Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt6c17
(704 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M32637-1|AAA28511.1| 199|Drosophila melanogaster protein ( D.me... 133 2e-31
M31902-1|AAA28509.1| 199|Drosophila melanogaster protein ( D.me... 133 2e-31
M31900-1|AAA28510.1| 199|Drosophila melanogaster protein ( D.me... 133 2e-31
AY069405-1|AAL39550.1| 199|Drosophila melanogaster LD10532p pro... 133 2e-31
AE014296-136|AAF47413.2| 199|Drosophila melanogaster CG1007-PA ... 133 2e-31
AE014298-1396|AAX52484.1| 150|Drosophila melanogaster CG33557-P... 38 0.010
BT022167-1|AAY51561.1| 167|Drosophila melanogaster IP01307p pro... 34 0.22
AL031766-3|CAA21133.1| 167|Drosophila melanogaster EG:84H4.2,FB... 34 0.22
AE014298-653|AAF45967.1| 167|Drosophila melanogaster CG3052-PA ... 34 0.22
L20770-1|AAA18517.1| 162|Drosophila melanogaster helix-loop-hel... 33 0.38
X95845-1|CAA65103.1| 398|Drosophila melanogaster tap protein. 33 0.50
AY119146-1|AAM51006.1| 398|Drosophila melanogaster RE52048p pro... 33 0.50
AF022883-1|AAC80572.1| 398|Drosophila melanogaster basic helix-... 33 0.50
AE014296-2893|AAF49352.1| 398|Drosophila melanogaster CG7659-PA... 33 0.50
AY071350-1|AAL48972.1| 198|Drosophila melanogaster RE38860p pro... 31 1.5
AE013599-2352|AAF57948.2| 246|Drosophila melanogaster CG5550-PA... 31 1.5
BT029259-1|ABK30896.1| 812|Drosophila melanogaster FI01119p pro... 30 3.5
BT021363-1|AAX33511.1| 712|Drosophila melanogaster LP11437p pro... 30 3.5
AY094965-1|AAM11318.1| 812|Drosophila melanogaster SD07008p pro... 30 3.5
AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA... 30 3.5
AE014134-3153|ABC65908.1| 776|Drosophila melanogaster CG10462-P... 30 3.5
AE014134-3152|ABC65907.1| 776|Drosophila melanogaster CG10462-P... 30 3.5
AE014134-3151|AAF53838.2| 812|Drosophila melanogaster CG10462-P... 30 3.5
>M32637-1|AAA28511.1| 199|Drosophila melanogaster protein (
D.melanogaster extramacrochaetaeprotein gene, exon 2. ).
Length = 199
Score = 133 bits (322), Expect = 2e-31
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%)
Frame = +1
Query: 88 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 249
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 250 KLEVIQHVIDYICDLQSALENHPAVGQFDA 339
KLE+IQHVIDYICDLQ+ LE HP +G FDA
Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90
>M31902-1|AAA28509.1| 199|Drosophila melanogaster protein (
D.melanogaster extramacrochaetae(emc) protein mRNA,
complete cds. ).
Length = 199
Score = 133 bits (322), Expect = 2e-31
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%)
Frame = +1
Query: 88 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 249
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 250 KLEVIQHVIDYICDLQSALENHPAVGQFDA 339
KLE+IQHVIDYICDLQ+ LE HP +G FDA
Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90
>M31900-1|AAA28510.1| 199|Drosophila melanogaster protein (
D.melanogaster extramacrochaetae(emc) protein gene, exon
2. ).
Length = 199
Score = 133 bits (322), Expect = 2e-31
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%)
Frame = +1
Query: 88 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 249
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 250 KLEVIQHVIDYICDLQSALENHPAVGQFDA 339
KLE+IQHVIDYICDLQ+ LE HP +G FDA
Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90
>AY069405-1|AAL39550.1| 199|Drosophila melanogaster LD10532p
protein.
