Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6d18
(667 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015970-1|AAH15970.1| 99|Homo sapiens LOC84661 protein protein. 103 6e-22
AF226998-1|AAK00640.1| 99|Homo sapiens dpy-30-like protein pro... 103 6e-22
AK057426-1|BAB71480.1| 723|Homo sapiens protein ( Homo sapiens ... 51 4e-06
Y14992-1|CAA75226.1| 212|Homo sapiens nucleoside-diphosphate ki... 44 4e-04
U90450-1|AAC69440.1| 212|Homo sapiens inhibitor of p53-induced ... 44 4e-04
BC026182-1|AAH26182.1| 212|Homo sapiens non-metastatic cells 5,... 44 4e-04
AF067724-1|AAC64358.1| 212|Homo sapiens nm23-H5 protein. 44 4e-04
BC019250-1|AAH19250.1| 177|Homo sapiens DPY30 domain containing... 37 0.074
AL359195-8|CAI13702.1| 80|Homo sapiens DPY30 domain containing... 37 0.074
AL359195-7|CAI13701.1| 153|Homo sapiens DPY30 domain containing... 37 0.074
AL359195-6|CAI13699.1| 177|Homo sapiens DPY30 domain containing... 37 0.074
AK125908-1|BAC86339.1| 184|Homo sapiens protein ( Homo sapiens ... 37 0.074
BC007374-1|AAH07374.1| 177|Homo sapiens DYDC2 protein protein. 33 0.92
AL359195-10|CAI13704.1| 177|Homo sapiens DPY30 domain containin... 33 0.92
AL359195-9|CAI13703.1| 126|Homo sapiens DPY30 domain containing... 33 0.92
AL359195-5|CAI13698.1| 191|Homo sapiens DPY30 domain containing... 33 0.92
AK093378-1|BAC04148.1| 177|Homo sapiens protein ( Homo sapiens ... 33 0.92
BC032725-1|AAH32725.1| 234|Homo sapiens fibronectin type III do... 32 2.1
AY358136-1|AAQ88503.1| 234|Homo sapiens PSGC6389 protein. 32 2.1
AK026015-1|BAB15321.1| 234|Homo sapiens protein ( Homo sapiens ... 32 2.1
AC074117-2|AAY14849.1| 234|Homo sapiens unknown protein. 32 2.1
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 31 3.7
U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein p... 30 6.5
U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein... 30 6.5
U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein p... 30 6.5
BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting p... 30 6.5
BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting p... 30 6.5
BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting p... 30 6.5
BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein. 30 6.5
AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive p... 30 6.5
AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive p... 30 6.5
AL607144-2|CAI40566.1| 348|Homo sapiens KIAA0774 protein. 30 8.5
AL596114-2|CAI39912.1| 348|Homo sapiens KIAA0774 protein. 30 8.5
>BC015970-1|AAH15970.1| 99|Homo sapiens LOC84661 protein protein.
Length = 99
Score = 103 bits (247), Expect = 6e-22
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = +1
Query: 67 QPMSESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLDQT 246
+ M E TQ+ N S + D+V++I+ EK N A + K ++DL +LPTR YLDQT
Sbjct: 4 EQMLEGQTQVAENPH--SEYGLTDNVERIVENEKIN-AEKSSKQKVDLQSLPTRAYLDQT 60
Query: 247 VVPILLQGLSALAKERPPDPINYLAAYLLKNKTTFELAN 363
VVPILLQGL+ LAKERPP+PI +LA+YLLKNK FE N
Sbjct: 61 VVPILLQGLAVLAKERPPNPIEFLASYLLKNKAQFEDRN 99
>AF226998-1|AAK00640.1| 99|Homo sapiens dpy-30-like protein
protein.
Length = 99
Score = 103 bits (247), Expect = 6e-22
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = +1
Query: 67 QPMSESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRIDLNALPTRQYLDQT 246
+ M E TQ+ N S + D+V++I+ EK N A + K ++DL +LPTR YLDQT
Sbjct: 4 EQMLEGQTQVAENPH--SEYGLTDNVERIVENEKIN-AEKSSKQKVDLQSLPTRAYLDQT 60
Query: 247 VVPILLQGLSALAKERPPDPINYLAAYLLKNKTTFELAN 363
VVPILLQGL+ LAKERPP+PI +LA+YLLKNK FE N
Sbjct: 61 VVPILLQGLAVLAKERPPNPIEFLASYLLKNKAQFEDRN 99
>AK057426-1|BAB71480.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ32864 fis, clone TESTI2003625. ).
