Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6d08
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 65 4e-11
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 65 4e-11
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 60 8e-10
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 60 8e-10
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 60 8e-10
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 57 1e-08
AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 34 0.063
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 34 0.063
U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 31 0.77
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 29 3.1
AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical ... 28 5.4
AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical ... 28 5.4
Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 27 9.5
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 27 9.5
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 27 9.5
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 27 9.5
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 64.9 bits (151), Expect = 4e-11
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 190 PPDGGYGWVITFAYALNNVVVLPLISSFGLVFQEAF-DETGLTPTQGTLVIILNHSIGML 366
PPDGGYGWV+ A L N+ V +I + G + + D+ G T G ++ IL L
Sbjct: 39 PPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFGSTSVAGAVISILT-GCYYL 97
Query: 367 LSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMG 522
+ FG R VA G+IL + +L+ AS+ W L + +L +G
Sbjct: 98 AGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWELYLLFGVLGGIG 149
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 64.9 bits (151), Expect = 4e-11
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +1
Query: 190 PPDGGYGWVITFAYALNNVVVLPLISSFGLVFQEAF-DETGLTPTQGTLVIILNHSIGML 366
PPDGGYGWV+ A L N+ V +I + G + + D+ G T G ++ IL L
Sbjct: 39 PPDGGYGWVVVAASFLVNMAVDGVIYTCGKILVPIWADQFGSTSVAGAVISILT-GCYYL 97
Query: 367 LSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMG 522
+ FG R VA G+IL + +L+ AS+ W L + +L +G
Sbjct: 98 AGPLASSFVNVFGIRSVAIAGSILATTAFLLSRFASTIWELYLLFGVLGGIG 149
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 60.5 bits (140), Expect = 8e-10
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +1
Query: 193 PDGGYGWVITFAYALNNVVV---LPLISSFGLVFQEAFDET-GLTPTQGTLVIILNHSIG 360
PDGGYGWVI FA ++N+VV S F ++E + E+ GLT G+L+I +G
Sbjct: 70 PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGTYLLVG 129
Query: 361 MLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMGVASV 534
L+S L ++ R V G ++ ++ + + +VF+L Y ++ +G +
Sbjct: 130 PLVS----ALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLGFGMI 183
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 60.5 bits (140), Expect = 8e-10
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +1
Query: 193 PDGGYGWVITFAYALNNVVV---LPLISSFGLVFQEAFDET-GLTPTQGTLVIILNHSIG 360
PDGGYGWVI FA ++N+VV S F ++E + E+ GLT G+L+I +G
Sbjct: 15 PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGTYLLVG 74
Query: 361 MLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMGVASV 534
L+S L ++ R V G ++ ++ + + +VF+L Y ++ +G +
Sbjct: 75 PLVS----ALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLGFGMI 128
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 60.5 bits (140), Expect = 8e-10
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +1
Query: 193 PDGGYGWVITFAYALNNVVV---LPLISSFGLVFQEAFDET-GLTPTQGTLVIILNHSIG 360
PDGGYGWVI FA ++N+VV S F ++E + E+ GLT G+L+I +G
Sbjct: 70 PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQSYKERYQESDGLTVFIGSLIIGTYLLVG 129
Query: 361 MLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMGVASV 534
L+S L ++ R V G ++ ++ + + +VF+L Y ++ +G +
Sbjct: 130 PLVS----ALCNKYEQRYVVMAGGLISGIAFMIAPASPNIYVFMLIYGVMGGLGFGMI 183
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 59.7 bits (138), Expect = 1e-09
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Frame = +1
Query: 190 PPDGGYGWVITFAYALNNVVVLPLISSFGLVFQEAFDET-GLTPTQGTLVIILNHSIGML 366
PPDGGYGW I A L N++V +I + G + Q A+ + G++ + + SI
Sbjct: 33 PPDGGYGWAIVAASFLLNMIVDGVIFTVGKILQPAWVHSFGISEASAAMTM----SILSG 88
Query: 367 LSFFGGP----LLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMGVASV 534
FF GP L FG R+VA G+++ + G +L+ A + +V +S+ ++ G +
Sbjct: 89 CYFFAGPIASVLCNVFGCRQVALAGSLIAALGFLLSISAPNIYVLYVSFGLIAGAGFGMM 148
Query: 535 MAAFTLAINSF 567
+ I+ +
Sbjct: 149 YLPAIVIISQY 159
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/116 (23%), Positives = 54/116 (46%)
Frame = +1
Query: 187 VPPDGGYGWVITFAYALNNVVVLPLISSFGLVFQEAFDETGLTPTQGTLVIILNHSIGML 366
+PPDGG+GWV+ +V + SFG++ ++ E T +L++ + +
Sbjct: 13 LPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTGFTLG 72
Query: 367 LSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMGVASV 534
+ ++G R +GA + G +L+ A+ W F++S ++ +G V
Sbjct: 73 AGPLASAVCNKYGCRITTIIGAGVAFVGCLLSCFATEIWHFVISVGVIMGIGFGLV 128
>AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical
protein C10E2.6 protein.