Length = 199
Score = 133 bits (322), Expect = 2e-31
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%)
Frame = +1
Query: 88 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 249
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 250 KLEVIQHVIDYICDLQSALENHPAVGQFDA 339
KLE+IQHVIDYICDLQ+ LE HP +G FDA
Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90
>AE014296-136|AAF47413.2| 199|Drosophila melanogaster CG1007-PA
protein.
Length = 199
Score = 133 bits (322), Expect = 2e-31
Identities = 65/90 (72%), Positives = 78/90 (86%), Gaps = 6/90 (6%)
Frame = +1
Query: 88 MKAITAVCATGAS-VPAI-ASGRVQRHR----DGENAEIQMYLSKLQDLVPFMPKNRKIS 249
MK++TAVC TGAS +PA+ ASGR+QRH DGENAE++MYLSKL+DLVPFMPKNRK++
Sbjct: 1 MKSLTAVCQTGASGMPALNASGRIQRHPTHRGDGENAEMKMYLSKLKDLVPFMPKNRKLT 60
Query: 250 KLEVIQHVIDYICDLQSALENHPAVGQFDA 339
KLE+IQHVIDYICDLQ+ LE HP +G FDA
Sbjct: 61 KLEIIQHVIDYICDLQTELETHPEMGNFDA 90
>AE014298-1396|AAX52484.1| 150|Drosophila melanogaster CG33557-PA
protein.
Length = 150
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 205 LQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 309
L++L+P P NRK+SK+E+I+ YI L S LE
Sbjct: 84 LRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLE 118
>BT022167-1|AAY51561.1| 167|Drosophila melanogaster IP01307p
protein.
Length = 167
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +1
Query: 199 SKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 309
++L+ L+P +P ++K+SK+E+++ I YI L LE
Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165
>AL031766-3|CAA21133.1| 167|Drosophila melanogaster
EG:84H4.2,FBgn0011277;HLH4C protein.
Length = 167
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +1
Query: 199 SKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 309
++L+ L+P +P ++K+SK+E+++ I YI L LE
Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165
>AE014298-653|AAF45967.1| 167|Drosophila melanogaster CG3052-PA
protein.
Length = 167
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +1
Query: 199 SKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 309
++L+ L+P +P ++K+SK+E+++ I YI L LE
Sbjct: 129 AELRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 165
>L20770-1|AAA18517.1| 162|Drosophila melanogaster helix-loop-helix
protein protein.
Length = 162
Score = 33.1 bits (72), Expect = 0.38
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 163 RDGENAE-IQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALE 309
R+G E + + ++ L+P +P ++K+SK+E+++ I YI L LE
Sbjct: 111 REGIRVEAFNVSFADVRKLLPTLPPDKKLSKIEILKLAICYIAYLNHVLE 160
>X95845-1|CAA65103.1| 398|Drosophila melanogaster tap protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.50
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +1
Query: 196 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 312
L KL+ +P +P+ K++K+E+++ +YI L+ LE+
Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212
>AY119146-1|AAM51006.1| 398|Drosophila melanogaster RE52048p
protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.50
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +1
Query: 196 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 312
L KL+ +P +P+ K++K+E+++ +YI L+ LE+
Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212
>AF022883-1|AAC80572.1| 398|Drosophila melanogaster basic
helix-loop-helix neuraltranscription factor BIPAROUS
protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.50
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +1
Query: 196 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 312
L KL+ +P +P+ K++K+E+++ +YI L+ LE+
Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212
>AE014296-2893|AAF49352.1| 398|Drosophila melanogaster CG7659-PA
protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.50
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +1
Query: 196 LSKLQDLVPFMPKNRKISKLEVIQHVIDYICDLQSALEN 312
L KL+ +P +P+ K++K+E+++ +YI L+ LE+
Sbjct: 174 LEKLRVTLPSLPEETKLTKIEILRFAHNYIFALEQVLES 212
>AY071350-1|AAL48972.1| 198|Drosophila melanogaster RE38860p
protein.