Length = 723
Score = 50.8 bits (116), Expect = 4e-06
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 106 KEEQSTTKIPDSVKKIILMEKD-NEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSAL 282
+E Q ++ + + + K E + ++ ++P R YL V+P L+QGL+
Sbjct: 640 REHQEAVEMAEKIARWEEWNKRLEEVKREERELLEAQSIPLRNYLMTYVMPTLIQGLNEC 699
Query: 283 AKERPPDPINYLAAYLLKN 339
RP DP+++LA YL KN
Sbjct: 700 CNVRPEDPVDFLAEYLFKN 718
>Y14992-1|CAA75226.1| 212|Homo sapiens nucleoside-diphosphate
kinase protein.
Length = 212
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 226 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 339
+ YL+ ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195
>U90450-1|AAC69440.1| 212|Homo sapiens inhibitor of p53-induced
apoptosis-beta protein.
Length = 212
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 226 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 339
+ YL+ ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195
>BC026182-1|AAH26182.1| 212|Homo sapiens non-metastatic cells 5,
protein expressed in (nucleoside-diphosphate kinase)
protein.
Length = 212
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 226 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 339
+ YL+ ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195
>AF067724-1|AAC64358.1| 212|Homo sapiens nm23-H5 protein.
Length = 212
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 226 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 339
+ YL+ ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195
>BC019250-1|AAH19250.1| 177|Homo sapiens DPY30 domain containing 1
protein.
Length = 177
Score = 36.7 bits (81), Expect = 0.074
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 342
YL + + L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5 YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41
>AL359195-8|CAI13702.1| 80|Homo sapiens DPY30 domain containing 1
protein.
Length = 80
Score = 36.7 bits (81), Expect = 0.074
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 342
YL + + L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5 YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41
>AL359195-7|CAI13701.1| 153|Homo sapiens DPY30 domain containing 1
protein.
Length = 153
Score = 36.7 bits (81), Expect = 0.074
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 342
YL + + L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5 YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41
>AL359195-6|CAI13699.1| 177|Homo sapiens DPY30 domain containing 1
protein.
Length = 177
Score = 36.7 bits (81), Expect = 0.074
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 342
YL + + L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5 YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41
>AK125908-1|BAC86339.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ43920 fis, clone TESTI4012086. ).
Length = 184
Score = 36.7 bits (81), Expect = 0.074
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 342
YL + + L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5 YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41
>BC007374-1|AAH07374.1| 177|Homo sapiens DYDC2 protein protein.
Length = 177
Score = 33.1 bits (72), Expect = 0.92
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
YL + L Q L+ +AK RP DPI YLA +L + T
Sbjct: 5 YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43
>AL359195-10|CAI13704.1| 177|Homo sapiens DPY30 domain containing 2
protein.
Length = 177
Score = 33.1 bits (72), Expect = 0.92
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
YL + L Q L+ +AK RP DPI YLA +L + T
Sbjct: 5 YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43
>AL359195-9|CAI13703.1| 126|Homo sapiens DPY30 domain containing 2
protein.
Length = 126
Score = 33.1 bits (72), Expect = 0.92
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
YL + L Q L+ +AK RP DPI YLA +L + T
Sbjct: 5 YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43
>AL359195-5|CAI13698.1| 191|Homo sapiens DPY30 domain containing 2
protein.
Length = 191
Score = 33.1 bits (72), Expect = 0.92
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
YL + L Q L+ +AK RP DPI YLA +L + T
Sbjct: 19 YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 57
>AK093378-1|BAC04148.1| 177|Homo sapiens protein ( Homo sapiens
cDNA FLJ36059 fis, clone TESTI2018482. ).
Length = 177
Score = 33.1 bits (72), Expect = 0.92
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 232 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
YL + L Q L+ +AK RP DPI YLA +L + T
Sbjct: 5 YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43
>BC032725-1|AAH32725.1| 234|Homo sapiens fibronectin type III
domain containing 4 protein.
