Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt6d08
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.3  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.3  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   9.3  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 242 LFKAYANVMTHPYPPSGGTLYAGALDILV 156
           LF  + N + +  PP G  LYA  + I +
Sbjct: 682 LFSLFINDVCNVLPPDGHLLYADDIKIFL 710


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 354 YWNVVVVLWRTITTTVWIP 410
           YW+ ++ L  TIT  +W P
Sbjct: 141 YWSSMLNLDATITCGIWTP 159


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -1

Query: 551 NVNAAITEATPIEFRILYDKMKTQKLDAKLVNMSPAEIS 435
           NVN A  E  P++   L D  K+ + D  +++   A+++
Sbjct: 162 NVNYAQAEDYPVDLYYLMDLSKSMEDDKTILSTLGADLA 200


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 301 ETGLTPTQGTLVIILNH 351
           + GLTP+   LV + NH
Sbjct: 24  QVGLTPSDAALVFVDNH 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,673
Number of Sequences: 2352
Number of extensions: 12493
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)