Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6d22
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              31   0.037
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.26 
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    26   0.79 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.2  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    24   4.2  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   5.6  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   5.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   5.6  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   7.4  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   7.4  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    23   9.8  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   9.8  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 30.7 bits (66), Expect = 0.037
 Identities = 26/113 (23%), Positives = 44/113 (38%)
 Frame = +3

Query: 213 RGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQKGPS 392
           RG QG ++   R++Q++H         +  +  +Q        +       Q  +Q+   
Sbjct: 212 RGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQ 271

Query: 393 RPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVPE 551
           R Q  +    QQN     QRQ QQ+       +  +QQ +    V RRQ   +
Sbjct: 272 REQQQQQRVQQQNQQH--QRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQ 322



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = +3

Query: 354 RADCQAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHR 533
           R + Q  +Q    + Q  +  + Q   +R   +Q QQ+   + Y   G  Q   Q H  +
Sbjct: 317 RQNTQQQQQSNQPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQRYVVAGSSQQQQQQHQQQ 376

Query: 534 RQ 539
           +Q
Sbjct: 377 QQ 378


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 366 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSIL 515
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +S+L
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLL 513



 Score = 25.4 bits (53), Expect = 1.4
 Identities = 24/106 (22%), Positives = 41/106 (38%)
 Frame = +3

Query: 222 QGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQKGPSRPQ 401
           QG R    + RQ+     R     +  +  +Q      V   L +   Q   Q+   + Q
Sbjct: 260 QGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQ 319

Query: 402 VDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQ 539
             R  + +Q   +  QRQ QQ+   +   +  +QQ   Q   H++Q
Sbjct: 320 QQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQ 365



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 366 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESL 473
           Q  +Q+   + Q  +  + QQ C +  Q+Q QQ+ L
Sbjct: 192 QQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQL 227


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 89  LTPHLHQELMTYWQSSCI*VSSLVNTRPLSPN 184
           L P  HQE MT W+     +      RP +P+
Sbjct: 100 LAPMSHQETMTLWREVAAALDGKAKCRPRTPS 131


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -2

Query: 168  LVFTNDDTHIQLL---CQYVISSWCKCGVRSQRTHGEDEGKQS 49
            LV  N+   +QL      +++S+WC   +    TH  D  K S
Sbjct: 1408 LVNLNNQKRVQLTGAKVHHIMSNWCYAEMTIDTTHTADGSKLS 1450


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 173 AVSYSPMTTLIYSCSASTSSVLGASVA 93
           A+S SP++   +  SASTS+   ASV+
Sbjct: 87  ALSLSPVSVSKFDTSASTSNSSNASVS 113


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 96  GVRSQRTHGEDEGKQSQSH 40
           G+R +RT GED  K  Q H
Sbjct: 284 GIRGRRTDGEDLIKHWQHH 302


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = -2

Query: 300 ILCP*LVGEVHGVPLAVFDQTLHGFLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQY 121
           I C  +VG VH VP   +  T +    N+++  ++  + +     +F   DT I  +  +
Sbjct: 159 IACLTMVGSVHSVPYIFYAGTQYSERSNVTICDMR--KEYTSQMEIFNYIDTVIVFVVPF 216

Query: 120 VI 115
            I
Sbjct: 217 TI 218


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 139 YMSVVIGEYETAIAKCSEYLKEKKGEV 219
           YM  +I + E    +C + LKEK  +V
Sbjct: 550 YMEAIIVDTEKTARRCIQILKEKMLDV 576


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 440 VTPKTKPARKSPGSLPP 490
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 440 VTPKTKPARKSPGSLPP 490
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 440 VTPKTKPARKSPGSLPP 490
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 440 VTPKTKPARKSPGSLPP 490
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 440 VTPKTKPARKSPGSLPP 490
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 440 VTPKTKPARKSPGSLPP 490
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 440 VTPKTKPARKSPGSLPP 490
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
 Frame = +3

Query: 222 QGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH---KQKGPS 392
           Q +++  ++ R    H + LP  +      R  ++P    S++ R   +     K +   
Sbjct: 200 QRNQQEQEQPRASTSHAVMLPRSEAS-TAVRGDVVPELTFSEVVRRRYRGKATGKPRSQQ 258

Query: 393 RPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVP 548
           +PQ  +  + +Q  ++  Q+Q QQ       P   +QQ+  Q    +++  P
Sbjct: 259 QPQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQQKVRP 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,269
Number of Sequences: 2352
Number of extensions: 13890
Number of successful extensions: 53
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)