Length = 198
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 88 MKAIT-AVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVI 264
MK I A+C + +AS + GEN +IQ Y PK + K++V
Sbjct: 1 MKPICFALCVFSLGLFYLASAEI-----GENVKIQTYKKYSSSCKELNPKKSGVQKIQVG 55
Query: 265 QHVIDYICDLQSA 303
VI+ CD+ A
Sbjct: 56 SDVIEVYCDVTIA 68
>AE013599-2352|AAF57948.2| 246|Drosophila melanogaster CG5550-PA
protein.
Length = 246
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 88 MKAIT-AVCATGASVPAIASGRVQRHRDGENAEIQMYLSKLQDLVPFMPKNRKISKLEVI 264
MK I A+C + +AS + GEN +IQ Y PK + K++V
Sbjct: 1 MKPICFALCVFSLGLFYLASAEI-----GENVKIQTYKKYSSSCKELNPKKSGVQKIQVG 55
Query: 265 QHVIDYICDLQSA 303
VI+ CD+ A
Sbjct: 56 SDVIEVYCDVTIA 68
>BT029259-1|ABK30896.1| 812|Drosophila melanogaster FI01119p
protein.
Length = 812
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 108 HCCYRFHLESLNTNTG*KCRVATRYVLIARVLSEES 1
HC +R HL + + T KC V ++ +++LS++S
Sbjct: 524 HCAFRAHLTNKHDLTDEKCNVLKVVLMPSKILSQDS 559
>BT021363-1|AAX33511.1| 712|Drosophila melanogaster LP11437p
protein.
Length = 712
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 108 HCCYRFHLESLNTNTG*KCRVATRYVLIARVLSEES 1
HC +R HL + + T KC V ++ +++LS++S
Sbjct: 424 HCAFRAHLTNKHDLTDEKCNVLKVVLMPSKILSQDS 459
>AY094965-1|AAM11318.1| 812|Drosophila melanogaster SD07008p
protein.
Length = 812
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 108 HCCYRFHLESLNTNTG*KCRVATRYVLIARVLSEES 1
HC +R HL + + T KC V ++ +++LS++S
Sbjct: 524 HCAFRAHLTNKHDLTDEKCNVLKVVLMPSKILSQDS 559
>AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA
protein.
Length = 327
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 351 SVATLRSVAAAPPSEETARPSPYAQHHPP-QITLHTRTQKSNGTRKTKPT 497
+VA L S +APP E P + PP ++ L KSNG++ + T
Sbjct: 30 TVAPLTSSTSAPPKMEVKPTKPMIVNAPPKKVQLTEAAPKSNGSKPLQVT 79
>AE014134-3153|ABC65908.1| 776|Drosophila melanogaster CG10462-PC,
isoform C protein.
Length = 776
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 108 HCCYRFHLESLNTNTG*KCRVATRYVLIARVLSEES 1
HC +R HL + + T KC V ++ +++LS++S
Sbjct: 488 HCAFRAHLTNKHDLTDEKCNVLKVVLMPSKILSQDS 523
>AE014134-3152|ABC65907.1| 776|Drosophila melanogaster CG10462-PB,
isoform B protein.
Length = 776
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 108 HCCYRFHLESLNTNTG*KCRVATRYVLIARVLSEES 1
HC +R HL + + T KC V ++ +++LS++S
Sbjct: 488 HCAFRAHLTNKHDLTDEKCNVLKVVLMPSKILSQDS 523
>AE014134-3151|AAF53838.2| 812|Drosophila melanogaster CG10462-PA,
isoform A protein.
Length = 812
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 108 HCCYRFHLESLNTNTG*KCRVATRYVLIARVLSEES 1
HC +R HL + + T KC V ++ +++LS++S
Sbjct: 524 HCAFRAHLTNKHDLTDEKCNVLKVVLMPSKILSQDS 559
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,030,787
Number of Sequences: 53049
Number of extensions: 592879
Number of successful extensions: 2180
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -