Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6e01
         (260 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein ...    98   2e-21
AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p pro...    98   2e-21
AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light...    98   2e-21
AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-P...    98   2e-21
AY113461-1|AAM29466.1|  173|Drosophila melanogaster RE37471p pro...    36   0.010
AJ863565-1|CAI10732.1|  173|Drosophila melanogaster dynein light...    36   0.010
AE014297-1064|AAF54474.1|  173|Drosophila melanogaster CG5359-PA...    36   0.010
BT025003-1|ABE01233.1|   97|Drosophila melanogaster IP05158p pro...    33   0.055
BT024239-1|ABC86301.1|  179|Drosophila melanogaster IP16258p pro...    33   0.055
AE014296-2507|AAF49639.1|  142|Drosophila melanogaster CG7276-PA...    33   0.055
AE014296-2506|AAS64993.1|  171|Drosophila melanogaster CG7276-PB...    33   0.055
AY051638-1|AAK93062.1|  400|Drosophila melanogaster GH28857p pro...    28   1.6  
AE014297-3354|AAF56160.2|  400|Drosophila melanogaster CG16705-P...    28   1.6  
AE014297-759|AAF54245.2|  389|Drosophila melanogaster CG17911-PA...    28   1.6  
AY121673-1|AAM52000.1|  639|Drosophila melanogaster RE18651p pro...    27   4.8  
AE013599-3584|AAF46989.2| 1395|Drosophila melanogaster CG13550-P...    27   4.8  
AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-P...    26   6.3  

>Y08968-1|CAA70165.1|  111|Drosophila melanogaster Tctex protein
           protein.
          Length = 111

 Score = 97.9 bits (233), Expect = 2e-21
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 60  KYIVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AY069608-1|AAL39753.1|  111|Drosophila melanogaster LD36705p
           protein.
          Length = 111

 Score = 97.9 bits (233), Expect = 2e-21
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 60  KYIVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AF123058-1|AAD30033.1|  111|Drosophila melanogaster dynein light
           chain subunit protein.
          Length = 111

 Score = 97.9 bits (233), Expect = 2e-21
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 60  KYIVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AE014297-2495|AAF55532.1|  111|Drosophila melanogaster CG12363-PA
           protein.
          Length = 111

 Score = 97.9 bits (233), Expect = 2e-21
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           KY+VT  I+QKNGAGLHT+SSCYW+N TDGSCTVRWENKTMYCIVSV
Sbjct: 60  KYIVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSV 106


>AY113461-1|AAM29466.1|  173|Drosophila melanogaster RE37471p
           protein.
          Length = 173

 Score = 35.5 bits (78), Expect = 0.010
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           K+VV   + Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 121 KHVVQVMLGQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>AJ863565-1|CAI10732.1|  173|Drosophila melanogaster dynein light
           chain protein.
          Length = 173

 Score = 35.5 bits (78), Expect = 0.010
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           K+VV   + Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 121 KHVVQVMLGQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>AE014297-1064|AAF54474.1|  173|Drosophila melanogaster CG5359-PA
           protein.
          Length = 173

 Score = 35.5 bits (78), Expect = 0.010
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           K+VV   + Q+ GAG   +S C WD   D S +  + N +++C+ +V
Sbjct: 121 KHVVQVMLGQELGAGATYNSRCCWDCDCDTSVSEVFSNTSLFCVCTV 167


>BT025003-1|ABE01233.1|   97|Drosophila melanogaster IP05158p
           protein.
          Length = 97

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           K+VV   + Q+ GAG    +   WD  +D   T  ++  +  CI +V
Sbjct: 45  KHVVNVMLYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 91


>BT024239-1|ABC86301.1|  179|Drosophila melanogaster IP16258p
           protein.
          Length = 179

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           K+VV   + Q+ GAG    +   WD  +D   T  ++  +  CI +V
Sbjct: 127 KHVVNVMLYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 173


>AE014296-2507|AAF49639.1|  142|Drosophila melanogaster CG7276-PA,
           isoform A protein.
          Length = 142

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           K+VV   + Q+ GAG    +   WD  +D   T  ++  +  CI +V
Sbjct: 90  KHVVNVMLYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 136


>AE014296-2506|AAS64993.1|  171|Drosophila melanogaster CG7276-PB,
           isoform B protein.
          Length = 171

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 3   KYVVTCTILQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSV 143
           K+VV   + Q+ GAG    +   WD  +D   T  ++  +  CI +V
Sbjct: 119 KHVVNVMLYQQTGAGCFYGARAIWDELSDDYITFTFDGGSFICIAAV 165


>AY051638-1|AAK93062.1|  400|Drosophila melanogaster GH28857p
           protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 27  LQKNGAGLHTSSSCYWDNTTDGSCTVR 107
           L K+GA LH+     WD  TD  CT +
Sbjct: 188 LDKSGAVLHSVRLGEWDTRTDPDCTTQ 214


>AE014297-3354|AAF56160.2|  400|Drosophila melanogaster CG16705-PA
           protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 27  LQKNGAGLHTSSSCYWDNTTDGSCTVR 107
           L K+GA LH+     WD  TD  CT +
Sbjct: 188 LDKSGAVLHSVRLGEWDTRTDPDCTTQ 214


>AE014297-759|AAF54245.2|  389|Drosophila melanogaster CG17911-PA
           protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 146 WAWHITWIYYIHLLA*NLFYNTNKANF*YTDNII 247
           W WH  W YY+ L   N   +T+ +    TD ++
Sbjct: 173 WNWHENWTYYVLLFCQNFAGHTSASGQISTDLLL 206


>AY121673-1|AAM52000.1|  639|Drosophila melanogaster RE18651p
           protein.
          Length = 639

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -2

Query: 157 MPSPKTETMQYIVLFSQRTVHEPSVVLSQ*QEELVCSPAPFFCSI-VQV 14
           +P+PK+   +     S+R  H+P V  S   +E    P P  CS+ VQV
Sbjct: 179 VPTPKSPNSR-----SKRKAHQPGVNQSTQTDEEPADPKPALCSVAVQV 222


>AE013599-3584|AAF46989.2| 1395|Drosophila melanogaster CG13550-PA
           protein.
          Length = 1395

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -2

Query: 157 MPSPKTETMQYIVLFSQRTVHEPSVVLSQ*QEELVCSPAPFFCSI-VQV 14
           +P+PK+   +     S+R  H+P V  S   +E    P P  CS+ VQV
Sbjct: 179 VPTPKSPNSR-----SKRKAHQPGVNQSTQTDEEPADPKPALCSVAVQV 222


>AE013599-1821|AAF58297.2|  260|Drosophila melanogaster CG13353-PA
           protein.
          Length = 260

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 137 LSLWAWHITWIYYIHLL 187
           L ++AW + W YYI LL
Sbjct: 232 LLVYAWLVVWSYYIELL 248


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,546,921
Number of Sequences: 53049
Number of extensions: 218999
Number of successful extensions: 370
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 24,988,368
effective HSP length: 65
effective length of database: 21,540,183
effective search space used: 452343843
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)