Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6c19
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical ... 252 2e-67
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 252 2e-67
AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 37 0.012
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 37 0.012
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 37 0.012
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 29 3.2
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 29 4.3
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical ... 28 7.5
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 9.9
Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical pr... 27 9.9
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 27 9.9
>AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical
protein F46E10.10b protein.
Length = 273
Score = 252 bits (616), Expect = 2e-67
Identities = 124/207 (59%), Positives = 152/207 (73%), Gaps = 1/207 (0%)
Frame = +1
Query: 79 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 258
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 259 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKVA 438
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 439 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 615
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 616 RVIIWGNHSSTQFPDASNAVAIVGGAQ 696
VIIWGNHS TQFPD ++A G +
Sbjct: 181 NVIIWGNHSGTQFPDVTHATVNKNGTE 207
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 252 bits (616), Expect = 2e-67
Identities = 124/207 (59%), Positives = 152/207 (73%), Gaps = 1/207 (0%)
Frame = +1
Query: 79 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 258
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 259 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKVA 438
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 439 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 615
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 616 RVIIWGNHSSTQFPDASNAVAIVGGAQ 696
VIIWGNHS TQFPD ++A G +
Sbjct: 181 NVIIWGNHSGTQFPDVTHATVNKNGTE 207
>AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical
protein F46E10.10c protein.
Length = 181
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +1
Query: 541 MTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSSTQFPDASNAVAIVGGAQ 696
MTRLD NRA +QLA K G + +VK VIIWGNHS TQFPD ++A G +
Sbjct: 1 MTRLDHNRALAQLALKTGTTIGNVKNVIIWGNHSGTQFPDVTHATVNKNGTE 52
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 37.1 bits (82), Expect = 0.012
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 352 RKEGMERKDLLAANVRIFKEQGQALDKVARKDVKVLVVGNPANTNALICSKYAPSIPKEN 531
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 532 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 648
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 37.1 bits (82), Expect = 0.012
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 352 RKEGMERKDLLAANVRIFKEQGQALDKVARKDVKVLVVGNPANTNALICSKYAPSIPKEN 531
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 532 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 648
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 37.1 bits (82), Expect = 0.012
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 352 RKEGMERKDLLAANVRIFKEQGQALDKVARKDVKVLVVGNPANTNALICSKYAPSIPKEN 531
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 532 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 648
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 111 CCRTNCILTSLSNCVWSSFWTSATCLPPPS*YCAYDGCT*RCCHGVG*LCSATFGWGSS 287
C + + S N + ++A+ P + YC YDG T CC CS ++ G+S
Sbjct: 470 CIQGTALTDSNGNFIICGGSSAASTTCPANHYCYYDGTTYGCCPTQAYTCSLSYKSGAS 528
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = -1
Query: 467 PTTRTFTSLRAT-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 303
P RT RAT L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 302 SGFAVGRTPAKSGRAQSANSMTTPSSTP 219
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = -1
Query: 467 PTTRTFTSLRAT-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 303
P RT RAT L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 302 SGFAVGRTPAKSGRAQSANSMTTPSSTP 219
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Frame = -1
Query: 467 PTTRTFTSLRAT-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 303
P RT RAT L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 302 SGFAVGRTPAKSGRAQSANSMTTPSSTP 219
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -1
Query: 470 LPTTRTF--TSLRATLSKAWPCSLKMRTLAARRSF 372
LPTT+ F TS T+ + W C + + L+++RS+
Sbjct: 42 LPTTQKFRQTSNGRTMKQTWTCGVCRKELSSKRSY 76
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 409 EQGQALDKVARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 588
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 409 EQGQALDKVARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 588
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +1
Query: 403 FKEQGQALDKVARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTR 549
F + G + K+ + V+ N N IC YAP + MT+
Sbjct: 192 FMQNGSSQTKIVASEKSASVINEKVNHNCNICVVYAPVAATTHVCTMTK 240
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +1
Query: 403 FKEQGQALDKVARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTR 549
F + G + K+ + V+ N N IC YAP + MT+
Sbjct: 192 FMQNGSSQTKIVASEKSASVINEKVNHNCNICVVYAPVAATTHVCTMTK 240
>AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical
protein W02D7.3 protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 302 SGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAISRRWRKTGC 177
+ +A +P S ++S S + S+TP A+SRR GC
Sbjct: 71 TNYAKRHSPPPSYSSRSKQSSVSSSATPTKSAVSRRNYLAGC 112
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.9
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = -1
Query: 467 PTTRTFTSLRATLS-KAWPCSLKMRTLAARRSFLSIPSFLGIAPTRKAAATSLKASSGFA 291
P TRT RAT KA P S P A KA + K +G
Sbjct: 344 PATRTAVPPRATAPPKAAPASKAPTRAPIPARSAPAPPRGAPAKAPKAEPIAQKKVAGKV 403
Query: 290 VGRTPAKSGRAQSANSMTTPSST 222
P+K A SA T P+ST
Sbjct: 404 QRAAPSKPASAVSAPKATAPAST 426
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 27.5 bits (58), Expect = 9.9
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -1
Query: 467 PTTRTFTSLRATLSKAWPCSLKMRTLAARRSFLSIPSFLGIAPTR--KAAATSLKASSGF 294
P TRT RAT S + A S P+ AP + KA A + K +G
Sbjct: 366 PATRTAVPPRATAPPK-AASASKAPIRAPIPAKSAPAPPRGAPAKAAKAEAIAQKKVAGK 424
Query: 293 AVGRTPAKSGRAQSANSMTTPSST 222
P+K A SA T P+ST
Sbjct: 425 VQRAAPSKPASAVSAPKATAPAST 448
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 9.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -3
Query: 291 CRKNPSQKWQSTVSQLHDNTFK 226
C K+P ++WQ + +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 9.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -3
Query: 291 CRKNPSQKWQSTVSQLHDNTFK 226
C K+P ++WQ + +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 9.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = -3
Query: 291 CRKNPSQKWQSTVSQLHDNTFK 226
C K+P ++WQ + +H++T++
Sbjct: 3689 CAKSPCEQWQLCIPSVHNSTYE 3710
>Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical
protein C38C10.3 protein.
Length = 301
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 390 SSKKILPLHTFLSGH 346
SSKK LP +T+LSGH
Sbjct: 172 SSKKSLPTYTYLSGH 186
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 249 QLHDNTFKYTHHRRNIKKVEEDRLLRSKNCS 157
++HD Y R +K++EE RLL K+CS
Sbjct: 184 KVHDGD--YMKAARQVKELEECRLLHKKDCS 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,171,435
Number of Sequences: 27780
Number of extensions: 348555
Number of successful extensions: 1208
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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