Length = 234
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 217 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
+P YL TV+ ++ L + +RPP P+N +L N T
Sbjct: 21 VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64
>AY358136-1|AAQ88503.1| 234|Homo sapiens PSGC6389 protein.
Length = 234
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 217 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
+P YL TV+ ++ L + +RPP P+N +L N T
Sbjct: 21 VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64
>AK026015-1|BAB15321.1| 234|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22362 fis, clone HRC06544. ).
Length = 234
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 217 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
+P YL TV+ ++ L + +RPP P+N +L N T
Sbjct: 21 VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64
>AC074117-2|AAY14849.1| 234|Homo sapiens unknown protein.
Length = 234
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 217 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 348
+P YL TV+ ++ L + +RPP P+N +L N T
Sbjct: 21 VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = -1
Query: 610 LSTIVYICIL*GKLVYIF*SVK**NYKI*AIYTIVIRCLCHQMSVQQNVSSHCFEISYFH 431
+S VY+C+ V ++ SV +Y V C+C +SV + + IS +
Sbjct: 67 ISVCVYLCLCVCVSVCVYVSV--------CMYLCVFLCVCVYVSVSVCLCVY-LHISVYL 117
Query: 430 CLHYNKAILMFVGLLVDYCYCLS 362
C++ + + V L V C CLS
Sbjct: 118 CVYVCICVCVSVSLCVSVCACLS 140
>U74667-1|AAB18236.1| 513|Homo sapiens tat interactive protein
protein.
Length = 513
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 392 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 445
>U67734-1|AAD00163.1| 461|Homo sapiens cPLA2 interacting protein
protein.
Length = 461
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 340 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 393
>U40989-1|AAB02683.1| 482|Homo sapiens tat interactive protein
protein.
Length = 482
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 361 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 414
>BC117167-1|AAI17168.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 392 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 445
>BC093032-1|AAH93032.1| 461|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 461
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 340 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 393
>BC064912-1|AAH64912.1| 513|Homo sapiens HIV-1 Tat interacting
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 392 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 445
>BC000166-1|AAH00166.3| 457|Homo sapiens HTATIP protein protein.
Length = 457
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 336 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 389
>AY214165-1|AAO21130.1| 513|Homo sapiens HIV-1 Tat interactive
protein, 60kDa protein.
Length = 513
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 392 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 445
>AB209813-1|BAD93050.1| 448|Homo sapiens HIV-1 Tat interactive
protein, 60kDa isoform 3 variant protein.
Length = 448
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 157 LMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLA 321
L + + + K DL L R Y QT++ IL+ GL + + ERP IN ++
Sbjct: 327 LSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILM-GLKSESGERPQITINEIS 380
>AL607144-2|CAI40566.1| 348|Homo sapiens KIAA0774 protein.
Length = 348
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 55 LK*LQPMSESSTQINHNKEEQSTTKIPDSVKKIILMEKD----NEANANRKSRIDLNALP 222
+K L+ + E Q H ++E+ ++ VKK I++E+ + N + K+RID N +
Sbjct: 218 MKSLKQVLEMKNQQIH-EQEKKILELEKLVKKNIILEEKIQVLQQQNEDLKARIDQNTVV 276
Query: 223 TRQYLDQ 243
TRQ ++
Sbjct: 277 TRQLSEE 283
>AL596114-2|CAI39912.1| 348|Homo sapiens KIAA0774 protein.
Length = 348
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 55 LK*LQPMSESSTQINHNKEEQSTTKIPDSVKKIILMEKD----NEANANRKSRIDLNALP 222
+K L+ + E Q H ++E+ ++ VKK I++E+ + N + K+RID N +
Sbjct: 218 MKSLKQVLEMKNQQIH-EQEKKILELEKLVKKNIILEEKIQVLQQQNEDLKARIDQNTVV 276
Query: 223 TRQYLDQ 243
TRQ ++
Sbjct: 277 TRQLSEE 283
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,335,642
Number of Sequences: 237096
Number of extensions: 1708619
Number of successful extensions: 3745
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3742
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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