Length = 594
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/112 (23%), Positives = 51/112 (45%)
Frame = +1
Query: 187 VPPDGGYGWVITFAYALNNVVVLPLISSFGLVFQEAFDETGLTPTQGTLVIILNHSIGML 366
+PPDGG+GWV+ +V + SFG++ + +E + T L+I L + +
Sbjct: 16 LPPDGGWGWVVVLGSFFVHVFADGFVYSFGVLVETLMEEFHASNTMAALIISLLTGLTLG 75
Query: 367 LSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMG 522
+ ++G R GA + G L+ A++ W +++ ++ G
Sbjct: 76 SGPLASAVCNKYGCRITTITGAGVAFVGCALSYFATAMWHIVITVGVIMGTG 127
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = +1
Query: 163 MSNAPAYKVPPDGGYGWVITFAYALNNVVVLPLISSFGLVF---QEAFDETGLTPTQGTL 333
++ P YK DGGYGW++ A L + V FG+VF QE F + G + T
Sbjct: 60 LTERPVYK---DGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEHF-QCGRFVSMITA 115
Query: 334 VIILNHSIGMLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILN 513
+ L S+ +++S G + G R +GA + + I+ S + F++S+ +
Sbjct: 116 SMFL--SLPLIMSPVAGIVSDILGCRMSIIIGASICTVSCIIAMFCSHIFFFMISFGLGC 173
Query: 514 SMGVASVMAAFTLAINSF 567
+G++ + A + + +
Sbjct: 174 GVGMSFIYNAAIVIVTYY 191
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.063
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +1
Query: 301 ETGLTPTQGTLVIILNHSIGMLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSF 480
E G++ Q LV S ML S F G + RFG RK ++ +++ ++ F
Sbjct: 113 EWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHF 172
Query: 481 WVFILSYSILNSMGVASVMAAFTL 552
+V +L + L G+ V + TL
Sbjct: 173 YV-LLFFRGLTGFGIGGVPQSVTL 195
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.063
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +1
Query: 301 ETGLTPTQGTLVIILNHSIGMLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSF 480
E G++ Q LV S ML S F G + RFG RK ++ +++ ++ F
Sbjct: 113 EWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHF 172
Query: 481 WVFILSYSILNSMGVASVMAAFTL 552
+V +L + L G+ V + TL
Sbjct: 173 YV-LLFFRGLTGFGIGGVPQSVTL 195
>U40952-1|AAK68681.3| 436|Caenorhabditis elegans Hypothetical
protein C03B1.13 protein.
