Homo sapiens CW-1p protein.
          Length = 113

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 39/46 (84%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           KY+VTC I+QKNGAGLHT+SSC+WD++TDGSCTVRWENKTMYCIVS
Sbjct: 62  KYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVS 107


>D50663-1|BAA09317.1|  113|Homo sapiens TCTEL1 protein.
          Length = 113

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 39/46 (84%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           KY+VTC I+QKNGAGLHT+SSC+WD++TDGSCTVRWENKTMYCIVS
Sbjct: 62  KYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVS 107


>CR456931-1|CAG33212.1|  113|Homo sapiens TCTEL1 protein.
          Length = 113

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 39/46 (84%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           KY+VTC I+QKNGAGLHT+SSC+WD++TDGSCTVRWENKTMYCIVS
Sbjct: 62  KYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVS 107


>BC105588-1|AAI05589.1|  113|Homo sapiens dynein, light chain,
           Tctex-type 1 protein.
          Length = 113

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 39/46 (84%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           KY+VTC I+QKNGAGLHT+SSC+WD++TDGSCTVRWENKTMYCIVS
Sbjct: 62  KYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVS 107


>BC029412-1|AAH29412.1|  113|Homo sapiens dynein, light chain,
           Tctex-type 1 protein.
          Length = 113

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 39/46 (84%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           KY+VTC I+QKNGAGLHT+SSC+WD++TDGSCTVRWENKTMYCIVS
Sbjct: 62  KYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVS 107


>AL591025-1|CAH70176.1|  113|Homo sapiens dynein, light chain,
           Tctex-type 1 protein.
          Length = 113

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 39/46 (84%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           KY+VTC I+QKNGAGLHT+SSC+WD++TDGSCTVRWENKTMYCIVS
Sbjct: 62  KYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVS 107


>AL589931-1|CAI95303.1|  113|Homo sapiens dynein, light chain,
           Tctex-type 1 protein.
          Length = 113

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 39/46 (84%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           KY+VTC I+QKNGAGLHT+SSC+WD++TDGSCTVRWENKTMYCIVS
Sbjct: 62  KYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVS 107


>U02556-1|AAA57444.1|  116|Homo sapiens protein ( Human RP3 mRNA,
           complete cds. ).
          Length = 116

 Score = 84.2 bits (199), Expect = 7e-17
 Identities = 31/47 (65%), Positives = 41/47 (87%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VTC ++QK+  G HT+SSC+WD T+DG+CTVRWEN+TM CIV+V
Sbjct: 63  KYIVTCAVVQKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNV 109


>CR542213-1|CAG47009.1|  116|Homo sapiens TCTE1L protein.
          Length = 116

 Score = 84.2 bits (199), Expect = 7e-17
 Identities = 31/47 (65%), Positives = 41/47 (87%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VTC ++QK+  G HT+SSC+WD T+DG+CTVRWEN+TM CIV+V
Sbjct: 63  KYIVTCAVVQKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNV 109


>CR450320-1|CAG29316.1|  116|Homo sapiens TCTE1L protein.
          Length = 116

 Score = 84.2 bits (199), Expect = 7e-17
 Identities = 31/47 (65%), Positives = 41/47 (87%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VTC ++QK+  G HT+SSC+WD T+DG+CTVRWEN+TM CIV+V
Sbjct: 63  KYIVTCAVVQKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNV 109


>BC000968-1|AAH00968.1|  116|Homo sapiens dynein, light chain,
           Tctex-type 3 protein.
          Length = 116

 Score = 84.2 bits (199), Expect = 7e-17
 Identities = 31/47 (65%), Positives = 41/47 (87%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VTC ++QK+  G HT+SSC+WD T+DG+CTVRWEN+TM CIV+V
Sbjct: 63  KYIVTCAVVQKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNV 109


>AL591025-5|CAH70181.1|   67|Homo sapiens dynein, light chain,
          Tctex-type 1 protein.
          Length = 67

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 17/22 (77%), Positives = 22/22 (100%)
 Frame = +3

Query: 27 LQKNGAGLHTSSSCYWDNTTDG 92
          +QKNGAGLHT+SSC+WD++TDG
Sbjct: 1  MQKNGAGLHTASSCFWDSSTDG 22


>BC021177-1|AAH21177.1|  142|Homo sapiens hypothetical protein
           MGC33212 protein.
          Length = 142

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVS 140
           K VV   I ++ G G+  +S C+WD  TD      + N +++C+V+
Sbjct: 90  KMVVQVVIGEQRGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVA 135


>DQ132441-1|ABA06522.1|  221|Homo sapiens Tctex2 beta protein.
          Length = 221

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 3   KYVVTCTIL--QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           +Y + C+++   + G G+H  S   WD   DG  +V + N +++ + +V
Sbjct: 167 RYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATV 215


>BC092499-1|AAH92499.1|  221|Homo sapiens Tctex2 beta protein.
          Length = 221

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 3   KYVVTCTIL--QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           +Y + C+++   + G G+H  S   WD   DG  +V + N +++ + +V
Sbjct: 167 RYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATV 215


>AL592166-12|CAI13007.1|  221|Homo sapiens novel Tctex-1 family
           domain-containing protein protein.
          Length = 221

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 3   KYVVTCTIL--QKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           +Y + C+++   + G G+H  S   WD   DG  +V + N +++ + +V
Sbjct: 167 RYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYTNTSLFAVATV 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,660,850
Number of Sequences: 237096
Number of extensions: 731994
Number of successful extensions: 1376
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)