Length = 436
Score = 33.1 bits (72), Expect = 0.14
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 208 GWVITFAYALNNVVVLPLISSFGLVFQEAFDETGLTPTQGTLVIILNHSIGMLLSF---F 378
G ++ +YA ++ SS L+ +E + + T T I+++ +G++L F F
Sbjct: 213 GAIVAASYAFTGDDLIDTFSSNMLIGEEKSSKK-IHQTTDTFTILVSDGLGLVLFFASLF 271
Query: 379 GGPLLRRFGYRKVAAVG 429
G L RFG RK+ VG
Sbjct: 272 GIYLADRFGRRKLVLVG 288
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = -1
Query: 566 NELIANVNAAITEATPIEFRILYDKMKTQKLDAKLVNMSPAEISIAPTAATFRYPNRRSN 387
+EL A ++ ++E T EF + + + +DA + + ++SI T A F + R N
Sbjct: 74 SELAAALSVDLSEIT--EF---LESLDRRNVDAIISDSPLDDVSILQTTAAFSFKPRFVN 128
Query: 386 GPPK 375
GPPK
Sbjct: 129 GPPK 132
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 506 ILYDKMKTQKLDAKLVNMSPAEISIAPTAATFRYPNRRSNG 384
+ YD QKL L++ S A ++ A T R+P +R+ G
Sbjct: 60 VTYDDPNVQKLFKSLMSGSRAALASAITLVESRHPTKRAQG 100
>AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical
protein C01B4.8 protein.
Length = 478
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 358 GMLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVF-ILSYSILNSMGVASV 534
G+L PL+ R G R V ++ + G IL LA + F +L L +G++ V
Sbjct: 97 GLLGLLIAMPLMHRVGVRLVLSICGVFSILGTILFPLAVEWNFFSVLVVRFLQGLGISMV 156
>AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical
protein Y19D10A.5 protein.
Length = 478
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 358 GMLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVF-ILSYSILNSMGVASV 534
G+L PL+ R G R V ++ + G IL LA + F +L L +G++ V
Sbjct: 97 GLLGLLIAMPLMHRVGVRLVLSICGVFSILGTILFPLAVEWNFFSVLVVRFLQGLGISMV 156
>Z92838-4|CAB07410.1| 1012|Caenorhabditis elegans Hypothetical
protein T03D8.5 protein.
Length = 1012
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 219 DDPSVSSVWRHLVRRCVRHLGTFTTLQIT-SLKYTLNKNHCNSTFYL 82
D P++ S+WR+ R ++ + +LQ+ KY+L ++ ++ +YL
Sbjct: 554 DSPTLISIWRYCSRGSLQDVIAKGSLQMDWFFKYSLMRDVADAIYYL 600
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 257 GRTTTLFKAYANVMTHPYPPSGGTLYAGALDI 162
GRT + + AN++ YP + GT+Y +DI
Sbjct: 1151 GRTGSGKSSLANLIFRLYPVTNGTIYIDGVDI 1182
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 257 GRTTTLFKAYANVMTHPYPPSGGTLYAGALDI 162
GRT + + AN++ YP + GT+Y +DI
Sbjct: 1124 GRTGSGKSSLANLIFRLYPVTNGTIYIDGVDI 1155
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 521 PIEFRILYDKMKTQKLDAKLVNMSPAEISIAPTAATFRYPNRRSNGPPKND 369
P+E+R + +K K D KL+ S ++ + +FR + NG ND
Sbjct: 293 PLEYRCV-NKAAPLKRDEKLITCSLKNSLLSSVSTSFRSLKKSENGSDIND 342
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 257 GRTTTLFKAYANVMTHPYPPSGGTLYAGALDI 162
GRT + + AN++ YP + GT+Y +DI
Sbjct: 1151 GRTGSGKSSLANLIFRLYPVTNGTIYIDGVDI 1182
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 257 GRTTTLFKAYANVMTHPYPPSGGTLYAGALDI 162
GRT + + AN++ YP + GT+Y +DI
Sbjct: 1124 GRTGSGKSSLANLIFRLYPVTNGTIYIDGVDI 1155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,673,979
Number of Sequences: 27780
Number of extensions: 266634
Number of successful extensions: 708
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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